Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone3ag1517 ATGGTAAATCATGCAAGTGCCAAAGTTGTTTCTCAGCAGCGGCCGGAGGACCTATTGTCATTCACGCACTACCTTCGTACATGTCCTGCTGCGGAGGGCATCATCCATAGGAAAGTGCTTGCCTGGATTAAGAAGGATCCTACTTTGGCTGCTGCCATCATTCGATTGCATTTCCACGACTGTGCTGTCAGGGGATGCGACGCATCAGTTTTGCTAAATCATCGAGGAAGTGAAAGAAAAGCAGTTGCGAGCAAAACCCTGAGAGGATTCGAATTGATCGATGACATCAAGGCAGAGCTTGAGAGGAAGTGTCCGAGAACAGTGTCTTGCTCGGACATTCTGACAGCGGCTGCAAGAGACGCCACCATCTTTGCTGGAGGGCCCTTCTGGGAAGTCCCATTCGGTCGCAAGGATGGCAGAATCTCATTGGCTGCAGAAGCCGAAACAGTTCCACAGGGCCATGAGAACATAAACTCTTTGATTGAATACTTCAGAGTTAGAGGGCTGGATGTACTGGACCTGGTGACTCTGTCAGGGGCACACACAATCGGGAGATGTGCTTGCGAAACGGTGCACGACAGGATACATGGCTACAATGAAACTGGGAAGCCTGATCCCCTCCTCACTCCAAGCTTTCTGAAATTGCTAAGGTCAAGGTGTAGGAACTATAACAACAGTATATTTCTGGATGTCATAACGCCAAGGACCTTTGACACCGTTTACTACACAAATCTACAGAGGAAGGTGGGACTCTTAGCTACGGACCAAGCGCTGTACTCGGATGCAAGAACGGCTCCCTTTGTAGACATAATGGCTTCTCAACCCTTCCTTTTCAGCAGCCAGTTTTCAACATCCATGGTCAAGCTAGGAAACGTGGGAGTCCTCACCAGAAAGAATGAAGGAGAGATTCGGAGGAACTGCAATTTTGTCAACTAG 936 48.93 MVNHASAKVVSQQRPEDLLSFTHYLRTCPAAEGIIHRKVLAWIKKDPTLAAAIIRLHFHDCAVRGCDASVLLNHRGSERKAVASKTLRGFELIDDIKAELERKCPRTVSCSDILTAAARDATIFAGGPFWEVPFGRKDGRISLAAEAETVPQGHENINSLIEYFRVRGLDVLDLVTLSGAHTIGRCACETVHDRIHGYNETGKPDPLLTPSFLKLLRSRCRNYNNSIFLDVITPRTFDTVYYTNLQRKVGLLATDQALYSDARTAPFVDIMASQPFLFSSQFSTSMVKLGNVGVLTRKNEGEIRRNCNFVN 311
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 33696351 33697385 - Conep03aG0203500.1 Cone3ag1517 434976
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone3ag1517 311 ProSiteProfiles Plant heme peroxidase family profile. 18 311 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone3ag1517 311 PANTHER PEROXIDASE 25-RELATED 22 307 IPR000823 GO:0004601(PANTHER)|GO:0004601(InterPro)|GO:0006950(PANTHER)|GO:0006979(InterPro)|GO:0009505(PANTHER)|GO:0009506(PANTHER)|GO:0020037(InterPro)
Cone3ag1517 311 SUPERFAMILY Heme-dependent peroxidases 19 311 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone3ag1517 311 Gene3D - 24 311 - -
Cone3ag1517 311 Gene3D Peroxidase, domain 2 151 292 - -
Cone3ag1517 311 PRINTS Plant peroxidase signature 107 117 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone3ag1517 311 PRINTS Plant peroxidase signature 284 297 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone3ag1517 311 PRINTS Plant peroxidase signature 126 141 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone3ag1517 311 PRINTS Plant peroxidase signature 228 243 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone3ag1517 311 PRINTS Plant peroxidase signature 244 261 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone3ag1517 311 PRINTS Plant peroxidase signature 52 72 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone3ag1517 311 PRINTS Plant peroxidase signature 28 47 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone3ag1517 311 PRINTS Plant peroxidase signature 88 101 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone3ag1517 311 PRINTS Plant peroxidase signature 172 184 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone3ag1517 311 FunFam Peroxidase 151 289 - -
Cone3ag1517 311 CDD secretory_peroxidase 19 310 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Cone3ag1517 311 ProSitePatterns Peroxidases active site signature. 50 61 IPR019794 GO:0004601(InterPro)
Cone3ag1517 311 FunFam Peroxidase 22 162 - -
Cone3ag1517 311 Pfam Peroxidase 37 273 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone3ag1517 311 ProSitePatterns Peroxidases proximal heme-ligand signature. 173 183 IPR019793 -
Cone3ag1517 311 PRINTS Haem peroxidase superfamily signature 173 188 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone3ag1517 311 PRINTS Haem peroxidase superfamily signature 126 138 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone3ag1517 311 PRINTS Haem peroxidase superfamily signature 108 125 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone3ag1517 311 PRINTS Haem peroxidase superfamily signature 230 245 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone3ag1517 311 PRINTS Haem peroxidase superfamily signature 50 64 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone1ag0365 Cone-Chr1:3039286 Cone3ag1517 Cone-Chr3:33696351 5.79E-133 dispersed
Cone3ag1517 Cone-Chr3:33696351 Cone5ag1379 Cone-Chr5:8424671 1.38E-128 dispersed
Cone10ag1452 Cone-Chr10:11282388 Cone3ag1517 Cone-Chr3:33696351 7.40E-221 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone3ag1517 K00430 - csv:101204209 458.373