Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone4ag0006 ATGAGAGAAGCTTATCGGGTGGAGAAAGATGAGAGAGAGGAGAAGCTATTGGTCTCTGAATACATCCCAAAAGGCAGCTTGTTGTACTTATTGCACGGTGATCATGGGATTCATCATGCAACGCTCAACTGGCCTACTCGGTTAAAGATGATACAGGGGATAGCCCGAGGGATGGAGTTCATTCATACCGAGTTTGCTACGAGTGAACAACCCCATGGAAATCTCAAGTCGAGCAATGTACTTCTGGATGAAGAAAATGAGCCTCTCCTCAGTGATTATGGCTTTCACTCTCTAATCACCCCCAATGTCGCTGCAAATGCCATGTTTGCTTACAGATCTCCAGAATTTATACAGTACCAGCGGGTGTGTCCGAAATCTGATGTCTACTGCATGGGAATAGTCATTCTAGAAATCCTAACGGGAAAATTCACGAGTCAATTCCAGAAATGA 450 44.67 MREAYRVEKDEREEKLLVSEYIPKGSLLYLLHGDHGIHHATLNWPTRLKMIQGIARGMEFIHTEFATSEQPHGNLKSSNVLLDEENEPLLSDYGFHSLITPNVAANAMFAYRSPEFIQYQRVCPKSDVYCMGIVILEILTGKFTSQFQK 149
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 52645 53174 + Conep04aG0000600.1 Cone4ag0006 434984
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone4ag0006 149 Pfam Protein kinase domain 12 145 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone4ag0006 149 ProSiteProfiles Protein kinase domain profile. 1 149 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone4ag0006 149 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 11 146 IPR046959 -
Cone4ag0006 149 Gene3D Transferase(Phosphotransferase) domain 1 4 148 - -
Cone4ag0006 149 SUPERFAMILY Protein kinase-like (PK-like) 9 143 IPR011009 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone4ag0006 Cone-Chr4:52645 Cone4ag0900 Cone-Chr4:7075286 5.05E-57 dispersed
Cone4ag0006 Cone-Chr4:52645 Cone7ag0011 Cone-Chr7:60050 3.05E-78 wgd
Cone4ag0006 Cone-Chr4:52645 Cone7ag0796 Cone-Chr7:5641062 1.89E-35 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
82715 None None None None Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone4ag0006 K28077 - csv:101215919 210.69