Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone4ag0017 ATGGCCAGATCCTGCTTTCTTCCCATCCTTCTTCTTCTTGCTTATGTCTCCGGCGCAGTAATGGCAGCCAAGAAAACCTACATTGTACACATGAAAAACCATGCCAAGCCTTCCTCCTACGCCACCTACCATGACTGGTACTCAGCTCATCTCCAATCTCTCGATTCCCAACTCTTCTACTCCTACACCACCGCCTATCAAGGCTTCGCTGCCCCTCTCGATCCTGCTCAAGCAGCCTCCCTTCGCCAATCCGATTCAGTTCTCGGCGTCTACGAGGACACAGTTTACAACCTCCACACTACACGCACCCCTGAGTTCCTCGGCCTCGACCCTCAGTTTGGTCTCTGGCAAGGTCACAATGCGCAGGGCCTTGACCAAGCTTCCCATGACGTCATCATCGGAGTCCTCGACACCGGAGTCTGGCCGGAGTCCAAGAGCTTCGACGACTACGGTATGCCTGAGATCCCCACCCGTTGGAGAGGTCAGTGCGAGTCCGGACCGGACTTCACACCTTCTCTCTGCAACAAGAAGCTCATCGGAGCTCGCAGCTTCTCCAAGGGATACCGGATGGCTACCGGGGGCAGCTACTTCAAAAAGCCGACGGAAACTGAGTCGCCCCGGGACCGAGACGGACACGGTACTCACACTGCCAGCACGGCAGCTGGATCCCACGTGGCAAACGCCAGCTTACTCGGCTATGCTAGTGGCACGGCGCGTGGGATGGCCACACAAGCGCGGGTCGCCGCTTACAAGGTGTGCTGGACCTCTGGCTGCTTCGGATCCGACATTCTAGCAGGTATCGATCGAGCTATTTCGGACGGTGTGGATGTGCTCTCGCTGTCTCTGGGGGGTGGATCAACTCCTTACTACAGAGACACCATAGCAATCGGAGCATTCACGGCCATGGAGAAGGGCATTTTTGTCTCCTGCTCGGCCGGGAACAGTGGGCCTAGTAGAGCCTCATTGGCGAATGTAGCTCCGTGGATCATGACGGTCGGCGCCGGAACTTTAGACCGAGATTTTCCAGCTTACGTCCAGCTCGGGAACAAACTCCGGTTCACGGGGGTGTCGCTGTACAGCGGTCGTGGAATGGGTAATAACCCGGTGGCTATAGTTTATAACAAAGGAAGTAACAGCTCGAGCAACTTGTGCCTGCCCGGTTCGCTCGACCCGGAGGTGGTACGTGGGAAGGTGGTGGTTTGCGACAGAGGGATTAACCCACGTGTCGAGAAGGGCGGGGTTGTACGCGACGCGGGTGGCGTTGGGATGATACTCGCCAACACCGCGGCCAGCGGTGAGGAATTGGTGGCGGACAGCCACTTGTTGCCGGCAGCTGCCGTGGGAAAGAAGGTGGTTGATAAGATCAGGGAGTATTTGAGGTCTGATCCGAATCCAACGGCGGTGATCAGTTTTGGTGGGACCTTGTTGAACGTGCGGCCTTCTCCCGTTGTGGCGGCCTTTAGTTCTAGGGGGCCCAACCTCGTTACTCCTCAGATCCTCAAGCCGGATGTAATTGGGCCTGGAGTTAATATCCTGGCCGCATGGTCAGAGGCTATTGGGCCTACTGGACTGGAGTCGGATAAAAGGAAGACCCAATTCAATATCATGTCAGGAACGTCCATGTCTTGCCCACACATTAGTGGGCTTGCAGCTTTGCTGAAAGCGGCCCATCCAGACTGGAGCCCAAGCGCGATCAAATCCGCATTAATGACGACCGCATACACAGAGGACAATACAAAGTCTCCTCTACGAGATGCAGCCGCAGCAGGAGTGTCGGCATATTCGAATCCATGGGCTCATGGGTCGGGCCACGTGGATCCACACAAGGCCCTCTCACCTGGCCTTGTCTACGACATCTCGACCGAAGAGTATATAAGATTCCTATGCTCCCTGGACTACACTATTGACCATGTGCAAGGCATCGTCAAACGCAGCAACTTTTCTTGCGCGAACAAGTTCGCCGATCCCGGCCAGCTGAACTACCCGTCGTTCTCGGTGGTGTTTGGAAACAAGAGGGTGGTCAGATATACACGTTTACTGACGAATGTAGGGCCTGCTGGATCGGTTTATATAGCGAGTTTGAAAGCACCGGGGAATGTGAATATGACCGTCAAGCCGACGAAACTTGTGTTTGGAAAGGTTGGGGAGAAAAAGAGCTTTACAGCTACTTTTGTGACGAGTAAAACTGCAATCCCAAGTGGTCGGTCTGATTTTGGATCGATTGTGTGGAAGAACGAGCTATACCAGGTGAAGAGTCCTGTTGCATTTGCATGGACATGGACGCGGCTCTTCTGA 2295 54.86 MARSCFLPILLLLAYVSGAVMAAKKTYIVHMKNHAKPSSYATYHDWYSAHLQSLDSQLFYSYTTAYQGFAAPLDPAQAASLRQSDSVLGVYEDTVYNLHTTRTPEFLGLDPQFGLWQGHNAQGLDQASHDVIIGVLDTGVWPESKSFDDYGMPEIPTRWRGQCESGPDFTPSLCNKKLIGARSFSKGYRMATGGSYFKKPTETESPRDRDGHGTHTASTAAGSHVANASLLGYASGTARGMATQARVAAYKVCWTSGCFGSDILAGIDRAISDGVDVLSLSLGGGSTPYYRDTIAIGAFTAMEKGIFVSCSAGNSGPSRASLANVAPWIMTVGAGTLDRDFPAYVQLGNKLRFTGVSLYSGRGMGNNPVAIVYNKGSNSSSNLCLPGSLDPEVVRGKVVVCDRGINPRVEKGGVVRDAGGVGMILANTAASGEELVADSHLLPAAAVGKKVVDKIREYLRSDPNPTAVISFGGTLLNVRPSPVVAAFSSRGPNLVTPQILKPDVIGPGVNILAAWSEAIGPTGLESDKRKTQFNIMSGTSMSCPHISGLAALLKAAHPDWSPSAIKSALMTTAYTEDNTKSPLRDAAAAGVSAYSNPWAHGSGHVDPHKALSPGLVYDISTEEYIRFLCSLDYTIDHVQGIVKRSNFSCANKFADPGQLNYPSFSVVFGNKRVVRYTRLLTNVGPAGSVYIASLKAPGNVNMTVKPTKLVFGKVGEKKSFTATFVTSKTAIPSGRSDFGSIVWKNELYQVKSPVAFAWTWTRLF 764
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 97797 100639 + Conep04aG0001700.1 Cone4ag0017 434995
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone4ag0017 764 Pfam Peptidase inhibitor I9 26 99 IPR010259 -
Cone4ag0017 764 SUPERFAMILY Subtilisin-like 98 615 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Cone4ag0017 764 Gene3D - 338 476 - -
Cone4ag0017 764 CDD PA_subtilisin_like 344 469 - -
Cone4ag0017 764 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 16 99 IPR037045 -
Cone4ag0017 764 Gene3D Peptidase S8/S53 domain 130 624 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Cone4ag0017 764 Pfam PA domain 380 455 IPR003137 -
Cone4ag0017 764 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 26 754 IPR045051 -
Cone4ag0017 764 CDD Peptidases_S8_3 96 574 IPR034197 -
Cone4ag0017 764 Gene3D - 628 758 - -
Cone4ag0017 764 ProSiteProfiles Serine proteases, subtilase domain profile. 112 611 - -
Cone4ag0017 764 SUPERFAMILY Protease propeptides/inhibitors 25 97 - -
Cone4ag0017 764 MobiDBLite consensus disorder prediction 195 219 - -
Cone4ag0017 764 FunFam Subtilisin-like protease SBT1.5 130 349 - -
Cone4ag0017 764 ProSitePatterns Serine proteases, subtilase family, serine active site. 538 548 IPR023828 -
Cone4ag0017 764 FunFam subtilisin-like protease SBT1.5 338 476 - -
Cone4ag0017 764 FunFam Subtilisin-like protease SBT1.9 16 99 - -
Cone4ag0017 764 Pfam Subtilase family 129 577 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
Cone4ag0017 764 PRINTS Subtilisin serine protease family (S8) signature 537 553 IPR015500 -
Cone4ag0017 764 PRINTS Subtilisin serine protease family (S8) signature 208 221 IPR015500 -
Cone4ag0017 764 PRINTS Subtilisin serine protease family (S8) signature 128 147 IPR015500 -
Cone4ag0017 764 Pfam Fibronectin type-III domain 658 755 IPR041469 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone17ag0877 Cone-Chr17:6938283 Cone4ag0017 Cone-Chr4:97797 6.24E-265 dispersed
Cone18ag1115 Cone-Chr18:8108426 Cone4ag0017 Cone-Chr4:97797 1.44E-122 dispersed
Cone20ag0225 Cone-Chr20:959052 Cone4ag0017 Cone-Chr4:97797 1.98E-266 dispersed
Cone4ag0017 Cone-Chr4:97797 Cone6ag1437 Cone-Chr6:11515594 8.19E-282 dispersed
Cone17ag0065 Cone-Chr17:353909 Cone4ag0017 Cone-Chr4:97797 1.55E-249 wgd
Cone20ag1339 Cone-Chr20:8632633 Cone4ag0017 Cone-Chr4:97797 1.62E-251 wgd
Cone4ag0017 Cone-Chr4:97797 Cone5ag0231 Cone-Chr5:982884 1.54E-143 wgd
Cone4ag0017 Cone-Chr4:97797 Cone7ag0022 Cone-Chr7:100641 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone4ag0017 - - - 0.0