Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone4ag0057 | ATGACTTGCTACGTCGCTGTTTCGAGCTCTCCAAGCTTTTCTCCATCATCGTCTCTTTTCTGCAGCAAATCCATAATCTCGCCTTCCCACGAGGCGGTAACCCTAACCTTAAGCCACTTAAAGTCCTCGCAATCTTCGTCTTCGTCCTACTCTTCAGCTCCATCTTCGCCTTCTTCGCCTTTTCGGCCCCGCCTTCCGAAACCACCACATGTAAGTTCTCCTTTTGTTTCGGCAGCTTCCAATTCGACTCTGGCTCCATCTCCGGTCCCGTTGTCTTCCTCAGCTCATACGGAGCTAAAGAGGAAGAGGCCGGCGAGGTTAGACATTCCTGTGGCATCGTTGAGTTTGGGGAATTTGTCGATTCCCTCACCGGCGTCGATGAGGGAGATCGTAGAGGTTGACAGAGAGGGCCATTCTATTTACTGCAAAAGAGGCAGGAGAGAGTCTATGGAGGATCGCTACTCCGCCGCCGTTGATCTTCAAGGAGATCCCAAACAGGCTTTCTTCGGCGTCTTTGACGGGCATGGAGGTGCAAAAGCTGCTCAATTTGCAGCTGAAAACTTGGAAAAGAACATTTTTGACGAAATAGAAAGGAGGGACGAGGCTGAAATCGAGCAGGCTGTTAAGACTGGTTACCTCAACACTGATTCCGATTTCTTAAAAGAGGATATGCGTGGTGGGTCCTGTTGTGTAACTGCTTTGATCAGAAAAGGCAACCTTGTTGTATCCAATGCCGGTGATTGCCGTGCCGTTATAAGCAAAGGGGGAGTCGCAGAGGCTCTCACATCAGATCACTGTCCTTCCAGACAAGATGAAAGGGATAGAATTGAGACCTCGGGTGGATATGTTGATTTCTGCCATGGAGTACTGAGAATTCAAGGATCTTTGGCAGTCTCTAGAGGTATCGGAGACAGGCACCTTAAAAAGTGGGTAATTGCAGAACCAGAGACGAAAATCTTTTCAATAGAATCTCAACATGAGTTCTTACTCTTAGCTTCAGACGGCTTATGGGATACGGTGACCAATCAAGAAGCTGTAGACATTGTCAGACCGTTATGTATCAAAAGTGACAAACCGGAACCATTGTTTGCATGTAAAAAGCTTGTGGAGCTTTCTACTTCAAGAGGGTCTGCAGATGATATCAGTGTCATACTAATCCAGTTGGGAAACTATATCAGTTGA | 1182 | 47.29 | MTCYVAVSSSPSFSPSSSLFCSKSIISPSHEAVTLTLSHLKSSQSSSSSYSSAPSSPSSPFRPRLPKPPHVSSPFVSAASNSTLAPSPVPLSSSAHTELKRKRPARLDIPVASLSLGNLSIPSPASMREIVEVDREGHSIYCKRGRRESMEDRYSAAVDLQGDPKQAFFGVFDGHGGAKAAQFAAENLEKNIFDEIERRDEAEIEQAVKTGYLNTDSDFLKEDMRGGSCCVTALIRKGNLVVSNAGDCRAVISKGGVAEALTSDHCPSRQDERDRIETSGGYVDFCHGVLRIQGSLAVSRGIGDRHLKKWVIAEPETKIFSIESQHEFLLLASDGLWDTVTNQEAVDIVRPLCIKSDKPEPLFACKKLVELSTSRGSADDISVILIQLGNYIS | 393 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 293560 | 295589 | + | Conep04aG0005700.1 | Cone4ag0057 | 435035 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone4ag0057 | 393 | SUPERFAMILY | PP2C-like | 135 | 390 | IPR036457 | - | |
Cone4ag0057 | 393 | Gene3D | - | 138 | 392 | IPR036457 | - | |
Cone4ag0057 | 393 | CDD | PP2Cc | 137 | 388 | IPR001932 | - | |
Cone4ag0057 | 393 | ProSiteProfiles | PPM-type phosphatase domain profile. | 137 | 388 | IPR001932 | - | |
Cone4ag0057 | 393 | Coils | Coil | 185 | 205 | - | - | |
Cone4ag0057 | 393 | PANTHER | PROTEIN PHOSPHATASE | 124 | 386 | IPR015655 | GO:0004722(InterPro)|GO:0004722(PANTHER)|GO:0006470(InterPro)|GO:0035970(PANTHER) | |
Cone4ag0057 | 393 | ProSitePatterns | PPM-type phosphatase domain signature. | 168 | 176 | IPR000222 | GO:0043169(InterPro) | |
Cone4ag0057 | 393 | Pfam | Protein phosphatase 2C | 140 | 381 | IPR001932 | - | |
Cone4ag0057 | 393 | FunFam | probable protein phosphatase 2C 25 | 130 | 391 | - | - | |
Cone4ag0057 | 393 | SMART | PP2C_4 | 124 | 386 | IPR001932 | - | |
Cone4ag0057 | 393 | MobiDBLite | consensus disorder prediction | 44 | 58 | - | - | |
Cone4ag0057 | 393 | MobiDBLite | consensus disorder prediction | 44 | 79 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone4ag0057 | Cone-Chr4:293560 | Cone7ag1645 | Cone-Chr7:11098796 | 2.05E-57 | dispersed | |
Cone12ag0679 | Cone-Chr12:6226908 | Cone4ag0057 | Cone-Chr4:293560 | 1.93E-75 | transposed | |
Cone14ag0667 | Cone-Chr14:3439058 | Cone4ag0057 | Cone-Chr4:293560 | 8.51E-13 | wgd | |
Cone4ag0057 | Cone-Chr4:293560 | Cone5ag0192 | Cone-Chr5:795244 | 6.00E-123 | wgd | |
Cone4ag0057 | Cone-Chr4:293560 | Cone7ag0053 | Cone-Chr7:230820 | 1.88E-232 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone4ag0057 | K17506 | - | csv:101207841 | 481.485 |