Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone4ag0068 ATGGGTGTGGCTTCTGAGATTCAGTTCCATGTTCTTGCTGTTGACGACAGCCTTGTTGACAGGAAACTGATTGAGAGGCTCCTCAAGACATCTTCTTATCATGTTACTACAGTTGATTCTGGTAGTAAGGCCTTAGATTTTCTGGGTTTCCATGAAGATCATGTTTCTTCTCCTAACGCTCAAGAGGTTGAGGTAAACTTAATTATTACCGATTACTGTATGCCGGAGATGTCGGGTTTTGATCTCCTCCGGAAGATCAAAGAATCTAAGTCTCTTAGAGATATTCCAGTTGTTGTCATGTCCTCAGATAACGTCCCATCCAGGATAAGCAGATGCTTGGAAGAGGGGGCAGAAGATTTCCTCTTGAAGCCAGTTCAGATAGGCGACATCGGCAAGCTTAGATCCCAGAAGAAGCCTGGTTCGGATTGA 429 44.29 MGVASEIQFHVLAVDDSLVDRKLIERLLKTSSYHVTTVDSGSKALDFLGFHEDHVSSPNAQEVEVNLIITDYCMPEMSGFDLLRKIKESKSLRDIPVVVMSSDNVPSRISRCLEEGAEDFLLKPVQIGDIGKLRSQKKPGSD 142
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 349029 349998 + Conep04aG0006900.1 Cone4ag0068 435046
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone4ag0068 142 SUPERFAMILY CheY-like 9 130 IPR011006 -
Cone4ag0068 142 Pfam Response regulator receiver domain 11 130 IPR001789 GO:0000160(InterPro)
Cone4ag0068 142 CDD REC_typeA_ARR 11 133 - -
Cone4ag0068 142 Gene3D - 10 137 - -
Cone4ag0068 142 SMART REC_2 9 134 IPR001789 GO:0000160(InterPro)
Cone4ag0068 142 ProSiteProfiles Response regulatory domain profile. 10 138 IPR001789 GO:0000160(InterPro)
Cone4ag0068 142 PANTHER TWO-COMPONENT RESPONSE REGULATOR 7 133 IPR045279 GO:0009736(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone4ag0068 Cone-Chr4:349029 Cone5ag0136 Cone-Chr5:592751 4.40E-52 dispersed
Cone4ag0068 Cone-Chr4:349029 Cone7ag0062 Cone-Chr7:273575 3.31E-86 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
45886 PF00903 Glyoxalase 9.30E-10 CL0104 Cone TR
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone4ag0068 K14492 - vvi:100243627 204.527