Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone4ag0075 | ATGGCTTCCTCTTCTGGGAGCTTAGACGCCTCTGCAAATTCACGTCAAAACCTCACCTTCTCCACACACCCTTTCATGAATACATCATACTCCGAACTCTTAGCCTCCGGCAGCGGCGGAGACGACTTCACCCGACGCCGTGGTCTGTCAGAACGAATAGCAGAACGAACAGGCTCAGGTGTACCGAAATTCAAATCGATCCCACCTCCTTCCCTGCCGCTATCTCCATCACCTGTCTCTCCTTCCTCATACTTTGCTATTCCGGCTGGGCTCAGCCCAGCCGAGCTCCTCGACTCCCCTGTTCTTCTCAGCTCCTCTTACATTCTTCCATCTCCAACTACTGGATCGTTTCCAGCTCAAGCTTTCAATTGGAAAAGCGATTCTACATATAATTACAATAACAACAACCAGCAGCAGAATATTGTCAAACTGAAAGAAGCTGATCCTAGGACCTTCTTCGATTTCTCCTTCCAAAACCAGCAAAAGGCTTCTTCTGCCTCTTTAACTGGGTGGAGTTTTCAAGAGCCAATAAGCAAGCAAGAAACCAAGGGAAAGCCGGAATTCGCGCTGGCTCAGACCCAGAGCTTCTCTCCTGAGATTTCCACCTTACAGACTCAGAGCCAGAGCAACAACGATGGCGCTACTGCTGCTACTCATGACTACACCAATCACCATAACAACCAGAATCATTCAGTATACAATAAAAGGTCGGATGATGGGTATAACTGGAGAAAATACGGACAAAAGCAAGTGAAAGGGAGTGAAAATCCAAGGAGTTATTACAAGTGCACTTTCCCGAATTGTCCGACTAAGAAGAAAGTGGAAAGGTCATTAGATGGTCAGATCACTGAAATCGTTTACAAGGGCAGCCATAACCATCCTAAGCCGCAGAACACGAGGCCATCCTCGTCGTCTGCTTCTGCTGCTTCTTCTTCTCTTGCATTGATCCAACAGGCTTCTAATCATTCCATCAGTGAATTTCCCGATCACTCATTTAGTACCATTACGAACGGGCAGATGGATTCCGCCGCTGCTACGCCTGAAAATTCTTCTATCTCGATCGGAGACGATGATTTCGACCGGAATTCTCAGAGAAGCAAATCAGCAGGAGGTGATGACTTTGATGAGGATGAAGAACCCGTCGCGAAAAGATGGAAAATGGAGGGGGATGTTAGTAACAGCAATGAAGGCATGTCAGCAGCAGGAAGCAGAACAGTAAGAGAGCCGAGAGTTGTTGTTCAAACAACTAGTGATATTGATATTCTTGATGATGGATATAGGTGGAGAAAATATGGGCAGAAAGTTGTCAAGGGAAATCCAAATCCAAGGAGCTACTATAAGTGTACAAGTCCAGGATGTCCAGTGAGAAAGCATGTGGAGAGAGCATCTCATGATCTAAGGGCAGTTATTACAACCTACGAGGGAAAGCACAACCATGATGTTCCCGCCGCCCGCGGGAGTGGAAGCCATTCTCTTAACCGCCCTTTACCCACCGCCAATACCAATCCCGGCCCACCGGCGATTTGCCCCATGGCCCATCACCAGATGACGAACAAGACCAATCTTCTTCATCCATCCTATACTATGGAAATGTTACAGGGTCCTAGTGGAGGTAGTTTTGGATTCTCGACTGAATATGGAAACTCTGTTAACGGCTCTACTTCTTACATGAACCAAGCACAACAACAACTCACGGATAATACTAATAACAATAATAATGTCTTCTCCTCAAGAGCTAAGGAAGAACCAAGAGATGACTTGTTCTTGGAATCTTTGCTTTGCTAA | 1785 | 46.44 | MASSSGSLDASANSRQNLTFSTHPFMNTSYSELLASGSGGDDFTRRRGLSERIAERTGSGVPKFKSIPPPSLPLSPSPVSPSSYFAIPAGLSPAELLDSPVLLSSSYILPSPTTGSFPAQAFNWKSDSTYNYNNNNQQQNIVKLKEADPRTFFDFSFQNQQKASSASLTGWSFQEPISKQETKGKPEFALAQTQSFSPEISTLQTQSQSNNDGATAATHDYTNHHNNQNHSVYNKRSDDGYNWRKYGQKQVKGSENPRSYYKCTFPNCPTKKKVERSLDGQITEIVYKGSHNHPKPQNTRPSSSSASAASSSLALIQQASNHSISEFPDHSFSTITNGQMDSAAATPENSSISIGDDDFDRNSQRSKSAGGDDFDEDEEPVAKRWKMEGDVSNSNEGMSAAGSRTVREPRVVVQTTSDIDILDDGYRWRKYGQKVVKGNPNPRSYYKCTSPGCPVRKHVERASHDLRAVITTYEGKHNHDVPAARGSGSHSLNRPLPTANTNPGPPAICPMAHHQMTNKTNLLHPSYTMEMLQGPSGGSFGFSTEYGNSVNGSTSYMNQAQQQLTDNTNNNNNVFSSRAKEEPRDDLFLESLLC | 594 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 366501 | 368908 | - | Conep04aG0007700.1 | Cone4ag0075 | 435053 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone4ag0075 | 594 | Gene3D | WRKY domain | 409 | 475 | IPR036576 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cone4ag0075 | 594 | ProSiteProfiles | WRKY domain profile. | 417 | 482 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cone4ag0075 | 594 | MobiDBLite | consensus disorder prediction | 199 | 241 | - | - | |
Cone4ag0075 | 594 | MobiDBLite | consensus disorder prediction | 199 | 236 | - | - | |
Cone4ag0075 | 594 | MobiDBLite | consensus disorder prediction | 478 | 506 | - | - | |
Cone4ag0075 | 594 | SUPERFAMILY | WRKY DNA-binding domain | 414 | 482 | IPR036576 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cone4ag0075 | 594 | MobiDBLite | consensus disorder prediction | 287 | 406 | - | - | |
Cone4ag0075 | 594 | Gene3D | WRKY domain | 221 | 297 | IPR036576 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cone4ag0075 | 594 | PANTHER | WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED | 158 | 514 | IPR044810 | GO:0003700(InterPro) | |
Cone4ag0075 | 594 | FunFam | WRKY transcription factor | 226 | 297 | - | - | |
Cone4ag0075 | 594 | SMART | WRKY_cls | 422 | 481 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cone4ag0075 | 594 | SMART | WRKY_cls | 237 | 295 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cone4ag0075 | 594 | FunFam | WRKY transcription factor 33 | 409 | 475 | - | - | |
Cone4ag0075 | 594 | ProSiteProfiles | WRKY domain profile. | 238 | 296 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cone4ag0075 | 594 | MobiDBLite | consensus disorder prediction | 292 | 353 | - | - | |
Cone4ag0075 | 594 | MobiDBLite | consensus disorder prediction | 354 | 390 | - | - | |
Cone4ag0075 | 594 | MobiDBLite | consensus disorder prediction | 35 | 73 | - | - | |
Cone4ag0075 | 594 | Pfam | WRKY DNA -binding domain | 238 | 294 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cone4ag0075 | 594 | Pfam | WRKY DNA -binding domain | 423 | 480 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cone4ag0075 | 594 | SUPERFAMILY | WRKY DNA-binding domain | 235 | 296 | IPR036576 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone10ag0424 | Cone-Chr10:1965020 | Cone4ag0075 | Cone-Chr4:366501 | 1.76E-129 | dispersed | |
Cone3ag0455 | Cone-Chr3:2192890 | Cone4ag0075 | Cone-Chr4:366501 | 4.61E-135 | dispersed | |
Cone4ag0075 | Cone-Chr4:366501 | Cone9ag0026 | Cone-Chr9:128238 | 4.38E-80 | dispersed | |
Cone4ag0075 | Cone-Chr4:366501 | Cone7ag0070 | Cone-Chr7:297307 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
45888 | PF00481 | PP2C | 7.50E-60 | CL0238 | Cone | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone4ag0075 | K13424 | - | vvi:100243352 | 658.292 |