Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone4ag0090 | ATGGCGTCCTTGGCAGCATCAACAGCCGCTGCCTCCCTTGGCGTGTCGGAAATGCTCGGAAATCCCCTCAAATTTAGCGGGGCTGCCGCAGCTCCAGGCGCTTCCAGTCCGGCCACCTTCAAGACCGTTGCCCTCTTCTCCAAGAAGAAGGCAGCCCCACCTAAGTCAAAGCCTGCACCTGCAACTCCGGCAAGTGATGAGCTTGCCAAGTGGTATGGTCCAGATAGGAGGATTTACTTGCCCTCAGGCCTCTTGGACCGGTCCGAGATCCCCGAGTACTTGACCGGAGAGGTTCCAGGAGATTATGGTTATGATCCTTTTGGTCTGAGCAAGAAGCCAGAAAACTTCAGCAAATACCAAGCATATGAGCTGATCCACGCACGGTGGGCAATGCTCGGTGCTGCTGGCTTTATCATTCCTGAGGCATTCAACAAATTCGGTGCCAACTGTGGTCCTGAAGCTGTTTGGTTCAAGACAGGAGCTCTCCTTTTGGATGGGAACACATTGAACTACTTCGGCAAGAACATTCCCATCAATCTTGTCCTTGCTGTAGTTGCCGAGGTTGTTCTTCTTGGCGGTGCCGAATATTACAGAATTACTAACGGATTGGACTTCGAAGATAAGCTCCACCCAGGCGGTCCTTTCGATCCGTTGGGTCTAGCAAATGATCCCGACCAGGCTGCAATTTTGAAGGTGAAGGAGATAAAGAATGGTAGACTAGCCATGTTTTCAATGCTTGGTTTCTTCATTCAAGCTTACGTCACAGGAGAAGGTCCGGTCGAAAACCTTGCAAAGCATCTTAGTGACCCTTTCGGAAACAACTTGCTCACGGTCATTTCAGGAAATGCTGAAAGAGCTCCTACTCTGTGA | 870 | 50.69 | MASLAASTAAASLGVSEMLGNPLKFSGAAAAPGASSPATFKTVALFSKKKAAPPKSKPAPATPASDELAKWYGPDRRIYLPSGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPENFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINLVLAVVAEVVLLGGAEYYRITNGLDFEDKLHPGGPFDPLGLANDPDQAAILKVKEIKNGRLAMFSMLGFFIQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERAPTL | 289 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 436412 | 438555 | - | Conep04aG0009200.1 | Cone4ag0090 | 435068 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone4ag0090 | 289 | FunFam | Chlorophyll a-b binding protein, chloroplastic | 78 | 289 | - | - | |
Cone4ag0090 | 289 | Gene3D | Chlorophyll a/b binding protein domain | 78 | 289 | - | - | |
Cone4ag0090 | 289 | PANTHER | CHLOROPHYLL A/B BINDING PROTEIN | 19 | 277 | IPR001344 | GO:0009416(PANTHER)|GO:0009535(PANTHER)|GO:0009765(InterPro)|GO:0009768(PANTHER)|GO:0009941(PANTHER)|GO:0010287(PANTHER)|GO:0016020(InterPro) | |
Cone4ag0090 | 289 | SUPERFAMILY | Chlorophyll a-b binding protein | 71 | 279 | - | - | |
Cone4ag0090 | 289 | Pfam | Chlorophyll A-B binding protein | 91 | 252 | IPR022796 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone4ag0090 | Cone-Chr4:436412 | Cone6ag0906 | Cone-Chr6:4652083 | 1.35E-71 | dispersed | |
Cone4ag0090 | Cone-Chr4:436412 | Cone7ag0081 | Cone-Chr7:361283 | 1.60E-202 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone4ag0090 | K08916 | - | vvi:100246457 | 504.597 |