Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cone4ag0100 ATGGCAACGTCTCTGATATCGAATTCGGTTTCGAACTCTAATCGATCATGGGACCCTTCCGGAAGGAGAAAGAATAAGAGAACACAGGGAGTCAAAGATGTTGGTGGTGGTGTTGGTGATGATCGGACTCACCTACGATGGAAATCCGAATCGCAAGAGCAAATCTACTCATCGAAACTGGCTCAAGCCCTAAAAAAAGTACGGATCATCCCGTCCCCTTCCGCTTCCAATCACGAAGTTAGATGTCGCAGCAGAGTCGTGCGGGAGACCGCGGACAGGCTCCTGGCGGTGGCCGCTAAGGGACGGACAAGATGGAGCCGCGCGATCTTGACCAATCGTCTCAAACTCAAGTTTAGAAAGAAGAACAGAAGGCAGGAGAGAGTGTCCGCCGTGGCCAATACCCGATCGAAGAATAAACCGAGCGTGAGCGTATTGCGTTTGAAAGGAAAGTGTCTTCCCGCTGTACAGAGGAAAGTACGAGTTCTAAGTCGCTTGGTACCCGGTTGCTGGGCGAAACCGTTGCCGGTGGTCCTTGAAGAAGCTACTGATTATATCGCCGCTCTTGAGATGCAGGTTCGAGCCATGAATGCTCTCGCTAACCTCCTCTCCACCGCCGCATCCATTTCCGCTCCGTCGACCTGA 642 52.34 MATSLISNSVSNSNRSWDPSGRRKNKRTQGVKDVGGGVGDDRTHLRWKSESQEQIYSSKLAQALKKVRIIPSPSASNHEVRCRSRVVRETADRLLAVAAKGRTRWSRAILTNRLKLKFRKKNRRQERVSAVANTRSKNKPSVSVLRLKGKCLPAVQRKVRVLSRLVPGCWAKPLPVVLEEATDYIAALEMQVRAMNALANLLSTAASISAPST 213
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
4 482564 483222 - Conep04aG0010200.1 Cone4ag0100 435078
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cone4ag0100 213 MobiDBLite consensus disorder prediction 1 18 - -
Cone4ag0100 213 CDD bHLH_AtIBH1_like 144 199 IPR044549 GO:0006355(InterPro)
Cone4ag0100 213 Coils Coil 178 198 - -
Cone4ag0100 213 MobiDBLite consensus disorder prediction 1 43 - -
Cone4ag0100 213 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 47 202 IPR044660 GO:0006355(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone4ag0100 Cone-Chr4:482564 Cone5ag0081 Cone-Chr5:396828 7.92E-38 dispersed
Cone10ag0823 Cone-Chr10:4186969 Cone4ag0100 Cone-Chr4:482564 2.87E-36 wgd
Cone14ag0710 Cone-Chr14:3874108 Cone4ag0100 Cone-Chr4:482564 1.01E-64 wgd
Cone15ag0723 Cone-Chr15:4086223 Cone4ag0100 Cone-Chr4:482564 2.09E-65 wgd
Cone3ag0849 Cone-Chr3:4369602 Cone4ag0100 Cone-Chr4:482564 5.13E-37 wgd
Cone4ag0100 Cone-Chr4:482564 Cone7ag0095 Cone-Chr7:417925 7.81E-112 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone4ag0100 - - - 0.0