Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cone4ag0100 | ATGGCAACGTCTCTGATATCGAATTCGGTTTCGAACTCTAATCGATCATGGGACCCTTCCGGAAGGAGAAAGAATAAGAGAACACAGGGAGTCAAAGATGTTGGTGGTGGTGTTGGTGATGATCGGACTCACCTACGATGGAAATCCGAATCGCAAGAGCAAATCTACTCATCGAAACTGGCTCAAGCCCTAAAAAAAGTACGGATCATCCCGTCCCCTTCCGCTTCCAATCACGAAGTTAGATGTCGCAGCAGAGTCGTGCGGGAGACCGCGGACAGGCTCCTGGCGGTGGCCGCTAAGGGACGGACAAGATGGAGCCGCGCGATCTTGACCAATCGTCTCAAACTCAAGTTTAGAAAGAAGAACAGAAGGCAGGAGAGAGTGTCCGCCGTGGCCAATACCCGATCGAAGAATAAACCGAGCGTGAGCGTATTGCGTTTGAAAGGAAAGTGTCTTCCCGCTGTACAGAGGAAAGTACGAGTTCTAAGTCGCTTGGTACCCGGTTGCTGGGCGAAACCGTTGCCGGTGGTCCTTGAAGAAGCTACTGATTATATCGCCGCTCTTGAGATGCAGGTTCGAGCCATGAATGCTCTCGCTAACCTCCTCTCCACCGCCGCATCCATTTCCGCTCCGTCGACCTGA | 642 | 52.34 | MATSLISNSVSNSNRSWDPSGRRKNKRTQGVKDVGGGVGDDRTHLRWKSESQEQIYSSKLAQALKKVRIIPSPSASNHEVRCRSRVVRETADRLLAVAAKGRTRWSRAILTNRLKLKFRKKNRRQERVSAVANTRSKNKPSVSVLRLKGKCLPAVQRKVRVLSRLVPGCWAKPLPVVLEEATDYIAALEMQVRAMNALANLLSTAASISAPST | 213 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 4 | 482564 | 483222 | - | Conep04aG0010200.1 | Cone4ag0100 | 435078 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cone4ag0100 | 213 | MobiDBLite | consensus disorder prediction | 1 | 18 | - | - | |
| Cone4ag0100 | 213 | CDD | bHLH_AtIBH1_like | 144 | 199 | IPR044549 | GO:0006355(InterPro) | |
| Cone4ag0100 | 213 | Coils | Coil | 178 | 198 | - | - | |
| Cone4ag0100 | 213 | MobiDBLite | consensus disorder prediction | 1 | 43 | - | - | |
| Cone4ag0100 | 213 | PANTHER | TRANSCRIPTION FACTOR IBH1-LIKE 1 | 47 | 202 | IPR044660 | GO:0006355(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cone4ag0100 | Cone-Chr4:482564 | Cone5ag0081 | Cone-Chr5:396828 | 7.92E-38 | dispersed | |
| Cone10ag0823 | Cone-Chr10:4186969 | Cone4ag0100 | Cone-Chr4:482564 | 2.87E-36 | wgd | |
| Cone14ag0710 | Cone-Chr14:3874108 | Cone4ag0100 | Cone-Chr4:482564 | 1.01E-64 | wgd | |
| Cone15ag0723 | Cone-Chr15:4086223 | Cone4ag0100 | Cone-Chr4:482564 | 2.09E-65 | wgd | |
| Cone3ag0849 | Cone-Chr3:4369602 | Cone4ag0100 | Cone-Chr4:482564 | 5.13E-37 | wgd | |
| Cone4ag0100 | Cone-Chr4:482564 | Cone7ag0095 | Cone-Chr7:417925 | 7.81E-112 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cone4ag0100 | - | - | - | 0.0 |