Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone4ag0122 ATGGCTACGATGAGCTTCATCTACGACATCCTCCTATTGTTCCTTCTTCTCACAGCAATACCCGCTTCGGTCTCTCAGCAAACTGAAGCTCCACCTCCGGCTGCCGATTCCTGCAACGGCATCTTCCTATCTTACTCATACACCGACGGGAAGGTGATCCCACCTAATCTTAAGTCCGATCCAACTAAACAGCCCTACCGATTCGAGTCTGTTCTTACTGTTCTCAACAACGGGCCTGACGAGCTCAAGTCGTGGAGAGTTTTCGTTGGGTTTAAGCACGATGAGTACTTGGTCTCTGCTTCGAATGCTGTGCTTTCTGATGGGACCTCCATCCCTGGCGGCGTTGGCAATGGAACTGTTTTTGCCGGATACCCCGCGACGGACCTCAAGACGGCGATTGAGACGGCGGGTGACTTGACCCAGATGCAGGTTCAGGTCAATTTGATTGGGACCCAGTTCGGTGTGGCCCCTCCTGCCGTTCCGATGCCGTCGAATATATCACTGGCTAATGATGGGTTTGTCTGTCCTAAACCAACTATGCAAGGGACACGGGAAATGCAAGTGTGTTGCACTCAAGATCTGAATGTCAAAACAAACATAACTGTCACCGAGGAGTTCTTACCGCGTGGGACTGGTGATCTTACCATCATGTATGATGTGACCAAAACATACGATTCTAGTTACTGGGCCCAGGTCACTATCTCTAACCACAACGCCCTTGGCCGTCTTGATAATTGGAGATTAGGCTGGGAATGGATGAGGGATGAATTCATCTACTCCATGAAAGGAGCATATCCATCTATTGTTGATTCTTCAGAATGCATATTTGGCCAACAAGGAACATACTATCAGGCCCTAGACTTCTCAACCGTATTGAATTGTGAAAAAACGCCTACCATCATTGACTTACCTCTTACAAAGGCCAATGACACAATTCTCGGCCTGATCCCACACTGTTGCAGAAACGGCACTATCTTGCCTCCTCATATGGATCCAAGCAAGTCCATCTCTGCTTTCCAGATGCAAGTTTTCAAAATGCCTCCTGATCTAAACCGATCTCAGCTCACACCGCCCCAAAACTGGAAAATCAGTGGAACTTTAAACCCGACCTACAAATGTGGGGCCCCGGTTAGGGTGAGTCCTAGCCAATTCCCAGACCCAAGTGGGCTCCCCTCTAATTCAACTGCGGTCGCCAGCTGGCAGATCGTTTGCAATATATCCGAGCCCAAAGGATCAACCCCTAAATGCTGCGTTTCGTTTTCTGCTTACTACAATGATTCTGCAATCCCATGCAAAACTTGTGCATGTGGATGCCCATCTAACACGGCCCGTGCTTGTAGCACTACGGCCCAAGCCATGCTTCTTCCACCCGAGTCACTTCTTGTACCATTTGAAAACCGGTCTGCTAAGGCTCTAGCCTGGGCCAATATTAAACATCTATCAACTCCAAACCCGTTGCCATGTGGCGATAACTGTGGGGTCAGTATCAACTGGCATGTATACTCGGATTATACTAAGGGATGGAGTGCAAGGGTTACACTGTTCAACTGGGGTGATACTTCTTTTGCGGATTGGTTTGCTGCTGTTGAGATGAACAAAACAGGGCCTGGGTTTCAAGCTATGTACTCGTTTAATGGAACTTCATTGGAAACGGATGGTGTGAACAATACTATCTTCATGCAGGGTCTTGAGGGATTGAACTATCTTGTTGCGGAAGTAGATGGAGCAAACCCAAGCAAGGATCCTAGGGTTCCTGGGAAACAGCAGTCTGTTATTTCATTTACAAAGAAGAATATAGCGGGTATCAATGTGGCTGCTGGAGATGGGTTTCCGACTAAAGTGATCTTTAACGGAGAGGAGTGTTCGCTTCCTACTGTACTTCCTAGTGGAGCCACTGGGAGGGGATTGAGGTCTGCTACATTTGTTTCATTTTACTTGACGGTTCTGATACTTGTGTTGATTTGA 1965 47.84 MATMSFIYDILLLFLLLTAIPASVSQQTEAPPPAADSCNGIFLSYSYTDGKVIPPNLKSDPTKQPYRFESVLTVLNNGPDELKSWRVFVGFKHDEYLVSASNAVLSDGTSIPGGVGNGTVFAGYPATDLKTAIETAGDLTQMQVQVNLIGTQFGVAPPAVPMPSNISLANDGFVCPKPTMQGTREMQVCCTQDLNVKTNITVTEEFLPRGTGDLTIMYDVTKTYDSSYWAQVTISNHNALGRLDNWRLGWEWMRDEFIYSMKGAYPSIVDSSECIFGQQGTYYQALDFSTVLNCEKTPTIIDLPLTKANDTILGLIPHCCRNGTILPPHMDPSKSISAFQMQVFKMPPDLNRSQLTPPQNWKISGTLNPTYKCGAPVRVSPSQFPDPSGLPSNSTAVASWQIVCNISEPKGSTPKCCVSFSAYYNDSAIPCKTCACGCPSNTARACSTTAQAMLLPPESLLVPFENRSAKALAWANIKHLSTPNPLPCGDNCGVSINWHVYSDYTKGWSARVTLFNWGDTSFADWFAAVEMNKTGPGFQAMYSFNGTSLETDGVNNTIFMQGLEGLNYLVAEVDGANPSKDPRVPGKQQSVISFTKKNIAGINVAAGDGFPTKVIFNGEECSLPTVLPSGATGRGLRSATFVSFYLTVLILVLI 654
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 572363 575218 + Conep04aG0012600.1 Cone4ag0122 435100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone4ag0122 654 PANTHER COBRA-LIKE PROTEIN 7 10 652 - -
Cone4ag0122 654 Pfam COBRA-like protein 228 407 IPR006918 GO:0010215(InterPro)|GO:0016020(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone16ag0165 Cone-Chr16:1013318 Cone4ag0122 Cone-Chr4:572363 3.91E-252 dispersed
Cone4ag0122 Cone-Chr4:572363 Cone6ag0084 Cone-Chr6:406711 1.58E-256 dispersed
Cone7ag0119 Cone-Chr7:503868 Cone4ag0122 Cone-Chr4:572363 7.07E-126 transposed
Cone15ag0747 Cone-Chr15:4342724 Cone4ag0122 Cone-Chr4:572363 0 wgd
Cone4ag0122 Cone-Chr4:572363 Cone7ag0118 Cone-Chr7:502059 4.42E-178 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone4ag0122 - - - 0.0