Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone4ag0153 ATGTATGAGGGAATTTTAATCAAACGTGAAGGAGAACTTAAAGTAAGCTTTGGGTATCAATGCAATGGTGGAAGAGGTAGTGCTTATGATGTTTCTGATGGATTTGAAATCCATCCTGAACTTCAAAGGGCCAGCAGTTTCTCTTGCTTGTCTGGTGCTGCCTTAAGTGCTAACGCTACCTTAGCTAACACAAATATTTGTAAGGGTCTTATAGGGACAGAAATACTTCCTAGTTGGGACTCTCCCAATTCATTTCGTAAGGTTCCCTCTTCTCCAAATCTCTCTAAGTTGGATATTCTCTCTTCCTCCCTCCAGAGTAGCTTATCAAATTTAAGTTGCAGTCCCTCCACTCCAACTGAATGTGATTCCTATTTGTTGAAACCCATGAGTGCACCTTCAGGAAGCAAAGCCTTCCTTAATTCAATGGAATTGCAAGTGGCAGGTGGGGCTGCTGGTGAAGACAGAGTACAGGCTGTCTGTTCTGAGGAAAATGGGTGGCTCTTTTGTGCAATTTATGATGGCTTTAATGGAAGAGACGCTGCTGATTTCCTGGCTGGAACATTGTATGAAACTATCATAAATTACTTTAAACTACTGGACTGGGAAAATAACCAGGAAATTGATGGGTCATTGCAGTATATCTTTGATGATCACAATATTAGCTGCAAAAAAAAATATCTTTCAAAGTTTCATTGTAAAGTGGATTCAGATGTTGATGATGCATATACCAAACCAGAATTGTTTAACGATCCATTTAGGCAAGCGGTTCTTGATAGCCTAGAACGTGCCCTTAGTCAGGCGGAGAATGATTTTCTCCACATGGTTGAGCAAGAAATGGAGGACCGGCCTGATTTAGTGTCTGTTGGATCTTGTGTTTTACTTGTTCTTCTTCATGGAAAGGATTTGTACACACTAAATCTAGGTGATAGTAGGGCAGTAGTGGCAACCTATATCGAAGGTGAGGAGGACATGTATGGGAATGAGAGATTGAAAGCAATCCAGCTTACTGATAGTCACACTGTTGACAATGAAGCGGAAAGAACGCAGCTGGTGCATGATCATCCCGACGATCCCATGACTGTTGTGGGTGGTAAAGTCAAAGGAAAACTTAAGGTCACTCGTGCTTTTGGAGTTGGCTACTTAAAGAAGAAAAAGCTTAATGATGCATTGATGGGAATTCTTCAAGTTCAGAACCTGAAAAGCCCTCCCTATGTTTCTACTCAACCATCAATGAATGTGCATAGAATAGGAAAGTCCGACCGCTTCGTTATAGTTGCAAGCGATGGCCTATTTGACTTCTTCAGCAATGAGGAGGCAGTAAAGCTCGTTCATTACTATATCTTGACCAACCCTACTGGTGATCCAGCCAAATTTCTGTTGGAGGAGCTTGTACTCAGAGCCGCTGATTGTGCAGGTTTTAGCATGGAAGAATTGATGAACGTTCCAGCTGGCAGGAGAAGAAAATATCACGATGATGTAACTGTGATTGTTATCACTCTCGGAACAAAACAGCGTACTACCAAGGCATCAACCTTTGTGTAA 1542 41.76 MYEGILIKREGELKVSFGYQCNGGRGSAYDVSDGFEIHPELQRASSFSCLSGAALSANATLANTNICKGLIGTEILPSWDSPNSFRKVPSSPNLSKLDILSSSLQSSLSNLSCSPSTPTECDSYLLKPMSAPSGSKAFLNSMELQVAGGAAGEDRVQAVCSEENGWLFCAIYDGFNGRDAADFLAGTLYETIINYFKLLDWENNQEIDGSLQYIFDDHNISCKKKYLSKFHCKVDSDVDDAYTKPELFNDPFRQAVLDSLERALSQAENDFLHMVEQEMEDRPDLVSVGSCVLLVLLHGKDLYTLNLGDSRAVVATYIEGEEDMYGNERLKAIQLTDSHTVDNEAERTQLVHDHPDDPMTVVGGKVKGKLKVTRAFGVGYLKKKKLNDALMGILQVQNLKSPPYVSTQPSMNVHRIGKSDRFVIVASDGLFDFFSNEEAVKLVHYYILTNPTGDPAKFLLEELVLRAADCAGFSMEELMNVPAGRRRKYHDDVTVIVITLGTKQRTTKASTFV 513
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 707124 710421 + Conep04aG0015900.1 Cone4ag0153 435131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone4ag0153 513 Coils Coil 257 277 - -
Cone4ag0153 513 Gene3D - 126 510 IPR036457 -
Cone4ag0153 513 SMART PP2C_4 129 498 IPR001932 -
Cone4ag0153 513 ProSiteProfiles PPM-type phosphatase domain profile. 138 500 IPR001932 -
Cone4ag0153 513 CDD PP2Cc 151 500 IPR001932 -
Cone4ag0153 513 Pfam Protein phosphatase 2C 259 450 IPR001932 -
Cone4ag0153 513 SUPERFAMILY PP2C-like 151 501 IPR036457 -
Cone4ag0153 513 PANTHER PROTEIN PHOSPHATASE 2C 148 500 IPR015655 GO:0004722(InterPro)|GO:0006470(InterPro)|GO:0006470(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone4ag0153 Cone-Chr4:707124 Cone5ag1149 Cone-Chr5:5179324 2.12E-73 dispersed
Cone4ag0153 Cone-Chr4:707124 Cone7ag0155 Cone-Chr7:639726 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone4ag0153 - - - 0.0