Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone4ag0174 | ATGGGGTGTGTGTTTGGGAAGGAGGTCTCGGCGAAGTCTGTGGAGAAGGGAGGGGAGAGAGAGGGGAGGAGGAGGAAGGACGAGGAGGAGGAGGAGGAGGTGGTCGTTAGGGATTCTACGAAGGGAGAGGTCGGTGAAGCTCAGAATGGTGGGAATCGGAACGAGGCTGACGAGCAGGAGAAGAGCACGAGCACGAGACCGAGAGGTGAACGGAAGCGATCGTCGAAGCCGAATCCGAGGCTGAGTAATCCACCGAATAATGTGCATGGCGAACAAGTGGCGGCTGGATGGCCATCTTGGCTCTCTGCTGTCGCCGGAGAAGCCATTAACGGGTGGACACCTCGGCGAGCTGATACTTTTGAGAAGCTAGACAAAATCGGGCAAGGTACATACAGTAATGTGTACAAAGCCAGAGACTCGTTGACAGGGAAAATTGTTGCACTAAAGAAGGTTCGTTTTGACAATTTGGAGCCTGAGAGTGTAAGATTCATGGCAAGAGAGATTCTTATTCTACGGCGTTTAGATCATCCCAATGTTGTGAAATTGGAAGGTTTAGTCACGTCTAGGATGTCTTGTAGTTTGTATCTTGTATTTGAATATATGGAGCATGATTTGGCTGGACTTGCTGCAAGCCCTGTAATAAAGTTCACAGAGTCTCAGGTTAAATGTTATATGCACCAACTATTATCAGGGCTTGAACACTGTCATAATCGCCATGTGCTTCATCGAGATATCAAGGGCTCGAATCTACTTATTGACAATGGTGGGGTCCTTCAGATTGCTGATTTCGGACTGGCTTCCGTCTTTGATCCGAATCACAAGCATCCCATGACTAGCAGGGTGGTTACTTTATGGTATCGTCCCCCAGAACTACTTCTTGGTGCTACTGATTATGGTGTTGGTGTAGACCTTTGGAGTGCTGGCTGCATTTTGGCTGAGTTGCTGGCTGGAAAGCCTATCATGCCTGGTCGCACTGAGGTGGAACAGCTCCATAAGATCTTCAAGTTATGTGGCTCTCCTTCTGAGGAATACTGGAAAAAGTCAAAGCTGCCACATGCAACTATATTCAAGCCTCAACAATCATACAAGCGATGCATATCAGAAACGTTTAAAGATTTTCCACCTTCATCACTTCCCCTGATCGAGACACTTCTTGCAATCGATCCAGCTGGACGCCAAACTGCCACTGATGCATTGAGCAGTGAATTCTTCACAACTAAGCCTTATGCTTGTGAGCCCTCTAGCCTTCCAAAGTACCCTCCAAGCAAGGAGATGGATGCTAAGCTACGTGATGAAGAAGCTAGAAGGCTGAGAGCTGCCGGAAGAGCTAATGCAGATGGCATGAAGAAAATACGCTCCCGTGATAGAGCTGCTAGGCCAATTCCAGCACCCGATGCCAATGCTGAGCTTCAAGTCAATCTTGATAGGCGGCGACTAATATCACATGCAAATGCAAAGAGCAAGAGTGAAAAGTTTCCTCCACCACACCAAGATGGAACGCTTGGCTATCCTCTGGGCTCTTCACATCACATTGATCCGATATACGATCCCCCAGATGTTCCATTCAGTTCCGCCAATTTCTCCTACTCAAAAGCTCCCATCCAGACTTGGTCTGGCCCTTTGGTCGACCCGGCTGCCCTGGGCCCACCAAGATGGAAAAAACACGGAGCAGGTGAGGGGAAGGGTCACTCAAAACCATCGAAAAGCTCTGCAAGAGTCTGA | 1722 | 48.72 | MGCVFGKEVSAKSVEKGGEREGRRRKDEEEEEEVVVRDSTKGEVGEAQNGGNRNEADEQEKSTSTRPRGERKRSSKPNPRLSNPPNNVHGEQVAAGWPSWLSAVAGEAINGWTPRRADTFEKLDKIGQGTYSNVYKARDSLTGKIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYLVFEYMEHDLAGLAASPVIKFTESQVKCYMHQLLSGLEHCHNRHVLHRDIKGSNLLIDNGGVLQIADFGLASVFDPNHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPHATIFKPQQSYKRCISETFKDFPPSSLPLIETLLAIDPAGRQTATDALSSEFFTTKPYACEPSSLPKYPPSKEMDAKLRDEEARRLRAAGRANADGMKKIRSRDRAARPIPAPDANAELQVNLDRRRLISHANAKSKSEKFPPPHQDGTLGYPLGSSHHIDPIYDPPDVPFSSANFSYSKAPIQTWSGPLVDPAALGPPRWKKHGAGEGKGHSKPSKSSARV | 573 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 812123 | 815815 | + | Conep04aG0018000.1 | Cone4ag0174 | 435152 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone4ag0174 | 573 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 240 | 252 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cone4ag0174 | 573 | SUPERFAMILY | Protein kinase-like (PK-like) | 113 | 409 | IPR011009 | - | |
Cone4ag0174 | 573 | ProSitePatterns | Protein kinases ATP-binding region signature. | 126 | 149 | IPR017441 | GO:0005524(InterPro) | |
Cone4ag0174 | 573 | FunFam | probable serine/threonine-protein kinase At1g54610 | 107 | 202 | - | - | |
Cone4ag0174 | 573 | Gene3D | Transferase(Phosphotransferase) domain 1 | 203 | 443 | - | - | |
Cone4ag0174 | 573 | FunFam | probable serine/threonine-protein kinase At1g54610 | 203 | 444 | - | - | |
Cone4ag0174 | 573 | MobiDBLite | consensus disorder prediction | 440 | 461 | - | - | |
Cone4ag0174 | 573 | SMART | serkin_6 | 120 | 404 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cone4ag0174 | 573 | ProSiteProfiles | Protein kinase domain profile. | 120 | 404 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cone4ag0174 | 573 | MobiDBLite | consensus disorder prediction | 53 | 77 | - | - | |
Cone4ag0174 | 573 | Pfam | Protein kinase domain | 120 | 404 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cone4ag0174 | 573 | MobiDBLite | consensus disorder prediction | 440 | 459 | - | - | |
Cone4ag0174 | 573 | MobiDBLite | consensus disorder prediction | 12 | 40 | - | - | |
Cone4ag0174 | 573 | Gene3D | Phosphorylase Kinase; domain 1 | 107 | 202 | - | - | |
Cone4ag0174 | 573 | CDD | STKc_CDK9_like | 120 | 404 | - | - | |
Cone4ag0174 | 573 | PANTHER | CELL DIVISION PROTEIN KINASE | 119 | 404 | IPR050108 | GO:0000307(PANTHER)|GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0006468(PANTHER)|GO:0008353(PANTHER)|GO:0032968(PANTHER)|GO:0070816(PANTHER) | |
Cone4ag0174 | 573 | MobiDBLite | consensus disorder prediction | 484 | 517 | - | - | |
Cone4ag0174 | 573 | MobiDBLite | consensus disorder prediction | 1 | 92 | - | - | |
Cone4ag0174 | 573 | MobiDBLite | consensus disorder prediction | 534 | 573 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone13ag0248 | Cone-Chr13:1682016 | Cone4ag0174 | Cone-Chr4:812123 | 1.92E-241 | dispersed | |
Cone19ag0228 | Cone-Chr19:1478009 | Cone4ag0174 | Cone-Chr4:812123 | 1.51E-230 | dispersed | |
Cone1ag1738 | Cone-Chr1:58138096 | Cone4ag0174 | Cone-Chr4:812123 | 6.50E-290 | dispersed | |
Cone2ag0826 | Cone-Chr2:34261546 | Cone4ag0174 | Cone-Chr4:812123 | 1.93E-183 | dispersed | |
Cone4ag0174 | Cone-Chr4:812123 | Cone5ag0524 | Cone-Chr5:2209239 | 7.78E-289 | dispersed | |
Cone4ag0174 | Cone-Chr4:812123 | Cone7ag0178 | Cone-Chr7:747060 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
82723 | PF01764 | Lipase_3 | 1.20E-22 | CL0028 | Cone | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone4ag0174 | K08819 | - | vvi:100240938 | 936.021 |