Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone4ag0183 ATGGAACCTGCTCCGCCTACATCGCGTCAATCGCCGCTACATCCAGACTGCGGCGATTACTTACCTAAGGTTTCAGAAATGAATGTTCACGAATTAGTGACCGATGACCCGTCATTAGCTCTATGGGACTTGGACCTCCTGGACTTCACCGTAGATGATCACTTCTCTCTGTCTCTACAACCTGACGACTCGCCAACTATCGCTCCTCAGCTTGAGATTCCAGTAGAAACATCGAGCTCGGATCGGATTCGGAAACGGGACCCGAGATTGACTTGCTCCAATTACATAGCTGGTCGTGTTCCTTGTGCCTGTCCGGAGCTTGATCGGATGCTTGCTGAGGAAGAAGGCGCCCATGGGAACAAGCGACCCAGGACGGCTAGGTCCACGCATGGAAAGGCTATATGCCAGGTTCCAGGATGTGAGGCTGATATCAGAGAGCTCAAAGGATATCATCGACGGCACAGGGTTTGTCTGCGTTGTGCAAATGCGACTGCAGTTCTAGTCAATGGAGATAGTCAAAGATATTGCCAACAGTGTGGAAAGTTTCACGTTTTGTCAGATTTTGATGAAGGAAAGCGGAGTTGTAGAAGGAAATTAGAGCGGCACAACAACCGGCGTCGAAGGAAGCCTAATGATTCAGTAGTTGCAGTGGAAAACGAATCTGAAGTGTGCATTCAGGATGAAGATTTCATTTCTGACCCTGACCCAGGGAAAGATCATTCATCTCTAATCAGCCAAATAGATGAGAAAGAAGCATTGTTAGAGGCCGAAGGAGCACCTACCACCCTTCCCTCAGTTCCTGAGTCCCATGACATTCATTGTTACAGTGGCAAATCATTTGGGGCTTCAGATGGAAACCAAGTGGATGGAATCAAAGATAATTCTAAACATTCACTTTCTCCATCGTCCTGTGTCAATAGGAGTGGTTATTCAACTATGTGCCCGACAGGTCGAATATCGTTCAAGCTTTATGATTGGAATCCTGCGGAGTTTCCTAGAAGACTTCGGCACCAAATATTCCAGTGGTTGGCCAGTATGCCAGTTGAGTTGGAGGGATATATTCGTCCTGGCTGTATAATCCTGACTACATTTATTGCCATGCCAAAGTCTATGTGGGTGAAGTTACTTGAAGATCCTGTAGCACATGTTCATGACTTTGTTGTTACACCTGGAAGGATGCTGTGTGGGAGGGGCACAATGTTTGTTTATCTGAACAACATGATATTCCGTGTTATTGAAGGTGGAGCTTCTGTGACTGAAGTCAAGGTGGAAGTAAACTCTCCAAGACTTCACTATGTGCATCCTATGTGCTTCGAGGCTGGAAAGCCCATGGAGTTTGTTGCTTGTGGAAGTAATTTGGAACAACCCAAACTTCGGTTTCTTGTATCGTTTTCTGGGAAGTATCTGGCGTACGATTATTGTGTTACCTGTCCAAATGAGGAGGCTATGTGTAGTGTCGACGGCCAGTTATACAAGATATTTATTCCCTTTACTGAACCCAATGTCGTTGGTCCTATGTTTATTGAGGTGGAGAACCAGTCAGGATTGTCAAACTTTATCCCTTTACTTATTGGAAATAAAGAAACTTGTTCTGAGATGAAGAAACTGCAGGAGAGACTTGATATTTCTCTGTTCCCAGAAGCTATTGGTCTTTCACCTAAGTCGTGCGAGTTTCTTACACTAAGACAAAAGGCATATACGGAGCTTATCACCGATGTATCATGGAAATTGGCTGTACTGATACTGATATAA 1752 45.15 MEPAPPTSRQSPLHPDCGDYLPKVSEMNVHELVTDDPSLALWDLDLLDFTVDDHFSLSLQPDDSPTIAPQLEIPVETSSSDRIRKRDPRLTCSNYIAGRVPCACPELDRMLAEEEGAHGNKRPRTARSTHGKAICQVPGCEADIRELKGYHRRHRVCLRCANATAVLVNGDSQRYCQQCGKFHVLSDFDEGKRSCRRKLERHNNRRRRKPNDSVVAVENESEVCIQDEDFISDPDPGKDHSSLISQIDEKEALLEAEGAPTTLPSVPESHDIHCYSGKSFGASDGNQVDGIKDNSKHSLSPSSCVNRSGYSTMCPTGRISFKLYDWNPAEFPRRLRHQIFQWLASMPVELEGYIRPGCIILTTFIAMPKSMWVKLLEDPVAHVHDFVVTPGRMLCGRGTMFVYLNNMIFRVIEGGASVTEVKVEVNSPRLHYVHPMCFEAGKPMEFVACGSNLEQPKLRFLVSFSGKYLAYDYCVTCPNEEAMCSVDGQLYKIFIPFTEPNVVGPMFIEVENQSGLSNFIPLLIGNKETCSEMKKLQERLDISLFPEAIGLSPKSCEFLTLRQKAYTELITDVSWKLAVLILI 583
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 853187 858113 + Conep04aG0019200.1 Cone4ag0183 435161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone4ag0183 583 ProSiteProfiles Zinc finger SBP-type profile. 132 209 IPR004333 GO:0003677(InterPro)
Cone4ag0183 583 SUPERFAMILY SBT domain 133 213 IPR036893 GO:0003677(InterPro)|GO:0005634(InterPro)
Cone4ag0183 583 Pfam SBP domain 135 209 IPR004333 GO:0003677(InterPro)
Cone4ag0183 583 Gene3D - 131 196 IPR036893 GO:0003677(InterPro)|GO:0005634(InterPro)
Cone4ag0183 583 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 103 388 IPR044817 GO:0003677(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone4ag0183 Cone-Chr4:853187 Cone6ag0516 Cone-Chr6:2580897 9.64E-24 dispersed
Cone4ag0183 Cone-Chr4:853187 Cone7ag0187 Cone-Chr7:791801 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
45901 PF00198 2-oxoacid_dh 1.60E-74 CL0149 Cone TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone4ag0183 - - - 0.0