Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone4ag0210 | ATGAAGGCCTCGTTTGATCGTCAAGACGAGCCAGCATCGATTATTTTCTCAAACTACACTTCAAATAGCGGCCACGTCCCTAAAGTATGCAAGCATGTTGATCAAGAAATTGGATCTTATACTAATCCTACTATGTCAGAAGATGTTCACGATGATATCATCGTGATCACCAAGTGCTGCAACTCATCCGACCTCCTCTCCCGCCTCCGTGATGGATTAAATCTAAACAACACGCGTTCAGTAATTGCAGAGATGCTTGGAACATTCATATTGATGTTCTGTGTGTGTGGGATATTTGCAAACACACAGCATCGTGGAGAAAAAGGAGCTGTGGGCCTTGTTGAGTATGCAGCCACAGCGGGATTAACAGTCATCGTTGTGATTTTCTGTGTGGGACCCATCTCTGGTGCCCATGTTAATCCTTCTGTTACTCTAGCGTTGGCTACCTTTGGCCATTTTCCATGGTCCAAGGTTCCTTGTTATATATCGGCACAAATAATGGGGTCTGTGTTTGCAACATATACCGGAAAGTTCGTCTACGGCTTAAAACCCCAAGTTGTTACCAATCAGCCACTTCAAGGATGCTATTCTGCTTTCTGGGTCGAGCTAATTGCAACTTCTATCATCATGTTCCTCGCTGCTTCGCTATATTGTGAAACACAATCCGTGGGCCCAGCTTTGTCTGGTGTTGTGGTTGGAATGGCTATTGGGTTGGCTGTACTAATCACAGCGCCCGTTTCAGGTGGATCAATGAACCCAGCAAGATCGTTAGGGCCTGCAATTGTTTCATGGGATTTTAGTAACATATGGATATATGTCGCTGCTCCCACAATTGGAGCTCTTCTTGGTCTTGTCCTTTTCCGGTTTCTACGTCTCAGTCATAACAACAGGCCTTCTTCTTAG | 903 | 45.07 | MKASFDRQDEPASIIFSNYTSNSGHVPKVCKHVDQEIGSYTNPTMSEDVHDDIIVITKCCNSSDLLSRLRDGLNLNNTRSVIAEMLGTFILMFCVCGIFANTQHRGEKGAVGLVEYAATAGLTVIVVIFCVGPISGAHVNPSVTLALATFGHFPWSKVPCYISAQIMGSVFATYTGKFVYGLKPQVVTNQPLQGCYSAFWVELIATSIIMFLAASLYCETQSVGPALSGVVVGMAIGLAVLITAPVSGGSMNPARSLGPAIVSWDFSNIWIYVAAPTIGALLGLVLFRFLRLSHNNRPSS | 300 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 965691 | 967003 | + | Conep04aG0021900.1 | Cone4ag0210 | 435188 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone4ag0210 | 300 | PANTHER | AQUAPORIN NIP2-1 | 70 | 293 | IPR034294 | - | |
Cone4ag0210 | 300 | SUPERFAMILY | Aquaporin-like | 75 | 297 | IPR023271 | - | |
Cone4ag0210 | 300 | ProSitePatterns | MIP family signature. | 138 | 146 | IPR022357 | - | |
Cone4ag0210 | 300 | Gene3D | Glycerol uptake facilitator protein. | 47 | 299 | IPR023271 | - | |
Cone4ag0210 | 300 | PRINTS | Major intrinsic protein family signature | 120 | 144 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Cone4ag0210 | 300 | PRINTS | Major intrinsic protein family signature | 270 | 290 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Cone4ag0210 | 300 | PRINTS | Major intrinsic protein family signature | 201 | 219 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Cone4ag0210 | 300 | PRINTS | Major intrinsic protein family signature | 233 | 255 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Cone4ag0210 | 300 | PRINTS | Major intrinsic protein family signature | 79 | 98 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Cone4ag0210 | 300 | PRINTS | Major intrinsic protein family signature | 157 | 176 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Cone4ag0210 | 300 | Pfam | Major intrinsic protein | 76 | 285 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone4ag0210 | Cone-Chr4:965691 | Cone4ag0541 | Cone-Chr4:2431182 | 1.13E-48 | dispersed | |
Cone4ag0210 | Cone-Chr4:965691 | Cone7ag0218 | Cone-Chr7:940247 | 9.09E-28 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone4ag0210 | K09874 | - | mdm:103403895 | 308.531 |