Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone4ag0218 | ATGCAAGAAATCTTCGGATCAGTTCGATCTTCCTTGAGGTTTCCAGGTGGAGACGATGAAGGAGGATTTGGTGGCCTGGTCGAGAAGATAGGCTCGAGCATCAGAAAATCTCGAATCGGATTGTTTTCTAGACAGTCGCTTGCGGCTCTGCCTCCTGCAATTAAAGTTGATGGGACTCCTCCGATCAGATGGCGGAAAGGTGAGTTGATTGGCTGTGGTGCATTTGGTCGGGTCTATATGGGAATGAACCTTGATTCTGGAGAGCTTCTTGCTGTTAAACAGGTCTCAATTGCGGCCAATAGTGCTTCAAGGGAGAAAACACAGGCTCACATTCGAGAATTAGAGGAAGAGGTGAAACTTCTTAAGAATCTTTCACATCCCAATATCGTTAGATATCTTGGAACCGCTAGAGAGGCAGAATCATTGAATATTCTGCTGGAGTTTGTTCCTGGGGGTTCCATATCATCCCTCTTGGGAAAATTTGGTTCTTTTCCTGAGTCTGTTATAAAAATGTATACAAAGCAGCTCTTACTTGGTCTCGAATACCTTCACAAGAATGGAATCATGCACAGGGATATAAAGGGTGCAAATATTCTTGTTGACAATAAAGGATGTATAAAACTTGCTGACTTTGGTGCCTCCAAAAAAGTTGTAGAGCTGGCTACTGTTAATGGTGCTAAGTCAATGAAGGGCACACCCTATTGGATGGCTCCGGAAGTTATTCTCCAGACTGGTCATAGATTCTCTGCCGATATATGGAGTGTTGGATGCACTGTAATTGAAATGGCGACAGGGAAGCCTCCTTGGAGCCAACAATATCAAGAGGTTGCTGCACTTTTCCATATAGGGACTACTAAATCTCATCCACCCATCCCTGAGCAACTCTCTGCTGAGGCAAAGGATTTTCTGCTAAAATGCTTACAAAAGGAACCAGATTCAAGGCCCTCCGCATCAGACTTGCTACAGCATCCATTTGTTTCACGAGAGCACCGAGATCCTCATCAAGGACTTCGCACCTCAATTATGGAATCTCAAAACCAAACAACACCACCCGGACTGAATCTTAATAACCCCATGACTTCTTCGATCAGAAGATCAACCTGCATGGGGTTAAAGGATGTTTGTGAAATGGGTAGTATGAGGTCCTCAACCATATTTCCTGAGAATTCATTTGGACTAGGATCCCAGTGGGGCTCTAGCAATTTTGATGATGATATGTGTCAGATAGATGATAAAGATGATATGATGCTCGGCCCATCTGTAAATTACAAGTCAGTTATGTTGTCCAGTGACTTAAATAAGAGTTTTAATCCTATGAGTGAGCCTAATGATGACTGGCCATGTAAGTTTGGTGAAAGTCTGGAACCGGACGGAAATAGAATGAACTTATCTCCTGCCGGTGACCCACGAGCATCTGCTAAGGGGGACATTGGCTTCACATTTCCGTGTGGTCCATCTGCAGTTGATGATGATGATGAAGTTACTGAGTCAAAGATTAGAGCCTTCCTGGATGAGAAGGCTTTAGATCTGAAGAAATTACAAACACCTCTGTACGAAGAGTTCTACAGCACATTAAGTGCAGTTGGTACTCCAGCAGCGGCAGCTTCTGTAAAAGGTGAAAATGTTTCTAGTGTTTTAAACCTACCTCCAAAAAGCAAGTCACCAAGTCGATTTCCCAGTAGAAGATTTTCCACCCTTGGCGGTTCTACGACCACGAGCCCTAATAGTCATATAAAATATGGGAGCAGCGTGCATGATAGAGCTTTGCAGGAAATTCCGCTGCCTCATGAGAGTGAATTCAAAGAAATGTTTATTGACCCAAAACAAGAATCCTTTATATCAAGTTTCTCAGAAAGACAACGAAAATGGAAAGAAGAGCTTGATGAAGAGCTTCAAAGGAAGCGAGAAATCATCCGTCAAGCAGGTGCAGGAGCAAAATCACCGTCTGTAAATCGACAGAAAGATCGCCTACCATTTGCATTTTCAGGCAAATAG | 1995 | 43.41 | MQEIFGSVRSSLRFPGGDDEGGFGGLVEKIGSSIRKSRIGLFSRQSLAALPPAIKVDGTPPIRWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVSIAANSASREKTQAHIRELEEEVKLLKNLSHPNIVRYLGTAREAESLNILLEFVPGGSISSLLGKFGSFPESVIKMYTKQLLLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATVNGAKSMKGTPYWMAPEVILQTGHRFSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSHPPIPEQLSAEAKDFLLKCLQKEPDSRPSASDLLQHPFVSREHRDPHQGLRTSIMESQNQTTPPGLNLNNPMTSSIRRSTCMGLKDVCEMGSMRSSTIFPENSFGLGSQWGSSNFDDDMCQIDDKDDMMLGPSVNYKSVMLSSDLNKSFNPMSEPNDDWPCKFGESLEPDGNRMNLSPAGDPRASAKGDIGFTFPCGPSAVDDDDEVTESKIRAFLDEKALDLKKLQTPLYEEFYSTLSAVGTPAAAASVKGENVSSVLNLPPKSKSPSRFPSRRFSTLGGSTTTSPNSHIKYGSSVHDRALQEIPLPHESEFKEMFIDPKQESFISSFSERQRKWKEELDEELQRKREIIRQAGAGAKSPSVNRQKDRLPFAFSGK | 664 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 999361 | 1003333 | + | Conep04aG0022700.1 | Cone4ag0218 | 435196 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone4ag0218 | 664 | Coils | Coil | 620 | 640 | - | - | |
Cone4ag0218 | 664 | CDD | STKc_MAPKKK | 63 | 326 | - | - | |
Cone4ag0218 | 664 | MobiDBLite | consensus disorder prediction | 548 | 577 | - | - | |
Cone4ag0218 | 664 | FunFam | Serine/threonine-protein kinase STE11 | 61 | 154 | - | - | |
Cone4ag0218 | 664 | MobiDBLite | consensus disorder prediction | 639 | 664 | - | - | |
Cone4ag0218 | 664 | FunFam | Mitogen-activated protein kinase kinase kinase 2 | 63 | 352 | - | - | |
Cone4ag0218 | 664 | Pfam | Protein kinase domain | 65 | 326 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cone4ag0218 | 664 | ProSiteProfiles | Protein kinase domain profile. | 64 | 326 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cone4ag0218 | 664 | SUPERFAMILY | Protein kinase-like (PK-like) | 63 | 327 | IPR011009 | - | |
Cone4ag0218 | 664 | Gene3D | Transferase(Phosphotransferase) domain 1 | 63 | 356 | - | - | |
Cone4ag0218 | 664 | Coils | Coil | 97 | 124 | - | - | |
Cone4ag0218 | 664 | ProSitePatterns | Protein kinases ATP-binding region signature. | 70 | 93 | IPR017441 | GO:0005524(InterPro) | |
Cone4ag0218 | 664 | SMART | serkin_6 | 64 | 326 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cone4ag0218 | 664 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 188 | 200 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cone4ag0218 | 664 | PANTHER | MAP KINASE KINASE KINASE SSK2-RELATED-RELATED | 60 | 331 | IPR050538 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone10ag0732 | Cone-Chr10:3706157 | Cone4ag0218 | Cone-Chr4:999361 | 1.86E-241 | dispersed | |
Cone14ag0486 | Cone-Chr14:2365219 | Cone4ag0218 | Cone-Chr4:999361 | 5.78E-10 | dispersed | |
Cone15ag0514 | Cone-Chr15:2507752 | Cone4ag0218 | Cone-Chr4:999361 | 1.25E-07 | dispersed | |
Cone3ag0774 | Cone-Chr3:3980942 | Cone4ag0218 | Cone-Chr4:999361 | 3.05E-241 | dispersed | |
Cone4ag0218 | Cone-Chr4:999361 | Cone8ag0019 | Cone-Chr8:140232 | 1.02E-82 | dispersed | |
Cone10ag0863 | Cone-Chr10:4455192 | Cone4ag0218 | Cone-Chr4:999361 | 9.22E-64 | transposed | |
Cone11ag0732 | Cone-Chr11:5080800 | Cone4ag0218 | Cone-Chr4:999361 | 4.24E-68 | transposed | |
Cone10ag0698 | Cone-Chr10:3519546 | Cone4ag0218 | Cone-Chr4:999361 | 3.48E-36 | wgd | |
Cone4ag0218 | Cone-Chr4:999361 | Cone7ag0228 | Cone-Chr7:966856 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
82725 | PF01764 | Lipase_3 | 6.90E-34 | CL0028 | Cone | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone4ag0218 | K20606 | - | rcu:8271606 | 896.345 |