Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone4ag0220 | ATGATTTCAGATGTAATTTCCGATTCCTTGGATGATATTACAGTTGGTCAGACACTTAAGCGTTCATATGTGACAGAGAAGTTTGTCGTTTTACAAAGACATAGCAGACAAAGTAGTGGAAATGAGAAACCTCAAGAATATGTGCAGAAAGATCTCTTACATCAAAGAAGCTGCCTCTCTCTGGAGGTTGTCTCTGGTCCATCCCGTGGACTTCAATTTTCAATACAGTCAACAGATAGCTCTAAGCTTCCACTGACCCTTGGAAGAGTGTCTTCAAGTGATCTACAGCTAAAGGATTCGGAGGTGTCTGGGAAGCATGCAATGATAAGCTGGAATATAAAGTGGGAGCTGGTGGACATGGGTAGCCTAAATGGAACACTTTTGAATTCTCAACCAATCAACCATCCCGATTACGGAAGTAGACATTGGGGAGATCCAATTGAGCTTACAAGTGGCGACATAATAACTCTTGGTACAACCTCCAGAGTATATGTTCAAATTACACCTGCAACTGAGAGTGAGGTTCCATTTGGAGTTGGTATGGCTTCAGATCCTATGGCTTTTCGGCGAGGAGGAAAGAAGCTTGCTATGGAAGATGTATCCTATTATGAATGGCCCCTTGCTGGAACTGATCAGTTTGGATTATTTGGTATATGCGATGGACATGGCGGAGTTGCGGCTGCTAGATCTGCTAGCGAAATTTTTCCAGAGAGGGTTGCTACCATTTTGTCGGATTCAATGAAAAGGGAAAGAGTTTTATCTCTATGTGACGCTTCAGATGTTCTCAGAGATGCATTTTCTCAGACAGAGGCATCCATGAATCACCATTACGAGGGTTGTACTTCAACATTGCTTCTGGTATGGGCCGATGGAAATGACAAGTACTTTGCGCAATGTGCAAATGTTGGAGACTCTGCTTGTGTTATGAATGTTGATGGGAAACAGATAAAGATGACTGAAGACCATAGAATAACTAGCTATTTGGAAAGACTTAGAATTGAAAAAACAGGAGAGCCATTGAAAGATGGGGAGACGCGTCTATGTGGTTTGAACCTAGCACGTATGCTAGGAGACAAATTTCTCAAACAACAAGATAGTCGTTTTAGTTCAGAGCCTTATGTAAGTCAAGTTGTTCATCTTGATCAAGCACGCAGTGCATTTGCACTCATGGCCAGTGATGGCTTATGGGATGTGATGAGTCTCAAGAAAGCAATTCAGCTAGTTCTTCAGGCAAGGGAGAGATACTGTATGGACTCGGAGAATCCGGCCGAAAAGATTGCAAGTTTTTTGTTGAGTGAGGCGAGAACACTGCGGACTACGGACAACACGTCAATACTTTTCTTAGATTTTAACACTTCCCATAGAAATTCTTGTAAAGTTGAATCATAA | 1389 | 42.12 | MISDVISDSLDDITVGQTLKRSYVTEKFVVLQRHSRQSSGNEKPQEYVQKDLLHQRSCLSLEVVSGPSRGLQFSIQSTDSSKLPLTLGRVSSSDLQLKDSEVSGKHAMISWNIKWELVDMGSLNGTLLNSQPINHPDYGSRHWGDPIELTSGDIITLGTTSRVYVQITPATESEVPFGVGMASDPMAFRRGGKKLAMEDVSYYEWPLAGTDQFGLFGICDGHGGVAAARSASEIFPERVATILSDSMKRERVLSLCDASDVLRDAFSQTEASMNHHYEGCTSTLLLVWADGNDKYFAQCANVGDSACVMNVDGKQIKMTEDHRITSYLERLRIEKTGEPLKDGETRLCGLNLARMLGDKFLKQQDSRFSSEPYVSQVVHLDQARSAFALMASDGLWDVMSLKKAIQLVLQARERYCMDSENPAEKIASFLLSEARTLRTTDNTSILFLDFNTSHRNSCKVES | 462 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 1013385 | 1016338 | + | Conep04aG0022900.1 | Cone4ag0220 | 435198 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone4ag0220 | 462 | Gene3D | - | 53 | 185 | - | - | |
Cone4ag0220 | 462 | FunFam | Protein phosphatase 2C 70 | 186 | 457 | - | - | |
Cone4ag0220 | 462 | PANTHER | PROTEIN PHOSPHATASE 2C | 191 | 450 | IPR015655 | GO:0004722(InterPro)|GO:0006470(InterPro)|GO:0006470(PANTHER) | |
Cone4ag0220 | 462 | SUPERFAMILY | SMAD/FHA domain | 57 | 165 | IPR008984 | GO:0005515(InterPro) | |
Cone4ag0220 | 462 | CDD | FHA_PP2C70-like | 59 | 165 | - | - | |
Cone4ag0220 | 462 | ProSiteProfiles | Forkhead-associated (FHA) domain profile. | 85 | 133 | IPR000253 | GO:0005515(InterPro) | |
Cone4ag0220 | 462 | SUPERFAMILY | PP2C-like | 191 | 451 | IPR036457 | - | |
Cone4ag0220 | 462 | ProSiteProfiles | PPM-type phosphatase domain profile. | 178 | 450 | IPR001932 | - | |
Cone4ag0220 | 462 | Pfam | Protein phosphatase 2C | 186 | 443 | IPR001932 | - | |
Cone4ag0220 | 462 | SMART | FHA_2 | 84 | 133 | IPR000253 | GO:0005515(InterPro) | |
Cone4ag0220 | 462 | FunFam | Protein phosphatase 2C 70 | 54 | 185 | - | - | |
Cone4ag0220 | 462 | Gene3D | - | 186 | 460 | IPR036457 | - | |
Cone4ag0220 | 462 | CDD | PP2Cc | 190 | 450 | IPR001932 | - | |
Cone4ag0220 | 462 | Pfam | FHA domain | 86 | 158 | IPR000253 | GO:0005515(InterPro) | |
Cone4ag0220 | 462 | ProSitePatterns | PPM-type phosphatase domain signature. | 215 | 223 | IPR000222 | GO:0043169(InterPro) | |
Cone4ag0220 | 462 | SMART | PP2C_4 | 172 | 448 | IPR001932 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone4ag0220 | Cone-Chr4:1013385 | Cone4ag1725 | Cone-Chr4:12767565 | 4.64E-20 | dispersed | |
Cone15ag0823 | Cone-Chr15:5471335 | Cone4ag0220 | Cone-Chr4:1013385 | 6.09E-246 | wgd | |
Cone4ag0220 | Cone-Chr4:1013385 | Cone7ag0230 | Cone-Chr7:979564 | 1.44E-302 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone4ag0220 | K01090 | - | mdm:103414648 | 696.427 |