Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone4ag0266 ATGGGTAACGCAGACTATGAGTGCCCTCAACGTGTTCCGATTCCTCAATCCAAAACGTTTTGCGAGTCCTTTAAATCTAATCTCAAAGAAACTTTCTTTGCCGAAGACCCTTTTCGGCAGTTCAAGAAGCAGCCTTTGTCGCGAAAACTCGTACTCGGCCTGAGATATTTCGTTCCGTTTTTCGAATGGGCTCCTCAATATACCCTTGAATTTTTTAAATCTGATCTTATTGCCGGAATCACCATAGCAAGCTTGGCAGTTCCTCAAGGGATAAGTTACGCTAATCTGGCTAGTATACCACCCATCATTGGACTCTATTCGAGCTTTGTGCCCCCATTGATATATGCTATGTTGGGAAGCTCCAAGGATTTGGCAGTGGGGACAGTAGCTGTCGTGTCGCTTTTCATGTCTGACGTGTTAGGCAAAAAGATTGACCCTGTGACGCACCGTGACCAATATGTTCAATTGGTTTTCACGGCTACCTTTTTCGCTGGAGTCATGCAAGCGGCTCTTGGCTTCTTAAGGCTTGGGTTCATAGTGGATTTTCTATCGCATGCTACAATAGTGGGATTCATGGCGGGAGCAGCAACTGTAGTTTGTCTTCAACAACTGAAAGGAATTCTGGGTTTGGTCCATTTCACCCATGAGACTGATGTTGTTTCAGTCATGCGTGCTGTCTTTACCCAAACCCATCTTTGGAGATGGGAAAGTGTCGTTTTGGGCTGTTGTTTTCTATTCTTCCTCAACCTCACGAAACACATTAGCAAGAAAAAACCATCCTTCTTCTGGATATATGCGTTGGCACCTTTGGTCTCTGTCATTCTTGCAAGCCTTCTAGTCTTTCTCACGCACGCTGAAAAGCATGGAGTACAAGTGATTGGGCACCTGAAAAAAGGCTTGAACCCTCTATCAGTACAAGATCTCGCTTTCGGATCTCCGCATCTGTCTACAGTCATCAGGACCGGCTTCATCACTGGCATCATTGGTCTTGCTGAAGGAGCGGCTGTCGGAAGAAGTTTCGCTGCGGTTAAGAACTACCACATTGATGGCAACAAAGAAATGATAGCTTTTGGCATGATGAATATCGTCGGCTCCTGTACTTCTTGCTACTTAACTTCAGGACCATTTTCCCGAACGGCGGTTAACTTCAATGCAGGCAGCAAAACTGCAGTTTCAAACATAGTGATGGCAGTTGCTGTGATGCTCACCCTTTTGTTATTGACCCCATTTTTCCTTTACACTCCTCTTGTGGTCCTATCCGCTATCATTATCACAGCCATGCTTGGCCTCATCAAATACGAATCTGTTATCCACCTTTGGAAAATCGACAAATTCGATTTCACCATTTGCCTTTCGGCTTATATCGGTGTCGTCTTTGGCAATGTCGAAACCGGCCTAATTGTGGCCGTGGCCCTTTCAATTTTGAGGCTACTGTTATCAATTGCAAGACCTAAGACTCTGGTTTTAGGGAATATTCCAAATTCTGCGATCTACAGAAGCATCGATCAGTACCCGAGTGCTAATAACATTCCTGGGATTCTGATTCTTCAAATCGAGGCATCTATTTATTTTGCCAATGCAAATTACCTAAGGGAAAGGATATTAAGGTGGATTTTTGAGGAGGAAGATAGAGTAAAACTTTCAGGAGAGAGCAGCCTACAATACATTGTCCTAAATCTTAGTGCTGTTAGCGGCATTGATACAAGTGGGATAACCATGCTTGAAGAGGTGAAGAAGAACGCTGAAAGAAAGGGTCTGAAGATTGCACTAGCAAACCCACGAAGCGAAGTGCTTAAGAAGCTAAACAAATCGCACTTCATCGAAGAAATCGGACATGAGTGGATCTTTCTGACAGTAGCAGAGGCCGTCGCAGCATGTGACTATATGTTACACACTTGCAAGCAGAATCCTGTTGTGTCTAACCAAGTTTGA 1932 44.31 MGNADYECPQRVPIPQSKTFCESFKSNLKETFFAEDPFRQFKKQPLSRKLVLGLRYFVPFFEWAPQYTLEFFKSDLIAGITIASLAVPQGISYANLASIPPIIGLYSSFVPPLIYAMLGSSKDLAVGTVAVVSLFMSDVLGKKIDPVTHRDQYVQLVFTATFFAGVMQAALGFLRLGFIVDFLSHATIVGFMAGAATVVCLQQLKGILGLVHFTHETDVVSVMRAVFTQTHLWRWESVVLGCCFLFFLNLTKHISKKKPSFFWIYALAPLVSVILASLLVFLTHAEKHGVQVIGHLKKGLNPLSVQDLAFGSPHLSTVIRTGFITGIIGLAEGAAVGRSFAAVKNYHIDGNKEMIAFGMMNIVGSCTSCYLTSGPFSRTAVNFNAGSKTAVSNIVMAVAVMLTLLLLTPFFLYTPLVVLSAIIITAMLGLIKYESVIHLWKIDKFDFTICLSAYIGVVFGNVETGLIVAVALSILRLLLSIARPKTLVLGNIPNSAIYRSIDQYPSANNIPGILILQIEASIYFANANYLRERILRWIFEEEDRVKLSGESSLQYIVLNLSAVSGIDTSGITMLEEVKKNAERKGLKIALANPRSEVLKKLNKSHFIEEIGHEWIFLTVAEAVAACDYMLHTCKQNPVVSNQV 643
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 1188017 1191729 - Conep04aG0027500.1 Cone4ag0266 435244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone4ag0266 643 SUPERFAMILY SpoIIaa-like 509 626 IPR036513 -
Cone4ag0266 643 CDD STAS_SulP_like_sulfate_transporter 504 619 - -
Cone4ag0266 643 FunFam Sulfate transporter 31 483 629 - -
Cone4ag0266 643 Pfam Sulfate permease family 72 452 IPR011547 GO:0016020(InterPro)
Cone4ag0266 643 Pfam STAS domain 504 622 IPR002645 -
Cone4ag0266 643 NCBIfam sulfate permease 59 622 IPR001902 GO:0016020(InterPro)|GO:0055085(InterPro)
Cone4ag0266 643 ProSitePatterns SLC26A transporters signature. 101 122 IPR018045 GO:0008271(InterPro)|GO:0008272(InterPro)
Cone4ag0266 643 Gene3D STAS domain 483 628 IPR036513 -
Cone4ag0266 643 ProSiteProfiles STAS domain profile. 503 626 IPR002645 -
Cone4ag0266 643 PANTHER SULFATE TRANSPORTER 46 626 IPR001902 GO:0005887(PANTHER)|GO:0016020(InterPro)|GO:0055085(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone20ag1225 Cone-Chr20:8126898 Cone4ag0266 Cone-Chr4:1188017 9.78E-234 dispersed
Cone4ag0266 Cone-Chr4:1188017 Cone7ag1578 Cone-Chr7:10808977 4.26E-233 dispersed
Cone11ag0932 Cone-Chr11:7614854 Cone4ag0266 Cone-Chr4:1188017 0 wgd
Cone18ag0634 Cone-Chr18:3289773 Cone4ag0266 Cone-Chr4:1188017 0 wgd
Cone4ag0266 Cone-Chr4:1188017 Cone7ag0273 Cone-Chr7:1141534 6.07E-273 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone4ag0266 K17471 - csv:101203205 993.03