Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone4ag0276 | ATGCCTATAAGGCAGATGAAAGAGAGCTCAGAGCAGCACCTAGTAATCAAAACCCACTTTCACAACTCTATGAACAACCCCCCTGTTCAGAAAGCACCCAAAACTGCCCAAAATGGTAAAGGTCCTCCTAATCAAGAAGCCCAGAACACAAAGACTTCTCCTATGAAAAACAGGGGAAGAAGGCGAGGAAGAGGTGGCCGTAAATCCGATCAAGGTGGTGGTGATGTTTGTCTCCGGCCTAGTTCCAGGCATTGCACCATGGTGAATGCACCTATAGCCCGAGAAAGTACCCCAAACGGGTCTGTGGAAAATGGTTCCAGTTTGTGTGAAGTAGAGATGGGTTTTCCTAGTTCAAGCAAATCTTTGAACTTTGCACCTAGGCCTGGGTTCGGCCAAGTTGGGACTAAGTGTATTGTGAAGGCTAACCATTTCTTATCCGAGTTGCCGGAGAAAGACTTGAATCAATACCATGTAACAATAACTCCTGAAGTAGTATCAAGAACTATGAACCGAGCAATCATGGCTGAGCTAGTGAGGCTATACAGAGAGTCTGATTTAGGAATGAGATTACCTGCTTATGATGGCCGAACGAGTTTGTACACTGCTGGGGAGCTTCCATTTGTTTTTAAGGTGCTCAACATTAAGCTTATAGATGAGGATGGAATGAACGGTAGCAAGAGGGAGAGAGAATATAAGGTGGCTCTGAAATTTGTTGCTCGGGTCAACTTGCATCATTTGGGCCAGTTCTTGGCTGGTAAGCGAGCTGATGCTCCACAAGAAGCTCTTCAAGTACTTGATATCGTACTAAGAGAGCTTTCATCAAAAAGGTACTGCCCTGTTGGGAGATCCTTCTTTTCTCCTCATATAAAGTCACCTCATCGTCTTGGTGATGGGTTGGAGTCTTGGTGTGGATTTTATCAGAGTATTAGGCCTACTCAGATGGGCCTGTCCTTGAATATAGATATGGCTTCCGCTGCCTTTATAGAGCCACTGCCCGTAATTGAGTTTGTAGGCCAGCTTCTGGGGAAAGATGTTTTGTTAAGGCCATTATCTGATTCTGATCGTGTAAAGATTAAGAAGGCCCTTAGAGGAGTGAAAGTTGAAGTTACTCACAGAGTTAATGTACGAAGAAAGTACCGTGTTTCAGGGTTGACATCTCAACCTACTAGAGAACTAGTTTTCCCTGTGGATGATGATTCAACTATGAAGTCAGTAGTAGAGTACTTCCAGGAGGAATATGGCTTCACTATTCAACATGCACATCTCCCTTGCCTTCAAGTTGGAAATCAGAAGAAGGCAAATTATTTACCTATGGAGGCATGCAAAATTGTTGAAGGGCAGCGGTATACTAAAAGGCTGAACGAGCGACAAATTACTGCCCTATTGAAAGTTACTTGCCAAAGACCTAGGGACCGCGAAAATGACATTATACAGACTCTACAGCATAATTCCTATGATCAAGATCCATATGCAAAGGAGTTTGGTATTAAAATCAGTGAAAAAATGGCTTCCGTGGAGGCCCGAATCTTACCTCCTCCTTGGCTTAAATATCATGATACTGGAAAAGAAAAGGACTGTCTCCCTCAAGTTGGTCAGTGGAATATGATGAACAAGAAAATGATCAATGGGATGACTGTAAACCGTTGGGCTTGTATTAACTTCTCTAGGAGTGTTCAAGAGAGCATTGCTCGTGGTTTTTGTAATGAACTTGCTCAAATGTGTCAAGTGTCTGGAATGGAATTCAATCCGGATCCTGTAATTCCAATCTACAATGTGAAGCCCGAGCAAGTGGAAAAAGCCTTGAAGCATGTGTATCATGCTGCTATGAACAAAACCAATGGAAAAGAGTTGGAGTTACTGTTAGCTATTTTGCCTGACAATAATGGATCACTCTATGGTGATCTCAAGCGAATTTGTGAAACCGATCTTGGTATAATCTCTCAATGTTGTCTTACGAAACATGTCTTCAAAATCAGCAAGCAGTACTTGGCTAACGTGTCATTGAAAATCAACGTTAAGTTGGGTGGTAGAAACACTGTTCTTCTAGATGCTATTAGCTGCAGAATACCATTAGTGAGCGATATCCCAACTATCATTTTTGGAGCTGATGTTACTCACCCAGAAAATGGAGAAGATTCTAGCCCTTCTATAGCCGCTGTAGTTGCCTCACAAGATTGGCCGGAGGTTACAAAGTATGCCGGATTGGTCTGTGCTCAAGCTCACAGACAGGAACTCATCCAAGACTTGTATAAAACTTGGCAAGATCCTGTTCGTGGCACTGTTAGTGGCGGTATGATCAGGGATCTTCTTGTTTCCTTTAGAAAGGCAACGGGGCAAAAACCATTAAGGATAATATTTTACAGGGACGGTGTAAGTGAAGGACAGTTTTATCAAGTTTTGCTTTACGAGTTGGATGCAATAAGGAAGGCTTGTGCTTCACTAGAACCGAACTATCAACCACCTGTGACATTCATTGTGGTACAAAAACGACACCATACCCGACTCTTTGCTAACAACCATAGAGACCGAAGCAGCTCAGATAAGAGCGGGAATATTTTGCCTGGAACTGTGGTTGATTCTAAGATATGCCATCCTACAGAATTCGATTTCTATCTCTGTAGCCATGCTGGTATTCAGGGTACAAGCCGGCCAGCTCATTACCATGTTCTTTGGGATGAGAACAATTTTACTGCGGATGGAATCCAGTCACTGACAAACAACCTCTGTTACACCTATGCAAGATGCACCCGTTCTGTTTCTGTTGTCCCTCCAGCATATTATGCGCACTTAGCTGCATTCCGAGCTCGATTCTACATGGAACCAGAAATTCAAGAGAATGACTCGACCGGTCATACTATGAAGAAAACAAGAGGAGCAGGGGAAACCGGAGTTCGCCCATTGCCAGCTTTGAAGGAAAACGTAAAGAGAGTAATGTTTTATTGTTAG | 2946 | 43.18 | MPIRQMKESSEQHLVIKTHFHNSMNNPPVQKAPKTAQNGKGPPNQEAQNTKTSPMKNRGRRRGRGGRKSDQGGGDVCLRPSSRHCTMVNAPIARESTPNGSVENGSSLCEVEMGFPSSSKSLNFAPRPGFGQVGTKCIVKANHFLSELPEKDLNQYHVTITPEVVSRTMNRAIMAELVRLYRESDLGMRLPAYDGRTSLYTAGELPFVFKVLNIKLIDEDGMNGSKREREYKVALKFVARVNLHHLGQFLAGKRADAPQEALQVLDIVLRELSSKRYCPVGRSFFSPHIKSPHRLGDGLESWCGFYQSIRPTQMGLSLNIDMASAAFIEPLPVIEFVGQLLGKDVLLRPLSDSDRVKIKKALRGVKVEVTHRVNVRRKYRVSGLTSQPTRELVFPVDDDSTMKSVVEYFQEEYGFTIQHAHLPCLQVGNQKKANYLPMEACKIVEGQRYTKRLNERQITALLKVTCQRPRDRENDIIQTLQHNSYDQDPYAKEFGIKISEKMASVEARILPPPWLKYHDTGKEKDCLPQVGQWNMMNKKMINGMTVNRWACINFSRSVQESIARGFCNELAQMCQVSGMEFNPDPVIPIYNVKPEQVEKALKHVYHAAMNKTNGKELELLLAILPDNNGSLYGDLKRICETDLGIISQCCLTKHVFKISKQYLANVSLKINVKLGGRNTVLLDAISCRIPLVSDIPTIIFGADVTHPENGEDSSPSIAAVVASQDWPEVTKYAGLVCAQAHRQELIQDLYKTWQDPVRGTVSGGMIRDLLVSFRKATGQKPLRIIFYRDGVSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFIVVQKRHHTRLFANNHRDRSSSDKSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADGIQSLTNNLCYTYARCTRSVSVVPPAYYAHLAAFRARFYMEPEIQENDSTGHTMKKTRGAGETGVRPLPALKENVKRVMFYC | 981 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 1247320 | 1253812 | - | Conep04aG0028700.1 | Cone4ag0276 | 435254 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone4ag0276 | 981 | Pfam | Mid domain of argonaute | 528 | 605 | IPR032473 | - | |
Cone4ag0276 | 981 | Gene3D | paz domain | 324 | 449 | - | - | |
Cone4ag0276 | 981 | CDD | Piwi_ago-like | 489 | 939 | IPR045246 | - | |
Cone4ag0276 | 981 | SMART | PAZ_2_a_3 | 335 | 467 | IPR003100 | GO:0003723(InterPro)|GO:0005515(InterPro) | |
Cone4ag0276 | 981 | SMART | Piwi_a_2 | 619 | 940 | IPR003165 | GO:0003676(InterPro) | |
Cone4ag0276 | 981 | FunFam | protein argonaute 10-like | 688 | 981 | - | - | |
Cone4ag0276 | 981 | FunFam | Protein argonaute-2 | 324 | 450 | - | - | |
Cone4ag0276 | 981 | Pfam | PAZ domain | 357 | 461 | IPR003100 | GO:0003723(InterPro)|GO:0005515(InterPro) | |
Cone4ag0276 | 981 | Pfam | Argonaute linker 1 domain | 279 | 329 | IPR014811 | - | |
Cone4ag0276 | 981 | ProSiteProfiles | Piwi domain profile. | 619 | 940 | IPR003165 | GO:0003676(InterPro) | |
Cone4ag0276 | 981 | FunFam | Argonaute 10 | 509 | 682 | - | - | |
Cone4ag0276 | 981 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 2C | 127 | 948 | - | GO:0003723(PANTHER)|GO:0004521(PANTHER)|GO:0005737(PANTHER)|GO:0035194(PANTHER) | |
Cone4ag0276 | 981 | SMART | DUF1785_2 | 278 | 330 | IPR014811 | - | |
Cone4ag0276 | 981 | Pfam | Argonaute linker 2 domain | 471 | 517 | IPR032472 | - | |
Cone4ag0276 | 981 | Pfam | Piwi domain | 620 | 939 | IPR003165 | GO:0003676(InterPro) | |
Cone4ag0276 | 981 | MobiDBLite | consensus disorder prediction | 22 | 81 | - | - | |
Cone4ag0276 | 981 | Gene3D | - | 688 | 981 | IPR036397 | GO:0003676(InterPro) | |
Cone4ag0276 | 981 | ProSiteProfiles | PAZ domain profile. | 332 | 445 | IPR003100 | GO:0003723(InterPro)|GO:0005515(InterPro) | |
Cone4ag0276 | 981 | MobiDBLite | consensus disorder prediction | 22 | 54 | - | - | |
Cone4ag0276 | 981 | SUPERFAMILY | PAZ domain | 325 | 485 | IPR036085 | GO:0005515(InterPro) | |
Cone4ag0276 | 981 | CDD | PAZ_argonaute_like | 330 | 444 | - | - | |
Cone4ag0276 | 981 | Pfam | N-terminal domain of argonaute | 136 | 269 | IPR032474 | - | |
Cone4ag0276 | 981 | SUPERFAMILY | Ribonuclease H-like | 606 | 940 | IPR012337 | - | |
Cone4ag0276 | 981 | Gene3D | - | 509 | 682 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone13ag0363 | Cone-Chr13:3287540 | Cone4ag0276 | Cone-Chr4:1247320 | 0 | dispersed | |
Cone16ag0768 | Cone-Chr16:8640644 | Cone4ag0276 | Cone-Chr4:1247320 | 3.98E-103 | dispersed | |
Cone4ag0276 | Cone-Chr4:1247320 | Cone7ag0283 | Cone-Chr7:1195885 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone4ag0276 | K11593 | - | vvi:100244311 | 1753.8 |