Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone4ag0304 ATGATCCATGAAGATCGAGATCATCATGAACCCAAACGGCCCCAATTCCCATTAGACCCCAGCTCCTACAAAATCCTTGATGAAATCGGAATTGGCATGAGTGCAATAGTCTACAAGGCCGTATGCATCCCCATGAACTCTGCGATTGTCGCGATCAAATCTATTGATATGGACCGTTCACCGGATTTCGAAGACATCCGACGAGAAGCCAAGACACTCTCTCTCCTCTCCCATCCCAACATCCTCAACTCCTTGTGCTCCTTCACCGTGGACCGCCGTCTCTGGGTCGTCATGCCCTTCATGTCAGGTGGGTCCCTCCAATCTATAATCACATCCTCTTTCCCAAACGGCTTTTCCGAGCCCTGTATTGCCATAGTCCTCAAAGAAATCCTCCATGCCTTGGTTTATCTTCACGACCAAGGCCACCTCCATAGAGACATCAAAGCTGGCAACATTCTGTTAGACTCAAACGGGTCGGTCAAACTTGCTGACTTTGGAGTGTCAACTTCGATTTTTGAGCCGAATTCGAAACATGGGTGTTCTTATTCTTCGTCCTCTTCCGCTTTGATGCTGACTGATTTTACAGGGACCCCGTATTGGATGGCTCCGGAAATGATTCATTCACATAATGGGTATAGTTTTAAAGCTGATATATGGTCTTTTGGGATAACAGCTTTAGAGTTAGCTCATGGACGCCCTCCTTTATCTCACCTTCCTCTTTCCAAGTCCCTTCTTTTAAGGATCACAAAGAGGTTTCGGTTTTCGGATTACGAGAAGAACAAGGATGAGAAAAATAAGAAGTTTTCCAAGGCTTTTAAAGACATGGTTGCTTTGTGTCTTAATCAGGATCCGGCTAAGAGACCTTCGGCTGAAAAGTTGATGAAGCATTCGTTCTTTAAGTACTGTAAAGGGCCGGATTTTCTTGCAAAGAATGTGATGCAGAACTTGCCTAGTGTTGAAGAGAGGTTTAGAGTAAGCAAGCTTACACAAACACCCTCGATTAAAAGCAACGAGGAGGAAGAAGAAGAGGAGGTTATTATTAAACATAGAAGGATTAGTGGATGGAATTTTAACGAGGACGGGTTGAAACTCGACCCTGTCTTTCCAACGATCATGGAAGATGTTTTTAAAGGGGCGAGTGACTCAGGAGGGTCTAGCAGGTCGAACATGAGTTCACCGGATGGGGTCAGAGAAAAGATGTTGCCCCGAGTGGTTAGTGATCACGAGGAGGTGGGAGGGTGGGGGAATGGTGTTGTGGTTGAGAGGGAATCAATGGTGGGAGGATTGATAGTGTTGAAGAAGAGCTTAGAGGAGCAGAGGAGGAAGGTGGTGAATCTGATTGGTCTGTTAGGTGTGGGGGAGGAAGGTGCAGGGGAGGTCAGCACAGGAGAGCAGGAGCAGATGATTACCATGAACCAGTTGATTGAGAGGTTGAAAGTGGAGTTGGAGATTGAGAGGAAGAAAAATTTTGAGTTAGAGATGGAGCTGGAATTTCTCAAGCTTCAATCAGGCCTATAG 1518 46.05 MIHEDRDHHEPKRPQFPLDPSSYKILDEIGIGMSAIVYKAVCIPMNSAIVAIKSIDMDRSPDFEDIRREAKTLSLLSHPNILNSLCSFTVDRRLWVVMPFMSGGSLQSIITSSFPNGFSEPCIAIVLKEILHALVYLHDQGHLHRDIKAGNILLDSNGSVKLADFGVSTSIFEPNSKHGCSYSSSSSALMLTDFTGTPYWMAPEMIHSHNGYSFKADIWSFGITALELAHGRPPLSHLPLSKSLLLRITKRFRFSDYEKNKDEKNKKFSKAFKDMVALCLNQDPAKRPSAEKLMKHSFFKYCKGPDFLAKNVMQNLPSVEERFRVSKLTQTPSIKSNEEEEEEEVIIKHRRISGWNFNEDGLKLDPVFPTIMEDVFKGASDSGGSSRSNMSSPDGVREKMLPRVVSDHEEVGGWGNGVVVERESMVGGLIVLKKSLEEQRRKVVNLIGLLGVGEEGAGEVSTGEQEQMITMNQLIERLKVELEIERKKNFELEMELEFLKLQSGL 505
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 1392541 1394295 + Conep04aG0031600.1 Cone4ag0304 435282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone4ag0304 505 Gene3D Transferase(Phosphotransferase) domain 1 104 352 - -
Cone4ag0304 505 Gene3D Phosphorylase Kinase; domain 1 12 100 - -
Cone4ag0304 505 ProSitePatterns Protein kinases ATP-binding region signature. 29 53 IPR017441 GO:0005524(InterPro)
Cone4ag0304 505 Coils Coil 475 502 - -
Cone4ag0304 505 SMART serkin_6 23 299 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone4ag0304 505 FunFam Serine/threonine-protein kinase BLUS1 12 100 - -
Cone4ag0304 505 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 15 410 IPR047173 GO:0043539(InterPro)|GO:1902456(PANTHER)
Cone4ag0304 505 ProSiteProfiles Protein kinase domain profile. 23 299 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone4ag0304 505 SUPERFAMILY Protein kinase-like (PK-like) 14 317 IPR011009 -
Cone4ag0304 505 Pfam Protein kinase domain 23 299 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone4ag0304 Cone-Chr4:1392541 Cone8ag0549 Cone-Chr8:4082559 1.03E-97 dispersed
Cone4ag0304 Cone-Chr4:1392541 Cone18ag1363 Cone-Chr18:9363976 2.20E-103 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
82730 PF01975 SurE 7.40E-52 No_clan Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone4ag0304 K08835 - csv:101215648 583.948