Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone4ag0326 ATGGCGCGGAACCAGATTGAAGTACTAAATGCGCTTGACATAGCAAAGACCCAACTATACCATTTCACGGCGATTATTATTGCCGGAATGGGCTTTTTCACAGATGCATACGATCTCTTTTGCATCTCTGTTGTTTCCAAACTGTTGGGCCGGATTTATTACCACGCTCCGGGATCAAAGAAGCCCGGCTCGCTCCCACCTAATGTTGCTGCCGCAGTGTCAGGCGTCGCCCTATGCGGTACTCTAGCCGGACAGCTCTTCTTCGGCTGGCTCGGTGACAAGATGGGCCGTAAAAAGGTCTACGGTGTAACCCTTTTACTCATGGTCGTCTGCTCTATCGGGTCGGGACTCTCTTTCGGTAGCAGCGCAAAAGGTACAATAACAACGCTCTGCTTTTTCCGATTCTGGCTTGGCTTCGGCATCGGCGGCGACTACCCCCTCTCGGCCACAATCATGTCTGAATACGCTAACAAAAAGACACGTGGTGCATTTATAGCCGCAGTTTTCGCCATGCAAGGTTTTGGAATTTTGGGGGGAGGAATCGTGGCTTTAATTGTAGCCGGCACATTTAACGACCATTTCCCGGCTCCACCGTACAATAAAAGCGAGTTGGGATCGGTTGTGCCCCAAGCCGATTATGTCTGGCGGCTCGTTTTCATATTTGGCGCTCTGCCAGCTGCTCTCACTTACTATTGGCGTATGAAGATGCCTGAGACAGCTCGCTACACGGCTCTCGTCGCCAAGAACGCAAAACAAGCTGCTTCAGACATGTCGAAAGTCCTACAGGTGCAACTCGAAGCAGATCAGGAGAAGTTAGAGAGGATTGTCGCCGAACCGAGAAATAGCTTCGGTTTGTTTTCAAAAGAATTCGCGAAACGACATGGGCTTCATTTACTCGGGACTGCAAGCACATGGTTTTTACTGGACATCGCTTTTTACAGTCAGAATCTGTTCCAGAAGGACATTTTTACCGCGATCGGTTGGCTCCCTTCAGCAGCAACCATGAGTGCACTAGAAGAGACATACAAAATCGCAAGGGCACAAACGTTTATAGCCCTCTGTGGGACCGTGCCGGGCTATTGGTTCACAGTGGCTCTAATCGACCATGTTGGGCGGTTCGCTATTCAGTTGATGGGCTTCATCATGATGACAGTTTTCATGTTTGCGCTTGCTTTTCCTTATCATCACTGGACCTTGAAGCCCAATCGGATCGGGTTTGTTGTCATGTATTCCTTGACCTTTTTCTTCGCTAACTTTGGGCCTAATTCAACGACGTTTATTGTGCCGGCGGAGATATTCCCTGCAAGGCTGAGGTCCACATGTCATGGAATATCTGCTGCGGCTGGAAAGGCCGGCGCTATTATCGGTGCGTTTGGGTTTCTGTATGCAGCCCAAAACCAAGACAAGACCAAAACAGATGCGGGTTACCCTCCTGGTATTGGGGTAAAGAACTCGCTCATTGTGCTTGGGTGCATTAATCTGTTGGGAGCAATTTTTACGTTGTTGGTTCCAGAACCGAATGGTAAGTCACTTGAAGAATTGACCGGTGAGAATGAAGAAGAATGA 1566 49.17 MARNQIEVLNALDIAKTQLYHFTAIIIAGMGFFTDAYDLFCISVVSKLLGRIYYHAPGSKKPGSLPPNVAAAVSGVALCGTLAGQLFFGWLGDKMGRKKVYGVTLLLMVVCSIGSGLSFGSSAKGTITTLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILGGGIVALIVAGTFNDHFPAPPYNKSELGSVVPQADYVWRLVFIFGALPAALTYYWRMKMPETARYTALVAKNAKQAASDMSKVLQVQLEADQEKLERIVAEPRNSFGLFSKEFAKRHGLHLLGTASTWFLLDIAFYSQNLFQKDIFTAIGWLPSAATMSALEETYKIARAQTFIALCGTVPGYWFTVALIDHVGRFAIQLMGFIMMTVFMFALAFPYHHWTLKPNRIGFVVMYSLTFFFANFGPNSTTFIVPAEIFPARLRSTCHGISAAAGKAGAIIGAFGFLYAAQNQDKTKTDAGYPPGIGVKNSLIVLGCINLLGAIFTLLVPEPNGKSLEELTGENEEE 521
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 1480205 1481809 + Conep04aG0033800.1 Cone4ag0326 435304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone4ag0326 521 SUPERFAMILY MFS general substrate transporter 12 514 IPR036259 -
Cone4ag0326 521 ProSiteProfiles Major facilitator superfamily (MFS) profile. 24 508 IPR020846 GO:0022857(InterPro)
Cone4ag0326 521 FunFam Inorganic phosphate transporter 1-6 20 521 - -
Cone4ag0326 521 NCBIfam phosphate:H+ symporter 11 517 IPR004738 GO:0005315(InterPro)|GO:0006817(InterPro)|GO:0016020(InterPro)
Cone4ag0326 521 CDD MFS_PhT 25 506 - -
Cone4ag0326 521 Gene3D MFS general substrate transporter like domains 272 521 IPR036259 -
Cone4ag0326 521 Gene3D MFS general substrate transporter like domains 20 266 IPR036259 -
Cone4ag0326 521 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 12 513 - -
Cone4ag0326 521 Pfam Sugar (and other) transporter 26 514 IPR005828 GO:0016020(InterPro)|GO:0022857(InterPro)|GO:0055085(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone15ag0160 Cone-Chr15:773131 Cone4ag0326 Cone-Chr4:1480205 9.00e-317 dispersed
Cone17ag1273 Cone-Chr17:9167568 Cone4ag0326 Cone-Chr4:1480205 4.25E-284 dispersed
Cone17ag1477 Cone-Chr17:9970144 Cone4ag0326 Cone-Chr4:1480205 3.90E-173 dispersed
Cone20ag0453 Cone-Chr20:2323048 Cone4ag0326 Cone-Chr4:1480205 1.31E-283 dispersed
Cone20ag0981 Cone-Chr20:6960757 Cone4ag0326 Cone-Chr4:1480205 1.90E-58 dispersed
Cone4ag0326 Cone-Chr4:1480205 Cone5ag0654 Cone-Chr5:2795789 1.14E-37 dispersed
Cone4ag0326 Cone-Chr4:1480205 Cone4ag0327 Cone-Chr4:1490387 9.23E-293 tandem
Cone14ag0148 Cone-Chr14:726930 Cone4ag0326 Cone-Chr4:1480205 0 wgd
Cone15ag0159 Cone-Chr15:769569 Cone4ag0326 Cone-Chr4:1480205 1.18E-106 wgd
Cone17ag0612 Cone-Chr17:3378888 Cone4ag0326 Cone-Chr4:1480205 2.94E-302 wgd
Cone20ag0800 Cone-Chr20:5678006 Cone4ag0326 Cone-Chr4:1480205 3.57E-157 wgd
Cone4ag0326 Cone-Chr4:1480205 Cone4ag1129 Cone-Chr4:9741679 1.33E-300 wgd
Cone4ag0326 Cone-Chr4:1480205 Cone7ag0321 Cone-Chr7:1397719 1.31E-292 wgd
Cone4ag0326 Cone-Chr4:1480205 Cone7ag0999 Cone-Chr7:7720701 3.27E-57 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone4ag0326 K08176 - csv:101213007 851.277