Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone4ag0327 ATGGCAAGAGAGCAGTTACAAGTGCTGAATGCACTAGACGTTGCGAAAACGCAATGGTACCATTTCACAGCTATTGTGATTGCCGGGATGGGGTTCTTCACGGATGCTTACGATCTGTTTTGCATCTCTCTCGTGACGAAACTGTTAGGACGCATTTACTACTACGAAGAAGGCTCTAGCAGACCTGGTGTGTTGCCTTCAAATGTATCATCTGCTGTCACTGGAGTTGCCTTCTGTGGGACCCTTGCAGGGCAACTGTTTTTCGGTTGGCTCGGCGACAAAATGGGCCGGAAACGGGTCTATGGAATGACCCTTATGATGATGGTTCTTTGCTCTATTGGTTCTGGTCTCTCTTTTAGCAAAGACCCTACAGCTGTTATTACAACTCTCTGCTTTTTCCGGTTTTGGCTCGGCTTTGGCATTGGTGGTGACTACCCACTTTCAGCGACTATCATGTCTGAATATGCCAACAAGAAGACTCGAGGTGCTTTCATTGCTGCAGTCTTTGCTATGCAAGGCTTTGGGATTTTAGCCGGTGGCATGGTTGCAATTATAGTCTCAGCAGCTTTCAAGGCTAAATACGATGTCCTTCCATATGAACTTGATCCAGTGGGCTCCACTGTGCCCCAAGCTGATTATGTTTGGCGGATTATCGTTATGTTCGGTGCATTGCCAGCTCTGCTTACTTATTACTGGCGTATGAAGATGCCTGAAACTGCTCGGTACACGGCTTTGGTAGCCAAGAATGCTAAACAAGCTGCAGCCGATATGTCCCGAGTAATGCAGGTTGATTTAGAAGCGGAACAGGAAAAAATAGATCAGGCCCAGGATAAATCCAACGATTTCGGGTTGTTCACAAAGCAGTTTTTACGCCGCCATGGGTTTCACTTGCTTGGAACCACCACCACTTGGTTCCTATTGGACATAGCTTTCTACAGTCAAAATCTATTTCAGAAGGACATCTTCACTGCTATAGGCTGGCTTCCAGACGCGAAAACCATGAATGCTCTTGAGGAAGTGTACAAAATTGCAAGGGCTCAAACTCTCATAGCTCTTTGCAGCACCGTTCCAGGTTATTGGTTTACAGTTGCCTTGATTGACAAAATAGGAAGATTTGCAATTCAATTAATGGGCTTCTTCTTCATGACCGTTTTCATGTTTGCCTTGGCCATCCCTTACCACCACTGGACTCTAAAAGCAAACCGAATTGGTTTTGTTATAATGTACTCTCTGACATTCTTCTTCGCCAATTTTGGGCCAAACGCCACGACATTTGTTGTACCGGCTGAGATTTTCCCAGCAAGGCTAAGATCTACCTGCCACGGTATATCAGCTGCTGCTGGAAAGGCAGGGGCAATTGTTGGAGCATTTGGATTTCAATATGCCGAAAAGGGGATTGGAGTTAAAAAGACACTTCTTGTTCTTGGTGTGATCAATGCCCTTGGAGTGATGTTCACTTTCTTGGTCCCAGAATCAAAGGGAAAATCGCTTGAGGAAATGTCTGGAGAAGCTGAGGAAGAAATGGAAGTAACTTCGGATTCAAAACCCCCGCAGGAAGGTAGTTACGACACTAGAACTGTTCCCGTATGA 1590 45.72 MAREQLQVLNALDVAKTQWYHFTAIVIAGMGFFTDAYDLFCISLVTKLLGRIYYYEEGSSRPGVLPSNVSSAVTGVAFCGTLAGQLFFGWLGDKMGRKRVYGMTLMMMVLCSIGSGLSFSKDPTAVITTLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGMVAIIVSAAFKAKYDVLPYELDPVGSTVPQADYVWRIIVMFGALPALLTYYWRMKMPETARYTALVAKNAKQAAADMSRVMQVDLEAEQEKIDQAQDKSNDFGLFTKQFLRRHGFHLLGTTTTWFLLDIAFYSQNLFQKDIFTAIGWLPDAKTMNALEEVYKIARAQTLIALCSTVPGYWFTVALIDKIGRFAIQLMGFFFMTVFMFALAIPYHHWTLKANRIGFVIMYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAAAGKAGAIVGAFGFQYAEKGIGVKKTLLVLGVINALGVMFTFLVPESKGKSLEEMSGEAEEEMEVTSDSKPPQEGSYDTRTVPV 529
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 1490387 1493541 + Conep04aG0033900.1 Cone4ag0327 435305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone4ag0327 529 CDD MFS_PhT 25 493 - -
Cone4ag0327 529 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 9 499 - -
Cone4ag0327 529 NCBIfam phosphate:H+ symporter 11 503 IPR004738 GO:0005315(InterPro)|GO:0006817(InterPro)|GO:0016020(InterPro)
Cone4ag0327 529 Pfam Sugar (and other) transporter 26 501 IPR005828 GO:0016020(InterPro)|GO:0022857(InterPro)|GO:0055085(InterPro)
Cone4ag0327 529 MobiDBLite consensus disorder prediction 514 529 - -
Cone4ag0327 529 MobiDBLite consensus disorder prediction 498 529 - -
Cone4ag0327 529 Gene3D MFS general substrate transporter like domains 20 517 IPR036259 -
Cone4ag0327 529 FunFam Inorganic phosphate transporter 1-6 20 515 - -
Cone4ag0327 529 Coils Coil 258 278 - -
Cone4ag0327 529 SUPERFAMILY MFS general substrate transporter 12 501 IPR036259 -
Cone4ag0327 529 ProSiteProfiles Major facilitator superfamily (MFS) profile. 24 494 IPR020846 GO:0022857(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone15ag0159 Cone-Chr15:769569 Cone4ag0327 Cone-Chr4:1490387 1.94E-101 dispersed
Cone20ag0982 Cone-Chr20:6961827 Cone4ag0327 Cone-Chr4:1490387 2.38E-46 dispersed
Cone4ag0327 Cone-Chr4:1490387 Cone7ag0321 Cone-Chr7:1397719 0 dispersed
Cone4ag0326 Cone-Chr4:1480205 Cone4ag0327 Cone-Chr4:1490387 9.23E-293 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone4ag0327 K08176 - csv:101209582 893.649