Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone4ag0348 ATGGTGGAGAACTCCTCAGAATCCTTAGCAACTAGAGACTATTCAGCAAGTGGTTATTCATCTCGAACCGGAGAAGTGGAAACAACAAAAGTGGATACAAGCAACATCGAAGAGGCTGAGTCTTCTCTTAGGGAGAGTGGTTTTCTTAACTATGAGGAGGCAAGAGCTTTGCTAGGAAGGCTAGAGTATCAAAAGGGTAACATAGAAGGTGCCCTTCAAGTATTTGAAGGAATAGATATTTCCGCTGTTACTCCTCGTATGAAAGTTTGCATCTCTAGAAAATGCGAACAGAATAGACGCCGTTCTCAAAGCGATGCTCTCCCTACTATGTCCATGCATGCTGTTAGTTTACTTTTAGAAGCAATCTTCCTTAAGGCCAAATCATTCCAGGGTTTGGGAAGGTTTTCAGATGCGGCTCAATCATGCAAAGTTATATTGGACACTGTTGAATCGGCATTACCTGAAGGCTTGCCGAAAAATTTTTATTTCGACAGTAAATTACAAGAGACTCTAAGCAGGGCAGTGGAGTTGCTCCCAGAGTTGTGGAAACTTTCTGGGGCCCTCCAGGAATCTATCTTGTCATACAGGCGGGCCCTCCTTTATCATTGGAATCTGGATGTGATAACCACTGCTAAGATTCAGAAGGAATTTTCCGTCTTCCTTCTTTACAGTGGTTGTAATGCAAATCCTCCGAATCTTGGATCACAGATGGAAGGATCATTTATTCCGAGAAACAATTTAGAAGAGGCTGTTCTTCTGTTACTGATTCTGTTAAGAAAGTATATTCTCGGAAGGATCGTGTGGGACCCATCGATCATGGATCACCTTTCATTCGCTCTCTCTGTTTCAGGGGACTTAACAGCATTAGCACATCAAGTCGAACAGCTGCTTCCTGGAATTATAGAGAGGCAAGAGAAATATTTCACTCTTGCTCTCTGTTACTTTGCAGCAGGTGAAGATATGGTTGCTTTGAATCTCTTGAGAAATTTTTTGAAGGACAGGGAGAGTACTAATTGCATACAGGAACTGTTGCTTGCTTCTAAACTTTGTGGGGAGAATTCAGTTTTTCTCGATGAAGGTACTGGTTATACTCACAAAGCGATTTCTAAATTGAATGGAAAATGCGACAAGAAATTACGCATGGCAAATTGCTTACTGGGGATTTTATTGTCTGCTCAATCCCGGTCAGTTGTTTCCGATTCAGAGAGGGTGTTGAAGCAATCCGAGGCACTTCAAACCCTGGAAAATGCAGAGAAAATGATGAGGGAAAAAGATCCTTATATCCTTTTTCATCTTTGTCTTGAACATGCAGAGCAAAGAAAATTGGATATTGCGCTTTATTATGCAAAAGCGTTAATGAAACTTGATGTAGGGTCTAATGTGAAAGTGTATGCGCTTTTGGCACGAATTTTATCGGCTCAAAAACGATTTGTTGATGCTGAGACTGTGATTAATGCTGCCCTTGATCAGACTGGAAGGTGGGACCAAGGAGAGCTTTTGCGAACCAAAGCTAAGCTTCAGATTGCACAGGGCCGGATAAAGAATGCCATTGAGACTTATACTCATCTTCTTGCTGTTCTTCAAGTTCGGAATAAAAGTTTTTCTGTTTGGAAGAAACTTCCCAAGGATAAGAGAAACCTAGATAGAAGCCTGGAAATGGAAACATGGCATGATTTGGCTAACATCTATACAAGTTTATCTCAATGGCGTGATGCAGAGGTCTGTCTTTCGAAATCTCGGCTCATCAATCCTTATTCCGCTTCTAGATGGCACTCCACAGGTTTATTGTACGAGGCAAAAGGAGTTAAACAAGAAGCTCTGAGGGCATATATGAAAGGGTTGGATGTGGACCCCACCCATGTCCCGAGCTTGATAGCTACTGCTTGCATTCTCAGACAGCTCAGTAGCCAGTCATTGCCTTCCATGAGGAGCTTGCTCACTGATGCGCTTAGACTAGATCGAACTAACCCTTCTGCTTGGTATAATCTTGGGCTGATCTATAAAGATGATGCTGGGGCATCTTCAATAGAGGTTGCTGAATGCTTTGAGGCTGCTACTCTTCTTGAAGAATCCGCACCTATTGAGCCGTTTCGATGA 2097 42.44 MVENSSESLATRDYSASGYSSRTGEVETTKVDTSNIEEAESSLRESGFLNYEEARALLGRLEYQKGNIEGALQVFEGIDISAVTPRMKVCISRKCEQNRRRSQSDALPTMSMHAVSLLLEAIFLKAKSFQGLGRFSDAAQSCKVILDTVESALPEGLPKNFYFDSKLQETLSRAVELLPELWKLSGALQESILSYRRALLYHWNLDVITTAKIQKEFSVFLLYSGCNANPPNLGSQMEGSFIPRNNLEEAVLLLLILLRKYILGRIVWDPSIMDHLSFALSVSGDLTALAHQVEQLLPGIIERQEKYFTLALCYFAAGEDMVALNLLRNFLKDRESTNCIQELLLASKLCGENSVFLDEGTGYTHKAISKLNGKCDKKLRMANCLLGILLSAQSRSVVSDSERVLKQSEALQTLENAEKMMREKDPYILFHLCLEHAEQRKLDIALYYAKALMKLDVGSNVKVYALLARILSAQKRFVDAETVINAALDQTGRWDQGELLRTKAKLQIAQGRIKNAIETYTHLLAVLQVRNKSFSVWKKLPKDKRNLDRSLEMETWHDLANIYTSLSQWRDAEVCLSKSRLINPYSASRWHSTGLLYEAKGVKQEALRAYMKGLDVDPTHVPSLIATACILRQLSSQSLPSMRSLLTDALRLDRTNPSAWYNLGLIYKDDAGASSIEVAECFEAATLLEESAPIEPFR 698
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 1595449 1597901 + Conep04aG0036000.1 Cone4ag0348 435326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone4ag0348 698 ProSiteProfiles TPR repeat profile. 587 620 IPR019734 GO:0005515(InterPro)
Cone4ag0348 698 SUPERFAMILY TPR-like 498 668 IPR011990 GO:0005515(InterPro)
Cone4ag0348 698 MobiDBLite consensus disorder prediction 1 36 - -
Cone4ag0348 698 Gene3D Tetratricopeptide repeat domain 544 693 IPR011990 GO:0005515(InterPro)
Cone4ag0348 698 SMART tpr_5 587 620 IPR019734 GO:0005515(InterPro)
Cone4ag0348 698 SMART tpr_5 553 586 IPR019734 GO:0005515(InterPro)
Cone4ag0348 698 SMART tpr_5 497 530 IPR019734 GO:0005515(InterPro)
Cone4ag0348 698 SMART tpr_5 461 494 IPR019734 GO:0005515(InterPro)
Cone4ag0348 698 PANTHER PROTEIN NPG1 2 698 IPR043376 -
Cone4ag0348 698 MobiDBLite consensus disorder prediction 1 30 - -
Cone4ag0348 698 SUPERFAMILY TPR-like 424 525 IPR011990 GO:0005515(InterPro)
Cone4ag0348 698 Gene3D Tetratricopeptide repeat domain 28 543 IPR011990 GO:0005515(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone11ag0778 Cone-Chr11:5968850 Cone4ag0348 Cone-Chr4:1595449 5.48E-290 dispersed
Cone4ag0348 Cone-Chr4:1595449 Cone9ag0296 Cone-Chr9:1275625 1.80E-209 dispersed
Cone4ag0348 Cone-Chr4:1595449 Cone6ag0261 Cone-Chr6:1199416 5.81E-216 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone4ag0348 K21843 - mdm:103446393 1062.37