Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cone4ag0376 | ATGGCTGGTAATCTCAACCCAGTGGTTGGATCACATGTTTGGGTTGAGGATCCTGAGGTAGCTTGGATAGATGGAGAAATTGTAGAACTTGATGGTGAAGATATCACAGTGAAGTGTACTGATGCAAATACAATCGAGGCCAAAGCATCTGATGTCTACCCAAAAGATCCCGAGTTTCCTTCATGTGGGGTAGATGATATGACAAGACTGGCTTACCTACATGAACCTGGTGTTCTCCAGAATCTAAAATCTCGTTATGATATAAATGAAATATATACTTACACAGGAAATATACTGATAGCTGTTAACCCTTTCCGAAGACTGCCACATTTATATGATCATCAAATTATGGAACATTACAAGGGGGCAACTTTTGGTGAGCTGAGCCCACATCCTTTTGCCATTGCAGATTCTGCATACAGGTTGATGATCAATGAAGGTGTAAGCCAGTCAATTTTGGTCAGCGGGGAAAGTGGAGCTGGTAAAACTGAGAGCACGAAGATGCTTATGAGATATCTGGCTTACATGGGAGGAAGATCTGGAGGGAAATCTGCTACTGGGGAACGGTCAGTGGAGCAGCAAGTACTGGAGTCCAATCCAGTTTTAGAAGCCTTCGGAAATGCAAAGACTGTTCGAAACAATAATTCAAGCCGTTTTGGTAAATTTGTGGAGATTCAGTTTGATCGGAATGGTAGAATTTCGGGAGCTGCCATCAGGACTTATTTATTGGAGCGATCCCGTGTTTGCCAATTGTCTGATCCTGAGCGAAATTATCATTGCTTTTATATGCTTTGTGCTGCACCACCAAAGGACATTGAAAGGTACAAATTGGGGAATCCAAGAACATTCCATTATCTTAATCAGTCTAACTTCTACGAGCTGGATGGATTGGATGAGTCTAAGGAGTACCTTGCTACTAGAAAGGCAATGGAAGTTGTTGGAATGAGTTCTGATGAGCAGGATGCAATTTTTAGAGTGGTAGCTGCAGTACTCCACTTAGGAAATATTGAGTTTGTAAAGGGGGAGGAAGGTGATTCATCTGAACCTAAAGACAATAAATCTCGCTTTCATCTCAAAGTGGTGGCTGAACTTTTAATGTGCGACGAGAAGTCTCTTGAAGACTCCTTATGCAAACGTGTGATTGTGACACGCGATGAAGCCATAGCAAAATATCTTGATCCTGAAAGTGCAGCTGTTAATAGGGATGCTTTAGCCAAAATTGTTTATTCTAAGTTATTTGACTGGATTGTCAACAAGATTAATAATTCAATCGGTCAAGATCCAGATTCAAAAAACTTAATTGGGGTTCTGGATATTTATGGATTTGAGAGTTTCAAGACAAACAGTTTCGAGCAATTCTGTATCAATTTGACTAATGAGAAATTGCAGCAGCATTTCAATCAGCATGTTTTCAAGATGGAGCAAGAAGAATACACCAAAGAGGAAATTGACTGGAGTTATATTGAGTTCATTGATAATCAGGACGTTCTTGATCTCATTGAGAAGAAACCTGGAGGCATTATTGCACTTCTTGATGAGGCCTGTATGTTTCCAAGATCAACACATGAGACATTTGCAGAGAAGCTTTATCAAACTTTTAAGGACCACAAACGCTTTAGCAAGCCCAAACTCTCACGTAGTGGCTTCACTATTTCTCATTATGCTGGTGATGTTACTTACCAAACTGAACTTTTCTTGGATAAGAATAGAGATTTTGTTGTCCCTGAGCATCAAGCTCTTTTGCGTGCTTCTAATTGCCCATTTGTTTCTTCTCTTTTCCCACCTTTACCGGAAGAATCTTCCAAATCAACGAAGTTCTCGTCAATAGGTTCTCAATTTAAGCTACAATTGCAAGCATTGCTTGAAACACTGAGTGTCACTGAGCCTCACTATATTCGTTGTGTAAAGCCAAATAATCTTCTTAAGCCAGGCATATTTGAAAACAGTAGTGTTTTACAACAGCTCCGATGTGGGGGAGTCATGGAAGCTATTAGGATCAGTTGTGCTGGCTATCCCACTAGAAAGACATTGGATGAATTTGTTGGGCGGTTTGGAATCCTGGAACCCGGTGTTTTGAATGGGAGGTGTGATGAGGTCACAGCTTGCAAGAGTCTTATGGCGAAGGCAAACCTTGAAGGTTATCAGATTGGTAAAACAAAAGTGTTTCTTAGAGCTGGTCAAATGGCAGATTTAGATGCTTGCCGAAATGTGGTCTTGGGAAGATCAGCTATCATTATCCAAAGTAAAGTTCGCTCATACTTGGGTCGCAAACATTTCCTTCTTTTCCGGATTTCTGCCATACAGATCCAGGCCTTGTGCAGAGGTCAAGTTGCATGCGAGCAGTATGAACATTTGAGAAGGGAAGCTGCTTCTATTCAAATCCAGAAACATTGCCGCATGTATCTTGCTAGGAGCGGTTTCCAAAAATTATGCTCTTCAGCTGTTTACCTTCAATCTGGTTTTCGTGGGATGGATGCTCGTAAAGTGTTTAAGTTCAGGAGGCAGATGAGAGCTGCAATTATCATTCAGAGTCATTCTCGGGAACACTTGGCCCGCCTTCACTACTTGAGGCTTAGAAAATCAGTAATAACCTTACAATGTGCCTGGAGGGCAAAAATGGCACGTAGAGAACTACGAAACCTTAAAATGGCTGCTAAGGAAACGGGTGCCCTTCAAGCTGCCAAAACTAAGCTGGAGAAGGAAGTGGAGGAACTAACATGGCGATTACAGCTGGAGAAAAGAATGAGGGCGGACCTTGAAGAAGCCAGAACCCTGGAAAGCACAAAGTTGCAGTCTGCTTTAGAAGAGATGCAAATTCAATTTCAGGAAACCAAAGAACTGCTAAACAAGGAACGCGAAGCTGCAAAAAGAGCAGCTGAACAAGTCCCAGTTATACAGGAGGTCCAAGTTGTTGACCAGGAAATGGTCAATAAGCTTAGTGCCGAAAATGAACATCTTAAGGCTCTGGTAGATTCACTGGAAAAAAGAATTGATGAAACAGAGAGAAAATTTGAAGAAACCAACAAGCTTAGCGAAGAGCGGTTAAAGCAGGCAACGGACGCAGAATCAAAGATAATTGAACTCAAGACTAACATGCAGAGGATGGAAGAAAAACTAACTGACATGGAAACAGAGGACCAAATTCTACGGCAACAGGCATTGCGGAATTCCTCTTCAAGAAAGATGTCAGACCATTTAGGAATTCCGACCACTCAGCCTTTGGAGAATGGTCATGGACCACTGCGTACTACATCAACAAAAAAGTTTGGTACAGAGGCTGACATGAATCTTAGAAGATCCCAAATTGAAAGGCAAAATAAGAGTGTTGATGCTCTAATGAACTGTGTGACACAAGATGTAGGGTTTAGTCAAGGAAAACCGGTTGCAGCTTTTACCATTTATAAATGTCTTATCCATTGGAAGTCATTTGAAGCAGAAAGAACAAGTGTATTTGATCGTCTTATACAGATGGTTGGTTCTCAAATTGAGAACCAGGACAATTATGAATGTATGGCCTATTGGCTTTCCAATACATCTACATTATTGTTCCTGCTCCAAAAGAGTTTAAAATCCAGTGCAGCACGGAAACCTCCTACTCCAACATCATTGTTTGGGAGGATGACCCAAGGTTTTCGCTCATCTTCTGCCAGTCTTTCAGTTGGTGCGCTTGATGTAATACGGTATGTTGAAGCCAAGTATCCAGCTTTACTTTTCAAGCAGCAGCTTACAGCTTATGTAGAGACAATATACGGAATAATTCGGGACAATATAAAGAAGGACTTGTCGCCACTGCTTTCTTCTTGTATTCAGGCACCCAAAACATTGAGAGGAAGTGCTATAAAATCACCTGGACAGTCAACTAGCAGTAGTCCTCGAGCTACTCCTTGGCACAGCATCATTGAGAGCCTTAACAAACTTCTTTCTACATTAAAAGAGAACTTTGTACCTACGGCACTAGTTCAGAAGATATTTACTCAGATTTTCTCATACATCAATGTACAGCTCTTTAACAGTCTTCTCCTGCGCCGAGAGTGCTGTACTTTCAGCAATGGCGAGTATGTGAAGTCTGGGTTAGCCGAGCTAGAACTTTGGTGTGGCCACACAACAAATGAGTATGCTGGCACATCCTGGGATGAGCTTAGGAATGTAAGGCAGGCAGTTGGATTCCTGGTTATACACCAGAAGTCTAGAATATCCTATGATGACATCACAAATGACCTCTGCCCTCTTTTGAGTGTACAACAGCTTCATAGAATATGCACACTTTACTGGGACGATAATTACAACACCCCAAGTGTTGATCCAGAGGTCATTTCCAGCATGAGACTTTTAATTTCAGAGGATTCCAATGACGACAGTAGTTCATTCCTGATGGAGGACAATTCCAGCATTCCTTTCTCAGTCGAGGATATTATTGGTTCTCTACGAGATAAGACTTTTACGGATGTACAACATCCTACCGAACTGCTCGAGGACCCCGCCTTCCAATTTTTAAAGGAATAA | 4503 | 41.62 | MAGNLNPVVGSHVWVEDPEVAWIDGEIVELDGEDITVKCTDANTIEAKASDVYPKDPEFPSCGVDDMTRLAYLHEPGVLQNLKSRYDINEIYTYTGNILIAVNPFRRLPHLYDHQIMEHYKGATFGELSPHPFAIADSAYRLMINEGVSQSILVSGESGAGKTESTKMLMRYLAYMGGRSGGKSATGERSVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDRNGRISGAAIRTYLLERSRVCQLSDPERNYHCFYMLCAAPPKDIERYKLGNPRTFHYLNQSNFYELDGLDESKEYLATRKAMEVVGMSSDEQDAIFRVVAAVLHLGNIEFVKGEEGDSSEPKDNKSRFHLKVVAELLMCDEKSLEDSLCKRVIVTRDEAIAKYLDPESAAVNRDALAKIVYSKLFDWIVNKINNSIGQDPDSKNLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYTKEEIDWSYIEFIDNQDVLDLIEKKPGGIIALLDEACMFPRSTHETFAEKLYQTFKDHKRFSKPKLSRSGFTISHYAGDVTYQTELFLDKNRDFVVPEHQALLRASNCPFVSSLFPPLPEESSKSTKFSSIGSQFKLQLQALLETLSVTEPHYIRCVKPNNLLKPGIFENSSVLQQLRCGGVMEAIRISCAGYPTRKTLDEFVGRFGILEPGVLNGRCDEVTACKSLMAKANLEGYQIGKTKVFLRAGQMADLDACRNVVLGRSAIIIQSKVRSYLGRKHFLLFRISAIQIQALCRGQVACEQYEHLRREAASIQIQKHCRMYLARSGFQKLCSSAVYLQSGFRGMDARKVFKFRRQMRAAIIIQSHSREHLARLHYLRLRKSVITLQCAWRAKMARRELRNLKMAAKETGALQAAKTKLEKEVEELTWRLQLEKRMRADLEEARTLESTKLQSALEEMQIQFQETKELLNKEREAAKRAAEQVPVIQEVQVVDQEMVNKLSAENEHLKALVDSLEKRIDETERKFEETNKLSEERLKQATDAESKIIELKTNMQRMEEKLTDMETEDQILRQQALRNSSSRKMSDHLGIPTTQPLENGHGPLRTTSTKKFGTEADMNLRRSQIERQNKSVDALMNCVTQDVGFSQGKPVAAFTIYKCLIHWKSFEAERTSVFDRLIQMVGSQIENQDNYECMAYWLSNTSTLLFLLQKSLKSSAARKPPTPTSLFGRMTQGFRSSSASLSVGALDVIRYVEAKYPALLFKQQLTAYVETIYGIIRDNIKKDLSPLLSSCIQAPKTLRGSAIKSPGQSTSSSPRATPWHSIIESLNKLLSTLKENFVPTALVQKIFTQIFSYINVQLFNSLLLRRECCTFSNGEYVKSGLAELELWCGHTTNEYAGTSWDELRNVRQAVGFLVIHQKSRISYDDITNDLCPLLSVQQLHRICTLYWDDNYNTPSVDPEVISSMRLLISEDSNDDSSSFLMEDNSSIPFSVEDIIGSLRDKTFTDVQHPTELLEDPAFQFLKE | 1500 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 4 | 1705561 | 1718346 | + | Conep04aG0038900.1 | Cone4ag0376 | 435354 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cone4ag0376 | 1500 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 790 | 887 | IPR027417 | - | |
| Cone4ag0376 | 1500 | Gene3D | - | 443 | 627 | - | - | |
| Cone4ag0376 | 1500 | ProSiteProfiles | IQ motif profile. | 812 | 839 | - | - | |
| Cone4ag0376 | 1500 | PRINTS | Myosin heavy chain signature | 92 | 111 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Cone4ag0376 | 1500 | PRINTS | Myosin heavy chain signature | 433 | 461 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Cone4ag0376 | 1500 | PRINTS | Myosin heavy chain signature | 200 | 227 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Cone4ag0376 | 1500 | PRINTS | Myosin heavy chain signature | 149 | 174 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Cone4ag0376 | 1500 | PRINTS | Myosin heavy chain signature | 486 | 514 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Cone4ag0376 | 1500 | SMART | MYSc_2a | 56 | 737 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Cone4ag0376 | 1500 | FunFam | unconventional myosin-Va | 838 | 885 | - | - | |
| Cone4ag0376 | 1500 | ProSiteProfiles | IQ motif profile. | 858 | 887 | - | - | |
| Cone4ag0376 | 1500 | SMART | DIL_2 | 1322 | 1429 | IPR002710 | - | |
| Cone4ag0376 | 1500 | CDD | MYSc_Myo11 | 76 | 724 | IPR036018 | - | |
| Cone4ag0376 | 1500 | Coils | Coil | 895 | 922 | - | - | |
| Cone4ag0376 | 1500 | Gene3D | - | 256 | 314 | - | - | |
| Cone4ag0376 | 1500 | FunFam | Myosin heavy chain | 256 | 311 | - | - | |
| Cone4ag0376 | 1500 | Pfam | Myosin N-terminal SH3-like domain | 9 | 52 | IPR004009 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Cone4ag0376 | 1500 | ProSiteProfiles | Myosin motor domain profile. | 62 | 736 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Cone4ag0376 | 1500 | Coils | Coil | 934 | 961 | - | - | |
| Cone4ag0376 | 1500 | Gene3D | Kinesin motor domain | 65 | 666 | IPR036961 | - | |
| Cone4ag0376 | 1500 | Pfam | IQ calmodulin-binding motif | 837 | 855 | IPR000048 | GO:0005515(InterPro) | |
| Cone4ag0376 | 1500 | Pfam | IQ calmodulin-binding motif | 813 | 831 | IPR000048 | GO:0005515(InterPro) | |
| Cone4ag0376 | 1500 | Pfam | IQ calmodulin-binding motif | 859 | 879 | IPR000048 | GO:0005515(InterPro) | |
| Cone4ag0376 | 1500 | Pfam | IQ calmodulin-binding motif | 741 | 759 | IPR000048 | GO:0005515(InterPro) | |
| Cone4ag0376 | 1500 | Pfam | IQ calmodulin-binding motif | 789 | 807 | IPR000048 | GO:0005515(InterPro) | |
| Cone4ag0376 | 1500 | Pfam | DIL domain | 1322 | 1427 | IPR002710 | - | |
| Cone4ag0376 | 1500 | Pfam | Myosin head (motor domain) | 64 | 724 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Cone4ag0376 | 1500 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 34 | 793 | IPR027417 | - | |
| Cone4ag0376 | 1500 | Gene3D | - | 790 | 836 | - | - | |
| Cone4ag0376 | 1500 | Gene3D | - | 739 | 789 | - | - | |
| Cone4ag0376 | 1500 | Gene3D | - | 837 | 886 | - | - | |
| Cone4ag0376 | 1500 | ProSiteProfiles | Myosin N-terminal SH3-like domain profile. | 8 | 57 | IPR004009 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Cone4ag0376 | 1500 | Coils | Coil | 976 | 1010 | - | - | |
| Cone4ag0376 | 1500 | Gene3D | - | 11 | 55 | IPR008989 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0051015(InterPro) | |
| Cone4ag0376 | 1500 | FunFam | unconventional myosin-Va | 789 | 837 | - | - | |
| Cone4ag0376 | 1500 | ProSiteProfiles | IQ motif profile. | 835 | 864 | - | - | |
| Cone4ag0376 | 1500 | ProSiteProfiles | IQ motif profile. | 763 | 791 | - | - | |
| Cone4ag0376 | 1500 | ProSiteProfiles | IQ motif profile. | 787 | 813 | - | - | |
| Cone4ag0376 | 1500 | PANTHER | MYOSIN | 835 | 1444 | - | GO:0000146(PANTHER)|GO:0005737(PANTHER)|GO:0007015(PANTHER)|GO:0015629(PANTHER)|GO:0030050(PANTHER)|GO:0031982(PANTHER)|GO:0051015(PANTHER) | |
| Cone4ag0376 | 1500 | Gene3D | - | 670 | 738 | - | - | |
| Cone4ag0376 | 1500 | SMART | iq_5 | 786 | 808 | IPR000048 | GO:0005515(InterPro) | |
| Cone4ag0376 | 1500 | SMART | iq_5 | 738 | 760 | IPR000048 | GO:0005515(InterPro) | |
| Cone4ag0376 | 1500 | SMART | iq_5 | 834 | 856 | IPR000048 | GO:0005515(InterPro) | |
| Cone4ag0376 | 1500 | SMART | iq_5 | 761 | 783 | IPR000048 | GO:0005515(InterPro) | |
| Cone4ag0376 | 1500 | SMART | iq_5 | 809 | 831 | IPR000048 | GO:0005515(InterPro) | |
| Cone4ag0376 | 1500 | SMART | iq_5 | 857 | 879 | IPR000048 | GO:0005515(InterPro) | |
| Cone4ag0376 | 1500 | CDD | MyosinXI_CBD | 1103 | 1469 | IPR037975 | GO:0007015(InterPro) | |
| Cone4ag0376 | 1500 | Coils | Coil | 1018 | 1052 | - | - | |
| Cone4ag0376 | 1500 | Gene3D | Myosin VI head, motor domain, U50 subdomain | 316 | 605 | - | - | |
| Cone4ag0376 | 1500 | ProSiteProfiles | Dilute domain profile. | 1152 | 1447 | IPR002710 | - | |
| Cone4ag0376 | 1500 | FunFam | Class V myosin | 443 | 584 | - | - | |
| Cone4ag0376 | 1500 | FunFam | Myosin 2 | 316 | 432 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cone17ag0652 | Cone-Chr17:3882343 | Cone4ag0376 | Cone-Chr4:1705561 | 0 | dispersed | |
| Cone4ag0376 | Cone-Chr4:1705561 | Cone4ag0805 | Cone-Chr4:5072247 | 0 | dispersed | |
| Cone4ag0376 | Cone-Chr4:1705561 | Cone20ag0845 | Cone-Chr20:6138631 | 0 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cone4ag0376 | K10357 | - | csv:101221506 | 2301.94 |