Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone4ag0397 ATGGGCGATGATGGGAAAGTCTACACCTTGGCGGAAGTAGCTGAGCACAAGACAGCTAGTGATTGTTGGCTAATCATCGACGGCAAGGTTTATGATGTGACAAAATTCTTAGAAGACCATCCGGGGGGCGACGAGGTTTTGGTGTCAGCTACAGGGAAGGATGCAACGGATGATTTTGAAGATGTGGGTCACAGTACGAGCGCAAAAGAAATGATGAAAGAATTCTATCTGGGAGAGATTAATTCCTCCACGGTCCCCAAAAAGGTGGTATATACCCCTCCGAACCAACCTCATTACAATCAGGACAAGACATCTGAGTTCATCATCAAAATCCTCCAGTTCCTAGTTCCGCTGGCCATCCTGGGTTTGGCTGTCGGAATCCGTATCTACACCAAATCATGA 402 47.01 MGDDGKVYTLAEVAEHKTASDCWLIIDGKVYDVTKFLEDHPGGDEVLVSATGKDATDDFEDVGHSTSAKEMMKEFYLGEINSSTVPKKVVYTPPNQPHYNQDKTSEFIIKILQFLVPLAILGLAVGIRIYTKS 133
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 1806930 1808903 - Conep04aG0041100.1 Cone4ag0397 435375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone4ag0397 133 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 36 43 IPR018506 GO:0020037(InterPro)
Cone4ag0397 133 Gene3D - 2 86 IPR036400 -
Cone4ag0397 133 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 5 88 IPR036400 -
Cone4ag0397 133 SMART Cyt_b5_2 8 81 IPR001199 -
Cone4ag0397 133 PRINTS Cytochrome B5 signature 40 54 IPR001199 -
Cone4ag0397 133 PRINTS Cytochrome B5 signature 68 80 IPR001199 -
Cone4ag0397 133 PRINTS Cytochrome B5 signature 30 40 IPR001199 -
Cone4ag0397 133 PRINTS Cytochrome B5 signature 55 62 IPR001199 -
Cone4ag0397 133 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 5 81 IPR001199 -
Cone4ag0397 133 Pfam Cytochrome b5-like Heme/Steroid binding domain 9 80 IPR001199 -
Cone4ag0397 133 PANTHER CYTOCHROME B5 5 125 IPR050668 GO:0016020(PANTHER)|GO:0020037(PANTHER)|GO:0043231(PANTHER)
Cone4ag0397 133 FunFam Cytochrome b5 type B 2 85 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone18ag0994 Cone-Chr18:7305465 Cone4ag0397 Cone-Chr4:1806930 5.07E-45 dispersed
Cone1ag1008 Cone-Chr1:55070293 Cone4ag0397 Cone-Chr4:1806930 2.62E-57 dispersed
Cone4ag0397 Cone-Chr4:1806930 Cone5ag0716 Cone-Chr5:3082824 4.20E-44 dispersed
Cone11ag0782 Cone-Chr11:6032601 Cone4ag0397 Cone-Chr4:1806930 5.07E-40 transposed
Cone4ag0958 Cone-Chr4:8200659 Cone4ag0397 Cone-Chr4:1806930 4.32E-19 transposed
Cone4ag0397 Cone-Chr4:1806930 Cone7ag0386 Cone-Chr7:1704037 4.46E-91 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone4ag0397 K23490 - ath:AT2G32720 229.95