Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cone4ag0461 ATGGAGTCATTTGTAGAGCTCGTGTGGTCGAGTTGGTCTGTTTCTGTATGCTTATTGGGTGGTGGTATCTTGGCCCTAATAATGAGTTGGGCCCTTAAGAATACCAATCGATGGATTTATGAAACCCCTTTGGATCATGATGTGAAGTGGTCTCTTCCTCCTGGTGATTTGGGCTGGCCCTTCATCGGCAACATGTGGGCCTTCCTCCGAGCCTTCAAGACCCACGACCCCGATTCCTTCATCTCCAACTACGTCACCAGATATGGACGTACTGGTATCTACAAAGCATTCATGTTTGGAAACCCAAGTGTGATCGTGACAACACCAGAAGGATGCAAGAAAATCTTAACTGACGATGAATCATTCAAACCGGGTTGGCCTCAATCCACAATCAAACTAATCGGGGAAAAATCGTTCATAGCTATTTCTCAAGACGAACATAGGCGTCTTAGGCGATTAACGGCCGCTCCGATCAACGGTCATGAAGCCCTGACCACTTACATTAAGTACATTGAAGAAATTGTGATATCTTCAGTTGAGAAATGGTCCAAGATGGGAGATATTGAGTTGCTTACTCAATTGAGGAAGGTCACTTTCAGGATAATTATGTACATTTTTCTTACCTCAGAGAGTGAGATTGTCATGGCGGCTTTGGAGAAGGAGTACACTGCCCTTAATTATGGTGTAAGAGCTATGGCTATCAACATTCCTGGATTTGCTTATCATAAAGCACTCAAGGCAAGGAGAAATTTGGTGGCTGCATTTCAGATAATAGTGGATCGGAGAAGAAGAGAAAGGGAGGAGAAGTTGACGCGGACAAAGAAGGACATGATGGATGCTTTGCTGGAAGTAGAAGATGAAAATGGCAGAAAATTGAGCGATGAGGAAATTATTGATGTTCTGTTGATGTACTTAAATGCAGGCCATGAATCTTCTGGTCATACTATGATGTGGGCACTCGTTTTCTTACAGCAAAATCCACAATTTCTCCAAAAAGCTAAGGAAGAGCAAGAGGCTATCATTAAGGAGAGGTCTGCAAATCAGAAGGGTTTGACATTCCAGGAATTTCGACAAATGGAATATCTTTCAAAGGTGATCGATGAAACTCTTCGAATTGTAACATTCTCACTTGTCAATTTCCGGGAGGCGAGAACCGACGTCAAAATAAATGGCTACACAATACCCAAAGGCTGGAAAGCTCTGGTTTGGTTTAGAAGTGTGCACTTGGATCCTGAAATTTTTCCAAACCCTAAGGTGTTTGATCCTTCCAGATGGGATGATTATACAGCAAAAGCAGGCTCATTTCTACCCTTTGGAGCAGGAAGCAGGTTGTGTCCAGGAAATGATCTGGCCAAGTTGGAAATCTCTATTTTTCTCCACCATTTTCTTCTTAACTATCAGTTGGAAAGGCTAAATCCGGGAGCTCGAATCGGTTACTTACCCCATCCGAGGCCGAAAGATAATTGTGTGGCAAGGATTAAGAAGATTAATCCCTAA 1497 43.02 MESFVELVWSSWSVSVCLLGGGILALIMSWALKNTNRWIYETPLDHDVKWSLPPGDLGWPFIGNMWAFLRAFKTHDPDSFISNYVTRYGRTGIYKAFMFGNPSVIVTTPEGCKKILTDDESFKPGWPQSTIKLIGEKSFIAISQDEHRRLRRLTAAPINGHEALTTYIKYIEEIVISSVEKWSKMGDIELLTQLRKVTFRIIMYIFLTSESEIVMAALEKEYTALNYGVRAMAINIPGFAYHKALKARRNLVAAFQIIVDRRRREREEKLTRTKKDMMDALLEVEDENGRKLSDEEIIDVLLMYLNAGHESSGHTMMWALVFLQQNPQFLQKAKEEQEAIIKERSANQKGLTFQEFRQMEYLSKVIDETLRIVTFSLVNFREARTDVKINGYTIPKGWKALVWFRSVHLDPEIFPNPKVFDPSRWDDYTAKAGSFLPFGAGSRLCPGNDLAKLEISIFLHHFLLNYQLERLNPGARIGYLPHPRPKDNCVARIKKINP 498
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
4 2046340 2048925 + Conep04aG0047500.1 Cone4ag0461 435439
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cone4ag0461 498 Coils Coil 267 287 - -
Cone4ag0461 498 Gene3D Cytochrome P450 45 497 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone4ag0461 498 PRINTS P450 superfamily signature 364 375 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone4ag0461 498 PRINTS P450 superfamily signature 307 324 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone4ag0461 498 PRINTS P450 superfamily signature 436 445 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone4ag0461 498 PRINTS P450 superfamily signature 445 456 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone4ag0461 498 Pfam Cytochrome P450 53 469 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone4ag0461 498 CDD CYP90-like 87 495 - -
Cone4ag0461 498 FunFam Ent-kaurenoic acid oxidase 44 496 - -
Cone4ag0461 498 SUPERFAMILY Cytochrome P450 49 494 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone4ag0461 498 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 438 447 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Cone4ag0461 498 PRINTS E-class P450 group I signature 445 468 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone4ag0461 498 PRINTS E-class P450 group I signature 316 342 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone4ag0461 498 PRINTS E-class P450 group I signature 435 445 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone4ag0461 498 PRINTS E-class P450 group I signature 403 427 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone4ag0461 498 PANTHER CYTOCHROME P450 26 51 471 - GO:0004497(PANTHER)|GO:0005783(PANTHER)|GO:0016125(PANTHER)|GO:0016491(PANTHER)|GO:0051777(PANTHER)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone4ag0461 Cone-Chr4:2046340 Cone7ag1082 Cone-Chr7:8217629 2.16E-71 dispersed
Cone12ag0599 Cone-Chr12:5311371 Cone4ag0461 Cone-Chr4:2046340 1.32E-169 transposed
Cone3ag1053 Cone-Chr3:29266540 Cone4ag0461 Cone-Chr4:2046340 1.29E-97 transposed
Cone14ag0278 Cone-Chr14:1274806 Cone4ag0461 Cone-Chr4:2046340 1.68E-264 wgd
Cone15ag0298 Cone-Chr15:1388286 Cone4ag0461 Cone-Chr4:2046340 1.18E-223 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone4ag0461 K04123 - cit:102629702 725.317