Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cone4ag0461 | ATGGAGTCATTTGTAGAGCTCGTGTGGTCGAGTTGGTCTGTTTCTGTATGCTTATTGGGTGGTGGTATCTTGGCCCTAATAATGAGTTGGGCCCTTAAGAATACCAATCGATGGATTTATGAAACCCCTTTGGATCATGATGTGAAGTGGTCTCTTCCTCCTGGTGATTTGGGCTGGCCCTTCATCGGCAACATGTGGGCCTTCCTCCGAGCCTTCAAGACCCACGACCCCGATTCCTTCATCTCCAACTACGTCACCAGATATGGACGTACTGGTATCTACAAAGCATTCATGTTTGGAAACCCAAGTGTGATCGTGACAACACCAGAAGGATGCAAGAAAATCTTAACTGACGATGAATCATTCAAACCGGGTTGGCCTCAATCCACAATCAAACTAATCGGGGAAAAATCGTTCATAGCTATTTCTCAAGACGAACATAGGCGTCTTAGGCGATTAACGGCCGCTCCGATCAACGGTCATGAAGCCCTGACCACTTACATTAAGTACATTGAAGAAATTGTGATATCTTCAGTTGAGAAATGGTCCAAGATGGGAGATATTGAGTTGCTTACTCAATTGAGGAAGGTCACTTTCAGGATAATTATGTACATTTTTCTTACCTCAGAGAGTGAGATTGTCATGGCGGCTTTGGAGAAGGAGTACACTGCCCTTAATTATGGTGTAAGAGCTATGGCTATCAACATTCCTGGATTTGCTTATCATAAAGCACTCAAGGCAAGGAGAAATTTGGTGGCTGCATTTCAGATAATAGTGGATCGGAGAAGAAGAGAAAGGGAGGAGAAGTTGACGCGGACAAAGAAGGACATGATGGATGCTTTGCTGGAAGTAGAAGATGAAAATGGCAGAAAATTGAGCGATGAGGAAATTATTGATGTTCTGTTGATGTACTTAAATGCAGGCCATGAATCTTCTGGTCATACTATGATGTGGGCACTCGTTTTCTTACAGCAAAATCCACAATTTCTCCAAAAAGCTAAGGAAGAGCAAGAGGCTATCATTAAGGAGAGGTCTGCAAATCAGAAGGGTTTGACATTCCAGGAATTTCGACAAATGGAATATCTTTCAAAGGTGATCGATGAAACTCTTCGAATTGTAACATTCTCACTTGTCAATTTCCGGGAGGCGAGAACCGACGTCAAAATAAATGGCTACACAATACCCAAAGGCTGGAAAGCTCTGGTTTGGTTTAGAAGTGTGCACTTGGATCCTGAAATTTTTCCAAACCCTAAGGTGTTTGATCCTTCCAGATGGGATGATTATACAGCAAAAGCAGGCTCATTTCTACCCTTTGGAGCAGGAAGCAGGTTGTGTCCAGGAAATGATCTGGCCAAGTTGGAAATCTCTATTTTTCTCCACCATTTTCTTCTTAACTATCAGTTGGAAAGGCTAAATCCGGGAGCTCGAATCGGTTACTTACCCCATCCGAGGCCGAAAGATAATTGTGTGGCAAGGATTAAGAAGATTAATCCCTAA | 1497 | 43.02 | MESFVELVWSSWSVSVCLLGGGILALIMSWALKNTNRWIYETPLDHDVKWSLPPGDLGWPFIGNMWAFLRAFKTHDPDSFISNYVTRYGRTGIYKAFMFGNPSVIVTTPEGCKKILTDDESFKPGWPQSTIKLIGEKSFIAISQDEHRRLRRLTAAPINGHEALTTYIKYIEEIVISSVEKWSKMGDIELLTQLRKVTFRIIMYIFLTSESEIVMAALEKEYTALNYGVRAMAINIPGFAYHKALKARRNLVAAFQIIVDRRRREREEKLTRTKKDMMDALLEVEDENGRKLSDEEIIDVLLMYLNAGHESSGHTMMWALVFLQQNPQFLQKAKEEQEAIIKERSANQKGLTFQEFRQMEYLSKVIDETLRIVTFSLVNFREARTDVKINGYTIPKGWKALVWFRSVHLDPEIFPNPKVFDPSRWDDYTAKAGSFLPFGAGSRLCPGNDLAKLEISIFLHHFLLNYQLERLNPGARIGYLPHPRPKDNCVARIKKINP | 498 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 4 | 2046340 | 2048925 | + | Conep04aG0047500.1 | Cone4ag0461 | 435439 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cone4ag0461 | 498 | Coils | Coil | 267 | 287 | - | - | |
| Cone4ag0461 | 498 | Gene3D | Cytochrome P450 | 45 | 497 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone4ag0461 | 498 | PRINTS | P450 superfamily signature | 364 | 375 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone4ag0461 | 498 | PRINTS | P450 superfamily signature | 307 | 324 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone4ag0461 | 498 | PRINTS | P450 superfamily signature | 436 | 445 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone4ag0461 | 498 | PRINTS | P450 superfamily signature | 445 | 456 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone4ag0461 | 498 | Pfam | Cytochrome P450 | 53 | 469 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone4ag0461 | 498 | CDD | CYP90-like | 87 | 495 | - | - | |
| Cone4ag0461 | 498 | FunFam | Ent-kaurenoic acid oxidase | 44 | 496 | - | - | |
| Cone4ag0461 | 498 | SUPERFAMILY | Cytochrome P450 | 49 | 494 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone4ag0461 | 498 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 438 | 447 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Cone4ag0461 | 498 | PRINTS | E-class P450 group I signature | 445 | 468 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone4ag0461 | 498 | PRINTS | E-class P450 group I signature | 316 | 342 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone4ag0461 | 498 | PRINTS | E-class P450 group I signature | 435 | 445 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone4ag0461 | 498 | PRINTS | E-class P450 group I signature | 403 | 427 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone4ag0461 | 498 | PANTHER | CYTOCHROME P450 26 | 51 | 471 | - | GO:0004497(PANTHER)|GO:0005783(PANTHER)|GO:0016125(PANTHER)|GO:0016491(PANTHER)|GO:0051777(PANTHER) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cone4ag0461 | Cone-Chr4:2046340 | Cone7ag1082 | Cone-Chr7:8217629 | 2.16E-71 | dispersed | |
| Cone12ag0599 | Cone-Chr12:5311371 | Cone4ag0461 | Cone-Chr4:2046340 | 1.32E-169 | transposed | |
| Cone3ag1053 | Cone-Chr3:29266540 | Cone4ag0461 | Cone-Chr4:2046340 | 1.29E-97 | transposed | |
| Cone14ag0278 | Cone-Chr14:1274806 | Cone4ag0461 | Cone-Chr4:2046340 | 1.68E-264 | wgd | |
| Cone15ag0298 | Cone-Chr15:1388286 | Cone4ag0461 | Cone-Chr4:2046340 | 1.18E-223 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cone4ag0461 | K04123 | - | cit:102629702 | 725.317 |