Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cone4ag0517 | ATGGAGGTTCAGAGAACAGGAATCTCAGGTGGCCGCCGGCTGCAGTCAATGGTGGCGCTGGCGGTGGTGCACTGTATCAGGGCAGCTATGCTGCCGGAAGTGTCAGCTACGCGGTGGACTGTGGGAGGTAACATGGGATGGACTAGTAATGTTAACTACACCATTTGGGCTCAAGATAAGCATTTCTACAATGGCGACTGGTTTTTTTTCGTGTACGATAGGAACCAAATGAATGTTCTGGAGGTGAACAAGACAGATTATGAGTCATGTAACTCGGACCACCCTCTCCACAACTGGACCACTGGGGCCGGAAGGGACGTGGTCCCACTGAATGTGACTAGACACTACTACTTCATAAGTGGCAGGGGCTTCTGCTATGGCGGCATGAAGCTGGCCGTCTCGGTTGAAAACCCACCTCCACCTCCCTTTGCTTCTCATGTAAAAGACAGTCCTATGAGGTCGGTCGAAAACCCATCTCCATCTCCCTCTCCCTCTCCTGTAAAAGACAGTGCTATGAGGTCGGTTGAAAACCCATCTCCACCTCCCTCTGCTTCTCCTGGAAAAGGCAGTGCTATGAGGTTAACTTCTGGTTGTCATGTTGTTTTGCCTTTGGTTTTTGCCACTGGTGCTATTTGGGATGCATTCGTTCGATACTGA | 657 | 50.68 | MEVQRTGISGGRRLQSMVALAVVHCIRAAMLPEVSATRWTVGGNMGWTSNVNYTIWAQDKHFYNGDWFFFVYDRNQMNVLEVNKTDYESCNSDHPLHNWTTGAGRDVVPLNVTRHYYFISGRGFCYGGMKLAVSVENPPPPPFASHVKDSPMRSVENPSPSPSPSPVKDSAMRSVENPSPPPSASPGKGSAMRLTSGCHVVLPLVFATGAIWDAFVRY | 218 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 4 | 2314218 | 2315373 | + | Conep04aG0053500.1 | Cone4ag0517 | 435495 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cone4ag0517 | 218 | Gene3D | - | 35 | 138 | IPR008972 | - | |
| Cone4ag0517 | 218 | MobiDBLite | consensus disorder prediction | 142 | 190 | - | - | |
| Cone4ag0517 | 218 | PANTHER | BLUE COPPER PROTEIN | 25 | 151 | IPR039391 | GO:0009055(InterPro)|GO:0046658(PANTHER) | |
| Cone4ag0517 | 218 | FunFam | Lamin-like protein | 35 | 138 | - | - | |
| Cone4ag0517 | 218 | Pfam | Plastocyanin-like domain | 47 | 129 | IPR003245 | GO:0009055(InterPro) | |
| Cone4ag0517 | 218 | SUPERFAMILY | Cupredoxins | 36 | 135 | IPR008972 | - | |
| Cone4ag0517 | 218 | ProSiteProfiles | Phytocyanin domain profile. | 37 | 137 | IPR003245 | GO:0009055(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cone11ag0947 | Cone-Chr11:7723267 | Cone4ag0517 | Cone-Chr4:2314218 | 3.83E-29 | dispersed | |
| Cone3ag1360 | Cone-Chr3:32598252 | Cone4ag0517 | Cone-Chr4:2314218 | 2.34E-14 | dispersed | |
| Cone4ag0517 | Cone-Chr4:2314218 | Cone7ag0492 | Cone-Chr7:2266053 | 1.87E-102 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cone4ag0517 | - | - | - | 0.0 |