Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cone4ag0517 ATGGAGGTTCAGAGAACAGGAATCTCAGGTGGCCGCCGGCTGCAGTCAATGGTGGCGCTGGCGGTGGTGCACTGTATCAGGGCAGCTATGCTGCCGGAAGTGTCAGCTACGCGGTGGACTGTGGGAGGTAACATGGGATGGACTAGTAATGTTAACTACACCATTTGGGCTCAAGATAAGCATTTCTACAATGGCGACTGGTTTTTTTTCGTGTACGATAGGAACCAAATGAATGTTCTGGAGGTGAACAAGACAGATTATGAGTCATGTAACTCGGACCACCCTCTCCACAACTGGACCACTGGGGCCGGAAGGGACGTGGTCCCACTGAATGTGACTAGACACTACTACTTCATAAGTGGCAGGGGCTTCTGCTATGGCGGCATGAAGCTGGCCGTCTCGGTTGAAAACCCACCTCCACCTCCCTTTGCTTCTCATGTAAAAGACAGTCCTATGAGGTCGGTCGAAAACCCATCTCCATCTCCCTCTCCCTCTCCTGTAAAAGACAGTGCTATGAGGTCGGTTGAAAACCCATCTCCACCTCCCTCTGCTTCTCCTGGAAAAGGCAGTGCTATGAGGTTAACTTCTGGTTGTCATGTTGTTTTGCCTTTGGTTTTTGCCACTGGTGCTATTTGGGATGCATTCGTTCGATACTGA 657 50.68 MEVQRTGISGGRRLQSMVALAVVHCIRAAMLPEVSATRWTVGGNMGWTSNVNYTIWAQDKHFYNGDWFFFVYDRNQMNVLEVNKTDYESCNSDHPLHNWTTGAGRDVVPLNVTRHYYFISGRGFCYGGMKLAVSVENPPPPPFASHVKDSPMRSVENPSPSPSPSPVKDSAMRSVENPSPPPSASPGKGSAMRLTSGCHVVLPLVFATGAIWDAFVRY 218
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
4 2314218 2315373 + Conep04aG0053500.1 Cone4ag0517 435495
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cone4ag0517 218 Gene3D - 35 138 IPR008972 -
Cone4ag0517 218 MobiDBLite consensus disorder prediction 142 190 - -
Cone4ag0517 218 PANTHER BLUE COPPER PROTEIN 25 151 IPR039391 GO:0009055(InterPro)|GO:0046658(PANTHER)
Cone4ag0517 218 FunFam Lamin-like protein 35 138 - -
Cone4ag0517 218 Pfam Plastocyanin-like domain 47 129 IPR003245 GO:0009055(InterPro)
Cone4ag0517 218 SUPERFAMILY Cupredoxins 36 135 IPR008972 -
Cone4ag0517 218 ProSiteProfiles Phytocyanin domain profile. 37 137 IPR003245 GO:0009055(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone11ag0947 Cone-Chr11:7723267 Cone4ag0517 Cone-Chr4:2314218 3.83E-29 dispersed
Cone3ag1360 Cone-Chr3:32598252 Cone4ag0517 Cone-Chr4:2314218 2.34E-14 dispersed
Cone4ag0517 Cone-Chr4:2314218 Cone7ag0492 Cone-Chr7:2266053 1.87E-102 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone4ag0517 - - - 0.0