Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone4ag0585 ATGGCTCGAGAAAAAGCGATAGGCATAGATTTAGGCACCACCTACAGCTGCTTGGGCACGTGGCAGAACGACCGCGTTGAGATCATCCCGAACGACCAAGGCAACCGGACAACCCCATCCTACGTGGCATTCACCGACACGGAACGATCGATCGGCGATGCAGCGAAGAACCTGGTTGCGATGAACCCTGAGAACACTGTCTTCGACGCGAAACGGTTTATCGGGAGAAGATTCTCCGACCCGTCGGTTCAGAGCGATATGAAGCTCTGGCCCTTTAAGGTAATTCCTGGGCCTGGTGATAAGCCGCCCATGATCATCGTTCGTTATAAAGGAGAGGAGAAGCGGTTCTCGCCTGAAGAGATTTCTTCCATGGTGTTGACTAAGATGAGGGAGATTGCTGAAGCTTTTCTGGGTCAGACCATAAAAAACGCCGTCATCACGGTCCCTGCTTATTTCAATGATTCTCAGAGGCAAGCTACTAAAGATGCAGGTTCTATTGCAGGGCTGAACGTGATTAGAATGATCAACGAACCAACAGCCGCCGCTATAGCGTACGGATTAGACAAAAAAAACTCAAGAAAAGGAGAACAGAACGTGCTTATATTCGATCTAGGTGGAGGCACTTTCGACGTTTCACTCCTAACATTCGAAGAAGGAATCTTCGAAGTCAAAGCCACGGCGGGAGACGCCCATTTGGGCGGAGAAGACTTTGACAATCGCAAGGTCAACCATTTCGTGGCAGAATTCAAACGGAAACACAAAAAAGACATAAGCGGGAACGCTAGATACTTGCGGCGGTTGAGAACGGCTTGCGAAAGAGCAAAGCGGAGCCAAGTCTACGAGGTGGTCTTAGTCGGCGGGTCGACCCGTGTCCCGAAAATCCAGCATCTTCTTCAAGACTTTTTCAATGGGAAGGACCTTTGTAAGAGCTTAAACCCGGACGAAGCCGTGGCTTATGGAGCAGCAGTTCAGGCTGCGATCCTAACTGGAGAAGGGGACCAGAAAGTACAGGACTTGTTGTTACTTGATGTAGCCCCGTTGAGTCTAGGGCTTGAAACGGCCGGTGGGGTCATGACGGTTTTGATTCCGAGGAACACTACGATTCCAACGAAGAAAGAGCAATTTGAATTGACTGGAATACCTCCAGCCCCGCGTGGGGTCCCGCAGGTTAATGTGACGTTTGACATTGACGCAAATGGAATATTGAATGTGTCGGCGGAGGATAAGACGGCCGGAGTGAAGAATAAGATAACGATAACGAACGATAAGGGGGTTTGA 1278 49.92 MAREKAIGIDLGTTYSCLGTWQNDRVEIIPNDQGNRTTPSYVAFTDTERSIGDAAKNLVAMNPENTVFDAKRFIGRRFSDPSVQSDMKLWPFKVIPGPGDKPPMIIVRYKGEEKRFSPEEISSMVLTKMREIAEAFLGQTIKNAVITVPAYFNDSQRQATKDAGSIAGLNVIRMINEPTAAAIAYGLDKKNSRKGEQNVLIFDLGGGTFDVSLLTFEEGIFEVKATAGDAHLGGEDFDNRKVNHFVAEFKRKHKKDISGNARYLRRLRTACERAKRSQVYEVVLVGGSTRVPKIQHLLQDFFNGKDLCKSLNPDEAVAYGAAVQAAILTGEGDQKVQDLLLLDVAPLSLGLETAGGVMTVLIPRNTTIPTKKEQFELTGIPPAPRGVPQVNVTFDIDANGILNVSAEDKTAGVKNKITITNDKGV 425
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 2689220 2690977 - Conep04aG0060500.1 Cone4ag0585 435563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone4ag0585 425 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 375 425 IPR029047 -
Cone4ag0585 425 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 326 374 IPR029047 -
Cone4ag0585 425 PRINTS 70kDa heat shock protein signature 279 295 - -
Cone4ag0585 425 PRINTS 70kDa heat shock protein signature 311 331 - -
Cone4ag0585 425 PRINTS 70kDa heat shock protein signature 33 45 - -
Cone4ag0585 425 PRINTS 70kDa heat shock protein signature 55 63 - -
Cone4ag0585 425 PRINTS 70kDa heat shock protein signature 338 357 - -
Cone4ag0585 425 PRINTS 70kDa heat shock protein signature 5 18 - -
Cone4ag0585 425 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 335 424 IPR029047 -
Cone4ag0585 425 SUPERFAMILY Actin-like ATPase domain 5 189 IPR043129 -
Cone4ag0585 425 Gene3D Actin; Chain A, domain 4 233 276 - -
Cone4ag0585 425 Gene3D - 312 325 - -
Cone4ag0585 425 Gene3D - 190 232 - -
Cone4ag0585 425 PANTHER HEAT SHOCK PROTEIN 70KDA 6 277 IPR013126 GO:0005524(InterPro)|GO:0005737(PANTHER)|GO:0140662(InterPro)
Cone4ag0585 425 FunFam Molecular chaperone DnaK 234 282 - -
Cone4ag0585 425 FunFam heat shock 70 kDa protein-like 68 124 - -
Cone4ag0585 425 Pfam Hsp70 protein 374 424 IPR013126 GO:0005524(InterPro)|GO:0140662(InterPro)
Cone4ag0585 425 Pfam Hsp70 protein 6 276 IPR013126 GO:0005524(InterPro)|GO:0140662(InterPro)
Cone4ag0585 425 Gene3D - 277 311 - -
Cone4ag0585 425 Gene3D - 68 124 - -
Cone4ag0585 425 FunFam Heat shock protein 70 7 198 - -
Cone4ag0585 425 ProSitePatterns Heat shock hsp70 proteins family signature 1. 9 16 IPR018181 -
Cone4ag0585 425 ProSitePatterns Heat shock hsp70 proteins family signature 2. 201 214 IPR018181 -
Cone4ag0585 425 Gene3D - 7 189 - -
Cone4ag0585 425 SUPERFAMILY Actin-like ATPase domain 194 330 IPR043129 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone4ag0585 Cone-Chr4:2689220 Cone5ag1163 Cone-Chr5:5226230 5.34E-244 dispersed
Cone4ag0585 Cone-Chr4:2689220 Cone7ag0556 Cone-Chr7:2675379 5.23E-263 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone4ag0585 K03283 - mdm:103434172 665.996