Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone4ag0600 | ATGTCGGACGAAGAGCACCACTTCGAATCTAAAGCCGACGCCGGAGCGTCCAAGACTTATCCTCAACAAGCTGGAACCATCCGTAAAAATGGCTATATCGTCATTAAGAATCGACCTTGCAAGGTTGTGGAAGTTTCAACTTCAAAAACCGGCAAGCATGGACACGCAAAGTGTCACTTTGTGGGAATTGATATCTTCAATGGGAAGAAGCTCGAAGATATTGTCCCTTCTTCCCACAACTGTGATGTTCCTCATGTTAATCGTACTGATTATCAGTTGATCGATATATCTGAAGATGGTTTTGTCAGTCTTCTTACTGAAAATGGAAACACTAAGGATGATCTGAGGCTTCCTACTGACGACACTCTCCTTACCCAGATCAAAGACGGGTTTGGAGATGGAAAGGACCTCGTGGTGACTGTTATGTCAGCAATGGGAGAGGAGCAGATCTGTGCTCTCAAGGACATTGGTCCTAAGAACTAA | 483 | 44.51 | MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVGIDIFNGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDDTLLTQIKDGFGDGKDLVVTVMSAMGEEQICALKDIGPKN | 160 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 2744791 | 2747358 | - | Conep04aG0062000.1 | Cone4ag0600 | 435578 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone4ag0600 | 160 | MobiDBLite | consensus disorder prediction | 1 | 21 | - | - | |
Cone4ag0600 | 160 | SUPERFAMILY | Translation proteins SH3-like domain | 15 | 93 | IPR008991 | - | |
Cone4ag0600 | 160 | SUPERFAMILY | Nucleic acid-binding proteins | 86 | 156 | IPR012340 | - | |
Cone4ag0600 | 160 | Gene3D | - | 1 | 85 | IPR014722 | - | |
Cone4ag0600 | 160 | ProSitePatterns | Eukaryotic initiation factor 5A hypusine signature. | 50 | 57 | IPR019769 | GO:0003723(InterPro)|GO:0003746(InterPro)|GO:0043022(InterPro)|GO:0045901(InterPro)|GO:0045905(InterPro) | |
Cone4ag0600 | 160 | Pfam | Eukaryotic elongation factor 5A hypusine, DNA-binding OB fold | 85 | 154 | IPR020189 | GO:0003723(InterPro)|GO:0003746(InterPro)|GO:0043022(InterPro)|GO:0045901(InterPro)|GO:0045905(InterPro) | |
Cone4ag0600 | 160 | PIRSF | Transl_init_eIF5A | 1 | 157 | IPR001884 | GO:0003723(InterPro)|GO:0003746(InterPro)|GO:0043022(InterPro)|GO:0045901(InterPro) | |
Cone4ag0600 | 160 | SMART | eIF_5a_2 | 85 | 154 | IPR020189 | GO:0003723(InterPro)|GO:0003746(InterPro)|GO:0043022(InterPro)|GO:0045901(InterPro)|GO:0045905(InterPro) | |
Cone4ag0600 | 160 | Pfam | Translation initiation factor 5A-like, N-terminal | 17 | 79 | IPR048670 | - | |
Cone4ag0600 | 160 | FunFam | Eukaryotic translation initiation factor 5A | 86 | 158 | - | - | |
Cone4ag0600 | 160 | PANTHER | TRANSLATION INITIATION FACTOR 5A FAMILY MEMBER | 1 | 157 | IPR001884 | GO:0003723(InterPro)|GO:0003746(PANTHER)|GO:0003746(InterPro)|GO:0006414(PANTHER)|GO:0043022(InterPro)|GO:0045901(InterPro) | |
Cone4ag0600 | 160 | FunFam | Eukaryotic translation initiation factor 5A | 1 | 85 | - | - | |
Cone4ag0600 | 160 | Gene3D | - | 86 | 159 | IPR012340 | - | |
Cone4ag0600 | 160 | NCBIfam | translation initiation factor IF-5A | 17 | 153 | IPR001884 | GO:0003723(InterPro)|GO:0003746(InterPro)|GO:0043022(InterPro)|GO:0045901(InterPro) | |
Cone4ag0600 | 160 | CDD | S1_eIF5A | 86 | 156 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone16ag0191 | Cone-Chr16:1246812 | Cone4ag0600 | Cone-Chr4:2744791 | 8.04E-107 | dispersed | |
Cone2ag0825 | Cone-Chr2:34254365 | Cone4ag0600 | Cone-Chr4:2744791 | 1.39E-107 | dispersed | |
Cone17ag0983 | Cone-Chr17:7574352 | Cone4ag0600 | Cone-Chr4:2744791 | 2.31E-106 | wgd | |
Cone20ag0323 | Cone-Chr20:1432030 | Cone4ag0600 | Cone-Chr4:2744791 | 1.45E-109 | wgd | |
Cone4ag0600 | Cone-Chr4:2744791 | Cone7ag0570 | Cone-Chr7:2736971 | 4.87E-117 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone4ag0600 | K03263 | - | vvi:100267006 | 313.923 |