Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone4ag0607 ATGATTAAGTATTTGATCCTTGTTTCGTTGTTGATCCACTGCACTTTAGCAGCAGATCATGTACCTCCAACTGATCCTAAGATTCCAGCTAATCCAAATGCTCCAAAGAAATGGCTTACCTTGAATGGTGAAGAGCCACTAGTGATAGCGAGGGGAGGTTTCTCCGGGCTATTTCCAGAAAGCAGTCAATTTGCAAACGAGATGGCAATTCAATTGAGTTTAAGTAACGTTGCCTTGTTCTGCAATGTTCAACTCACAAAAGATTCCGTCGGAATATGCTCATCGGACATTAGGCTCGACAACTTCACAACTATTGCAGTTGCTTTCCCAAAGGGAAAAAAGACTTACAAAGTCAATGGCAAAGAGATGGAAGGATGGTTCGCTAAAGATTTCACTTCTAAAGACCTTTACGACCAAGTTTTTTTGACTCAGAGCATATTCTCTAGGCCGAGTACATTTGATGGGACATTACCCATATCAGCAGTTGATGATGTTGCAGGACTCAGACCACCCCAGTTTTGGATGAACATGCCGTACGATCAATTTTACGCCCAAAACAATCTAAGTGGGATTGAATTCACCAAAAAGTCGATGAGAGGTTTAAGAGCAAATTACCTTTCCTCTCCCGAGATTAACTTCTTGAAGGCCATGAACGGACAAGTGAACAAGATGAGGACAAAGCTTATTTTCCAGTTACTTGATGCCGAAACGGTCGAACCTACAAGCAATCAACAATACGGATCATTTGCCAAAAATCTTTCCTTTGTCAAGACATTTGCTTCTGGAATCCTAGTCCCAAAAGAATATATATGGCCCGTGGCAACCAAATACTTGGGCAATCCTACTAGTTTAGTGATAGATGCTCATAAAGAAGGGCTAGAAGTATATGCTTCTGGTTTTGCAAATGATCTCTTCTCAAGTTATAATTATAGCTTTGATCCGACAAATGAGTACCTTCAATTCATTGATAATGGCGAGTTTTCTGTTGATGGTTTCCTCACTGATTTCCCTCCTACAGCATCAGAAGCCATTGCATGCTTTGCAAATAACAAGAATGCTACAAATCCTAGAAGGCCAAGAACTCTGGTCATAACTAGCAATGGAGCGAGTGGGATTTACCCGGGAGGCTCTGATCTTGCATACCAGCAGGCAGTGGATGATGGAGCAGATATAATAGATTGCTCTGTCCAATTATCTAAAGATGGAGTTGCTTTCTGCTTAGATTCAGCAGATCTCATGGGGAAAACCACTGCCACTACTTCCTTCATGTCCCGTAGTACCACTGTAAAGGAAGTTCAACCCAATGCTGGAATCTTTTCGTTTGATCTCACTTGGAATGAAATCGAAAGCTTGAAGCCTCAATTGGTGAGCCCTTACTTGAATCCCGGAGGATTTGAAAGAAACCCGGCTCACAAGAACAAGGGCAGATTCGTCACCCTCAATGAATTCTTGGAGTTTGCTAAGACAAAGGCAGTAACAGGTGTTTTGATCAACATTAAGAATGCTGGATATCTTGCATCAAGCAAGGGTCTAGACATAGTGGTTACAGTGACCTCAGCCCTAAGCAATGCCACTTTTGACAAGCAATCAACTCAACAAGTTCTAATTCAATCAGATGATTCTTCGGTTCTAATGAAGTTCAAGGATGTGCAAACCTATAAAAGAGTCTTGGCTCTTGACAAGAAAATAGGCGATGCGCCTAAGGATAGAGTGGAGGAGGTTAAGAAGTATGCTGATGCAGTCAATGTACCTAGGGCCTCTATTATGAAGGTTTCTGAATCCTTCACCACAGGCTTAACCAATGTGGTGAACGAAATGCATGCAGCAAACATCTCAGTATATGTCAATGTTCTGAGGAACGAATACATCACACTAGCTTTTGATTATTTCTCAGACCCCATTGTTGAAATAGCTACTTATGTTCAATCGGCTAAAGTTGACGGGATTGTGACTGAATACCCAGGAACTGCCAGCAAATACATGAAAAGCCCATGCACGGATACAGATCCAAAAGCTAAAGTACCATATAACATATTACCGGCCGAACCTGGTTCTTTGCTAACTGCGGCTGCACCGGAAACTCAACCACCAGCCACGGCACCGAACCCACCTCTAGGAGAAGCTGACGTGGTTGACCCACCACTCCCACCCGTAAACATTACCAACAGAGCCCAAACTCCGGCTCCAGGCACTCCTTCGGATTCTAGTACACCAGCGACTGGTTCTGGGGCCTCTGCTCCTTCAAGTGCTTTGGCTAATGTTGCTAACATGGGTCTATCTGTAGTTGCTATTTTGGTTCTGAGCTTGCTCTAA 2313 43.06 MIKYLILVSLLIHCTLAADHVPPTDPKIPANPNAPKKWLTLNGEEPLVIARGGFSGLFPESSQFANEMAIQLSLSNVALFCNVQLTKDSVGICSSDIRLDNFTTIAVAFPKGKKTYKVNGKEMEGWFAKDFTSKDLYDQVFLTQSIFSRPSTFDGTLPISAVDDVAGLRPPQFWMNMPYDQFYAQNNLSGIEFTKKSMRGLRANYLSSPEINFLKAMNGQVNKMRTKLIFQLLDAETVEPTSNQQYGSFAKNLSFVKTFASGILVPKEYIWPVATKYLGNPTSLVIDAHKEGLEVYASGFANDLFSSYNYSFDPTNEYLQFIDNGEFSVDGFLTDFPPTASEAIACFANNKNATNPRRPRTLVITSNGASGIYPGGSDLAYQQAVDDGADIIDCSVQLSKDGVAFCLDSADLMGKTTATTSFMSRSTTVKEVQPNAGIFSFDLTWNEIESLKPQLVSPYLNPGGFERNPAHKNKGRFVTLNEFLEFAKTKAVTGVLINIKNAGYLASSKGLDIVVTVTSALSNATFDKQSTQQVLIQSDDSSVLMKFKDVQTYKRVLALDKKIGDAPKDRVEEVKKYADAVNVPRASIMKVSESFTTGLTNVVNEMHAANISVYVNVLRNEYITLAFDYFSDPIVEIATYVQSAKVDGIVTEYPGTASKYMKSPCTDTDPKAKVPYNILPAEPGSLLTAAAPETQPPATAPNPPLGEADVVDPPLPPVNITNRAQTPAPGTPSDSSTPATGSGASAPSSALANVANMGLSVVAILVLSLL 770
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 2796663 2800300 - Conep04aG0062700.1 Cone4ag0607 435585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone4ag0607 770 FunFam Glycerophosphodiester phosphodiesterase GDPDL3 44 343 - -
Cone4ag0607 770 SUPERFAMILY PLC-like phosphodiesterases 45 343 IPR017946 GO:0006629(InterPro)|GO:0008081(InterPro)
Cone4ag0607 770 ProSiteProfiles GP-PDE domain profile. 361 661 IPR030395 GO:0006629(InterPro)|GO:0008081(InterPro)
Cone4ag0607 770 ProSiteProfiles GP-PDE domain profile. 46 344 IPR030395 GO:0006629(InterPro)|GO:0008081(InterPro)
Cone4ag0607 770 SUPERFAMILY PLC-like phosphodiesterases 360 661 IPR017946 GO:0006629(InterPro)|GO:0008081(InterPro)
Cone4ag0607 770 MobiDBLite consensus disorder prediction 719 748 - -
Cone4ag0607 770 FunFam Glycerophosphodiester phosphodiesterase GDPDL3 359 661 - -
Cone4ag0607 770 CDD GDPD_SHV3_repeat_2 362 660 - -
Cone4ag0607 770 MobiDBLite consensus disorder prediction 696 711 - -
Cone4ag0607 770 CDD GDPD_SHV3_repeat_1 46 343 - -
Cone4ag0607 770 MobiDBLite consensus disorder prediction 689 748 - -
Cone4ag0607 770 Gene3D Phosphatidylinositol (PI) phosphodiesterase 360 662 IPR017946 GO:0006629(InterPro)|GO:0008081(InterPro)
Cone4ag0607 770 Gene3D Phosphatidylinositol (PI) phosphodiesterase 44 344 IPR017946 GO:0006629(InterPro)|GO:0008081(InterPro)
Cone4ag0607 770 PANTHER GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE 6 766 - GO:0008889(PANTHER)
Cone4ag0607 770 Pfam Glycerophosphoryl diester phosphodiesterase family 368 656 IPR030395 GO:0006629(InterPro)|GO:0008081(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone14ag1192 Cone-Chr14:9726814 Cone4ag0607 Cone-Chr4:2796663 3.67E-204 dispersed
Cone15ag1212 Cone-Chr15:9632991 Cone4ag0607 Cone-Chr4:2796663 6.70E-203 dispersed
Cone4ag0607 Cone-Chr4:2796663 Cone9ag0039 Cone-Chr9:167576 6.36E-209 dispersed
Cone4ag0607 Cone-Chr4:2796663 Cone7ag0583 Cone-Chr7:2797196 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone4ag0607 - - - 0.0