Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone4ag0635 ATGTTGACCGTGAAAGCAGGGACTAGGCCGCCATGGGTGGCGCTTGGAGCTTCTGTGTGGATGCAAATAGCATCAGGAAATGCAAACAACTTTCCCCTTTACTCTCACTCGTTGAAATCTGTTCTGGGTTTCAATCAGCATCAGCTAACGATGCTTGGAGTGGCTAATGATATTGGTGAGAACGTGGGCCTTCTTCCTGGATTAGCTTCCAATAAGTTTCCGCCATGGTTGGTGCTTATGATCGGAGCTCTCGCTTGTTTTTTTGGTTATGGTGTCCTTTTTCTTGCTCTCAGCCGTACAGTGCAGTCCATTCCTTATTGGTTGCTATGGATTGCTCTTTGTATAGCGACCAACAGCAATGCATGGTTTACCACAGCCGTGCTTGTAACCAACATGAGAAACTTTCCAGTGAGCCGAGGTACCGTTGCAGCTATTCTCAAAGGTTATGGGGGCCTTAGTGGGGCTGTTTTTACCGAAATTCACAGTGTACTACTTCATAATTCATCTACTAAGCTTCTCTTATTTCTCACTCTTGGAGTTCCAATCCTATGTTTCATTATGATGTACTTTGTTCGGCCCTGCACTCCAGCTTCTGGTGACAATCCGGCTGAGCATGGTCAATTCCGGTTCATTCTAGCTGCAAGTGTCGTTCTTGGGTTATATCTTCTCACTACAACTATTCTAAGTGACATGATTTCTTTAAGTGCTTCGGTTTCTTACACTTTTGTCGGTACTATGGCTCTTCTTCTCATGGCCCCACTTGCCATCCCTATCAAGATGACATTTTTCCGCGCACAATTGGGGACACAACAACTGGTTAGTGGATCTTCGGACAATTTGGTTCGAGATGGGATTAATGTGGAGAAAACGGAACCGCTTTTGACTCCAACTTCATCAACAACAAATCTAACTAGTTCTGGAGAAATCGATGATGCGTCAGAGGTGGCAATGCTTCTTGCCGAGGGGGAGGGTGCAGTGAAGAAGACGAGGAGGCCGAAAAGGGGGGAGGATTTTACTTTTAGTGAAGCAATTGTTAAAGCTGATTTCTGGCTTCTGTTCTTGGTTAATTTTGTTGGAGTAGGCACTGGGGTGACTGTTCTCAATAATTTGGCTCAAATCGGTATTGCATTGGGTGAGGATGATACTACAAGTCTCTTGGCTCTCTTCAGCTTTTGCAATTTTGTTGGCCGTCTAGGTGGCGGTGTTGTTTCAGAGCATTTTGTGAGGACAAGAACAATCCCGCGTACAATTTGGATGGCTTGCACGCAATTGGTAATGATCATTACCTACCTTCTCTTCGCTTCCGCAATAAACGGCATGGTTTATCCTTCCACGGCCTTACTCGGGATATGCTACGGGGCCCAAATCTCTATGATGGTCCCCACAGTTTCTGAGATTTTCGGGTTGAAGCATTTCGGGATTCTTTACAATTTCATGTCTTTAGGGAACCCTCTTGGCGCTTTCCTCTTCTCGGCCCTTTTAGCCGGGTATATATATGATAATGAGGCTGCAAAGCAGCACAAACTCTTGTCCGTGTCTAACACGACATGCTTGGGTCCGAATTGCTTCAGACTAACATTCTTGGTCATGGCTTGCATTTGTGGCGTGGGATCTGTTTTGGGCATTATTCTGACCAAGAGGATTAAGCCTGTTTACCATATGCTTTATTCTGGTGGCTCATTTAGGCTGCCTCAAGGCTCAAATCATTAA 1710 45.32 MLTVKAGTRPPWVALGASVWMQIASGNANNFPLYSHSLKSVLGFNQHQLTMLGVANDIGENVGLLPGLASNKFPPWLVLMIGALACFFGYGVLFLALSRTVQSIPYWLLWIALCIATNSNAWFTTAVLVTNMRNFPVSRGTVAAILKGYGGLSGAVFTEIHSVLLHNSSTKLLLFLTLGVPILCFIMMYFVRPCTPASGDNPAEHGQFRFILAASVVLGLYLLTTTILSDMISLSASVSYTFVGTMALLLMAPLAIPIKMTFFRAQLGTQQLVSGSSDNLVRDGINVEKTEPLLTPTSSTTNLTSSGEIDDASEVAMLLAEGEGAVKKTRRPKRGEDFTFSEAIVKADFWLLFLVNFVGVGTGVTVLNNLAQIGIALGEDDTTSLLALFSFCNFVGRLGGGVVSEHFVRTRTIPRTIWMACTQLVMIITYLLFASAINGMVYPSTALLGICYGAQISMMVPTVSEIFGLKHFGILYNFMSLGNPLGAFLFSALLAGYIYDNEAAKQHKLLSVSNTTCLGPNCFRLTFLVMACICGVGSVLGIILTKRIKPVYHMLYSGGSFRLPQGSNH 569
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 2974147 2980659 + Conep04aG0065500.1 Cone4ag0635 435613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone4ag0635 569 SUPERFAMILY MFS general substrate transporter 14 196 IPR036259 -
Cone4ag0635 569 Pfam Nodulin-like 11 258 IPR010658 -
Cone4ag0635 569 Gene3D MFS general substrate transporter like domains 345 550 IPR036259 -
Cone4ag0635 569 Pfam Major Facilitator Superfamily 352 549 IPR011701 GO:0022857(InterPro)|GO:0055085(InterPro)
Cone4ag0635 569 CDD MFS_Mch1p_like 10 537 - -
Cone4ag0635 569 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 11 551 - GO:0016020(PANTHER)
Cone4ag0635 569 SUPERFAMILY MFS general substrate transporter 330 550 IPR036259 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone16ag0623 Cone-Chr16:7901708 Cone4ag0635 Cone-Chr4:2974147 1.51E-246 dispersed
Cone2ag0382 Cone-Chr2:2013854 Cone4ag0635 Cone-Chr4:2974147 3.52E-245 dispersed
Cone20ag1163 Cone-Chr20:7857844 Cone4ag0635 Cone-Chr4:2974147 9.99E-255 wgd
Cone4ag0635 Cone-Chr4:2974147 Cone7ag0598 Cone-Chr7:2876639 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone4ag0635 - - - 0.0