Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone4ag0644 ATGACTGCGGCGATTTTGCCAGATCTAGGAGCCGAGATACTGATTCCGGTATGTGCCGTAATCGGAATCGTGTTCTCGCTCGTCCAGTGGTACATCGTCTCGCAAGTGAAGCTCACTCCGACGCGAGATTCTCCGGCTAACATCTCTGCAGCTAAGAATGGCTTTTCCGACTCCCTCATTGAAGAAGAAGAAGGTATCAACGACCACAGTGTCGTGGCCAAGTGCGCCGAGATTCAAAATGCCATATCTGAAGGAGCTACCTCCTTCCTCTTTACTGAGTACAAGTATGTCAGTATCTTCATGATTGCTTTTGCAGTCTTAATTTTTCTTTTCCTCGGCTCTGTGGAGGGATTCAGCACTAGCAGTCAGCCATGCACATATGACCAAACAAAGACTTGTAAGCCAGCTTTGGCGACTGCCATATTCAGCACTATATCCTTTTTGCTTGGTGGTATCACTTCTCTGATCTCCGGCTTCCTTGGAATGAAAATTGCCACTTATGCAAATGCAAGAACTACCTTGGAGGCAAGAAAGGGAGTTGGGAAGGCATTCATCACTGCATTCAGATCTGGCGCTGTTATGGGCTTCCTCCTAGCTGCAAATGGTCTTTTGGTTCTTTTTATTGCTATCAACCTCTTTAAAATTTACTATGGTGATGATTGGGGTGGTCTTTTTGAGGCTATCACTGGATATGGTCTTGGTGGATCTTCCATGGCTCTCTTTGGAAGAGTTGGTGGTGGTATCTACACTAAAGCTGCAGATGTTGGGGCTGATCTTGTTGGCAAAGTCGAAAGGAATATTCCTGAGGATGATCCTAGAAACCCAGCTGTGATTGCTGATAATGTTGGAGACAATGTTGGGGATATAGCTGGTATGGGATCTGATCTTTTTGGCTCATATGCTGAGTCTTCCTGTGCTGCCCTTGTTGTTGCTTCCATATCCTCTTTTGGGATTAATCATGATTTGACTGCAATGCTATATCCTCTCCTCATTAGTTCTGTGGGTATCATTGTGTGCCTGATCACCACTTTATTTGCAACTGATTTCTTCGAAATCAAGGCTGTCAAGGAGATTGAACCAGCACTGAAGAAGCAGCTCGTCATTTCCACAGTTCTCATGACTGTCGGAATTGCAATTGTTACATGGGTTTCTGTTCCATCCTCTTTTACTATCTTCAATTTTGGAGTTCAGAAGGAGGTGGAGAACTGGCAACTGTTCTTATGTGTTGCTGTTGGTCTCTGGGCTGGCCTTATCATTGGATTTGTAACTGAGTATTACACTAGCAATGCCTACAGCCCTGTGCAAGACGTTGCTGATTCTTGTCGGACTGGAGCGGCTACAAATGTCATTTTTGGCCTTGCTTTGGGATACAAATCTGTCATCATTCCAATCTTTGCAATTGCCATCAGCATTTTTGTTAGTTTCAGCTTTGCTGCTATGTATGGTATTGCAGTAGCTGCCCTTGGGATGCTTAGTACAATAGCCACAGGTTTGGCCATTGATGCATATGGTCCGATTAGTGATAATGCCGGAGGCATTGCTGAGATGGCAGGCATGAGCCACAGAATCCGAGAGAGAACTGATGCTCTTGATGCTGCCGGAAACACCACTGCTGCCATTGGAAAGGGTTTTGCAATCGGTTCTGCTGCTCTTGTATCTCTAGCACTCTTTGGTGCTTTCGTGAGCCGTGCAGCGATCTCAACCGTTGATGTCTTGACTCCTAAAGTCTTTATCGGTCTACTTGTGGGTGCTATGCTTCCATACTGGTTCTCTGCCATGACCATGAAAAGTGTTGGAAGTGCAGCCCTAAAGATGGTTGAGGAAGTGAGAAGGCAATTCAACACCATTCCAGGTCTCTTGGAGGGTACCACCAAGCCCGATTATGCCACCTGTGTCAAGATCTCTACTGATGCTTCTATTAAAGAGATGATCCCACCTGGTGCCCTTGTCATGCTAACCCCACTTATTGTCGGAATCTTCTTCGGTGTAGAAACTCTTTCTGGTGTCCTTGCCGGAGCCCTTGTCTCGGGCGTACAGATTGCCATCTCTGCATCCAACACAGGTGGTGCTTGGGACAATGCCAAGAAGTACATTGAGGCCGGTGCATCTGAGCATGCTAGAACCCTAGGTCCAAAAGGGTCAGATCCACACAAGGCAGCTGTTATAGGTGACACAATCGGAGATCCCCTCAAGGATACTTCTGGACCTTCTCTTAACATCCTTATCAAGCTAATGGCTGTCGAATCACTTGTTTTTGCACCGTTCTTCGCCACCCATGGTGGCCTTCTCTTTAAGATCTCATTTTAA 2307 46.16 MTAAILPDLGAEILIPVCAVIGIVFSLVQWYIVSQVKLTPTRDSPANISAAKNGFSDSLIEEEEGINDHSVVAKCAEIQNAISEGATSFLFTEYKYVSIFMIAFAVLIFLFLGSVEGFSTSSQPCTYDQTKTCKPALATAIFSTISFLLGGITSLISGFLGMKIATYANARTTLEARKGVGKAFITAFRSGAVMGFLLAANGLLVLFIAINLFKIYYGDDWGGLFEAITGYGLGGSSMALFGRVGGGIYTKAADVGADLVGKVERNIPEDDPRNPAVIADNVGDNVGDIAGMGSDLFGSYAESSCAALVVASISSFGINHDLTAMLYPLLISSVGIIVCLITTLFATDFFEIKAVKEIEPALKKQLVISTVLMTVGIAIVTWVSVPSSFTIFNFGVQKEVENWQLFLCVAVGLWAGLIIGFVTEYYTSNAYSPVQDVADSCRTGAATNVIFGLALGYKSVIIPIFAIAISIFVSFSFAAMYGIAVAALGMLSTIATGLAIDAYGPISDNAGGIAEMAGMSHRIRERTDALDAAGNTTAAIGKGFAIGSAALVSLALFGAFVSRAAISTVDVLTPKVFIGLLVGAMLPYWFSAMTMKSVGSAALKMVEEVRRQFNTIPGLLEGTTKPDYATCVKISTDASIKEMIPPGALVMLTPLIVGIFFGVETLSGVLAGALVSGVQIAISASNTGGAWDNAKKYIEAGASEHARTLGPKGSDPHKAAVIGDTIGDPLKDTSGPSLNILIKLMAVESLVFAPFFATHGGLLFKISF 768
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 3027210 3032042 - Conep04aG0066600.1 Cone4ag0644 435622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone4ag0644 768 PANTHER K(+)-INSENSITIVE PYROPHOSPHATE-ENERGIZED PROTON PUMP 6 765 IPR004131 GO:0004427(InterPro)|GO:0009678(InterPro)|GO:0016020(InterPro)|GO:1902600(InterPro)
Cone4ag0644 768 Pfam Inorganic H+ pyrophosphatase 43 752 IPR004131 GO:0004427(InterPro)|GO:0009678(InterPro)|GO:0016020(InterPro)|GO:1902600(InterPro)
Cone4ag0644 768 NCBIfam V-type H(+)-translocating pyrophosphatase 11 762 IPR004131 GO:0004427(InterPro)|GO:0009678(InterPro)|GO:0016020(InterPro)|GO:1902600(InterPro)
Cone4ag0644 768 PIRSF H+-PPtase 11 765 IPR004131 GO:0004427(InterPro)|GO:0009678(InterPro)|GO:0016020(InterPro)|GO:1902600(InterPro)
Cone4ag0644 768 Hamap Putative K(+)-stimulated pyrophosphate-energized sodium pump [hppA]. 9 757 IPR004131 GO:0004427(InterPro)|GO:0009678(InterPro)|GO:0016020(InterPro)|GO:1902600(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone4ag0871 Cone-Chr4:6057661 Cone4ag0644 Cone-Chr4:3027210 2.86E-148 transposed
Cone17ag0241 Cone-Chr17:1138676 Cone4ag0644 Cone-Chr4:3027210 0 wgd
Cone20ag1170 Cone-Chr20:7893649 Cone4ag0644 Cone-Chr4:3027210 0 wgd
Cone4ag0644 Cone-Chr4:3027210 Cone7ag0605 Cone-Chr7:2923857 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone4ag0644 K23025 - gmx:100775864 1375.92