Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone4ag0668 ATGAAGAGGCACACTAGAAAGGTTGGAAAGTATGAGGTTGGGCGTACGATTGGGGAAGGAACATTTGCCAAGGTTAAGTACGCACAAAACACAGAGACAGGGGAGAGCGTGGCCATGAAAGTTTTGGCCAAAAGCACCATTCTCAAGCACAGAATGGTTGATCAGATTAAGAGAGAGATATCCATAATGAAGATTGTCGGGCATCCAAACATTGTTAGATTGTATGAGGTATTGGCCAGCCGGACAAAGATATATATAATACTAGAGTTTGTTACTGGAGGAGAGCTATATGATAAGATTGTTCACCAAGGGAAGCTTCGTGAAGCAGAGGCTCAAAAATACTTCCAACAGCTTGTTGATGCAGTTGCCCATTGTCACTGTAAGGGCGTGTACCACAGAGATCTAAAGCCTGAAAACCTTCTTCTTGATGCCTTCGGAAATCTGAAGGTTTCTGACTTTGGACTCAGCGCACTGCCGGGTCAAGGAGTTGGTCTTCTTCACACCACATGTGGGACTCCAAATTATGTTGCCCCCGAGGTGCTTCTGGGTGAGGGTTATGATGGTGCAGCTGCTGACATATGGTCATGTGGAGTCATTCTCTATGTTCTAATGGCTGGGTATCTGCCATTTTCAGTTATAGATCTTCCCACTCTATACAAAAAAATAACTGCAGCAGAGTTTTCTTGTCCCATTTGGTTCTCTCCTGGGGCAAAGTCACTAATACAAAAGATTCTTGATCCCAACCCTAAAACTCGCATTCAAATTCAAGAAATCAGAAAAGATCCATGGTTTCGGAAAAACTACATCCCTGCCAAACTTAGGGAAACTCAGGATGTAAATTTGGATGATGTCCGTGCTGTTTTTGAGGACATTGAGCAGGAGAAATATGCTGCTGAGCAGTCAACAGCAGATAAAGAGGGTGGTCCTTTGATAATGAATGCATTTGAGATGATTACCTTATCTCAAGGATTGAATCTATCAGCTCTATTTGACAGGCGTCAAGATTATATAAAGCGGCAAACACGCTTTGTTTCCCGTGAACCACCCCATGTTATAATGTCAACAATTGAAGCCGTAGCAGAGTCAATGAGTCTAAAGGCCCATACACGCCAATACAAGACGAGACTGGAAGGAACCTCCGCAAACAAGGGTGGACAATTTGCAGTTGTTATCGAGGTATATGAAGTTGCATCATCTCTTTTCATGGTCGATTGTCGTAAGGCTGCTGGAGAAACTCTTGAATATCACAAGTTTTACAAGAACCTATGTGTGAAGCTAGAAGATATCATATTGAAACCAAAGGAAGGTATGGTGGATTCTGGTCTATTTAGAACCATGACTTGCTGA 1347 42.84 MKRHTRKVGKYEVGRTIGEGTFAKVKYAQNTETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVGHPNIVRLYEVLASRTKIYIILEFVTGGELYDKIVHQGKLREAEAQKYFQQLVDAVAHCHCKGVYHRDLKPENLLLDAFGNLKVSDFGLSALPGQGVGLLHTTCGTPNYVAPEVLLGEGYDGAAADIWSCGVILYVLMAGYLPFSVIDLPTLYKKITAAEFSCPIWFSPGAKSLIQKILDPNPKTRIQIQEIRKDPWFRKNYIPAKLRETQDVNLDDVRAVFEDIEQEKYAAEQSTADKEGGPLIMNAFEMITLSQGLNLSALFDRRQDYIKRQTRFVSREPPHVIMSTIEAVAESMSLKAHTRQYKTRLEGTSANKGGQFAVVIEVYEVASSLFMVDCRKAAGETLEYHKFYKNLCVKLEDIILKPKEGMVDSGLFRTMTC 448
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 3296691 3302310 + Conep04aG0069600.1 Cone4ag0668 435646
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone4ag0668 448 ProSitePatterns Protein kinases ATP-binding region signature. 17 49 IPR017441 GO:0005524(InterPro)
Cone4ag0668 448 Gene3D Phosphorylase Kinase; domain 1 1 90 - -
Cone4ag0668 448 SUPERFAMILY Protein kinase-like (PK-like) 8 281 IPR011009 -
Cone4ag0668 448 Pfam Protein kinase domain 11 264 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone4ag0668 448 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 4 420 - GO:0004674(PANTHER)|GO:0006468(PANTHER)|GO:0007165(PANTHER)
Cone4ag0668 448 Gene3D Transferase(Phosphotransferase) domain 1 91 272 - -
Cone4ag0668 448 CDD CIPK_C 313 428 - -
Cone4ag0668 448 FunFam Non-specific serine/threonine protein kinase 2 90 - -
Cone4ag0668 448 FunFam Non-specific serine/threonine protein kinase 306 432 - -
Cone4ag0668 448 ProSitePatterns Serine/Threonine protein kinases active-site signature. 130 142 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone4ag0668 448 FunFam Non-specific serine/threonine protein kinase 4 306 - -
Cone4ag0668 448 ProSiteProfiles NAF domain profile. 307 331 IPR018451 GO:0007165(InterPro)
Cone4ag0668 448 SMART serkin_6 11 264 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone4ag0668 448 ProSiteProfiles Protein kinase domain profile. 11 264 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone4ag0668 448 Pfam NAF domain 309 367 IPR004041 GO:0007165(InterPro)
Cone4ag0668 448 Gene3D Kinase associated domain 1, KA1 306 432 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone17ag1162 Cone-Chr17:8567212 Cone4ag0668 Cone-Chr4:3296691 3.48E-214 dispersed
Cone20ag0568 Cone-Chr20:3230502 Cone4ag0668 Cone-Chr4:3296691 9.56E-209 dispersed
Cone4ag0668 Cone-Chr4:3296691 Cone6ag1118 Cone-Chr6:7140717 2.90E-175 dispersed
Cone7ag1375 Cone-Chr7:9934071 Cone4ag0668 Cone-Chr4:3296691 1.56E-32 dispersed
Cone4ag0668 Cone-Chr4:3296691 Cone7ag0630 Cone-Chr7:3198882 4.35E-298 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
82748 None None None None Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone4ag0668 - - - 0.0