Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cone4ag0693 | ATGGAGGAAGAATATCTCTTAGAATGGTTCAAGTTTGCTTTACTTCCATTGATTTTGTTAGTATCATCTGGTCTTATGATTATAATAAAGAAGTTAGTGTACTTGGTTTGGTGGAAACCCAGAAAGATAGAACAACATTTCTTAAGACAAGGAATAAGAGGGCCTCCTTATCGTTTCGTTGTTGGAAATGGCAAAGAAGTAGTTGGAATGATGATCAAGGCTTCCTCTCAGCCTCTGCCTGATCACTCTCACAACATTCTTCCTCGTGTTCTTCCCTTTTATCATCACTGGAAGAAAACCTATGGTGCAACATTTCTTATTTGGTTTGGACCCACAGTCCGACTCACCATCTCGGATCCAAACCTAGTTCGTGAAATTTTCATTTCGAAATCTGAATCATACGAAAAAATCGAAGCGCACCCGCTTGTTAAACAGCTTGAAGGAGATGGTCTTCTTAGTCTCAAAGGTGAAAAATGGGCCCTCCACAGAAAAATCATCGCCCCTACTTTCCATATGGAAAATCTCAAACTGTTGGTACCTATGATGTCAAGTAGTGTAGTAGAAATGGTGGAGAAATGGTGTGCTTCAATGCCAGATTCCAGCGAGATTGAGATCGAAGTTTCGAAGTGGTTTCAAAGCCTAACGGAAGGTTTAATGATAAGAACAGCATTTGGGAGTAGCTATGAAGATGGAAAAGACATTTTCAGACTCCAAGCTCAACAAATGTTGATTGCTGCTCAGGCTTTTCAAAAGGTTCTTTTTCCTGGTTATAGATTTGTACCAACAAGAACAAACTTGAAATCATGGAAATTGGATAATCAAATCAAGAAACTATTAACTAATATAATCGACCGACACAAAGCAAAGTCGGGAAACGGATCATTAAACCTTGATAAAAAAGAATCGGCTAAGGATTTATTAGGGCAATTGATTCAAGCTGGAGGCTCCATTAGTACTAATTGTTCTTCTCCATCATCAACAACTATCACTGTCCATGATATTGTTGAAGAGTGCAAGAGCTTTTTGTTTGCTGGCAAACAAACCACATCCAATTTGTTGACATGGACAACCGTTCTGCTAGCAATGCACCCAAGATGGCAAGTTGAGGCACGTGATGAGGTTCTTAAGGTTTGCGGAGCACGTGACTTACCCACCAAAGATAATGTTGTTAAGCTTAAAACGCTGAGTATGATATTAAACGAGTCCCTACGTTTGTACCCACCAACAATCGCGACAATCCGCCGGGCAAAAGCTGATGTGGAGTTAGGAGGCATGAAGATTCCAAGCGGGACTGAGATTCTAATACCAATCTTGGCGATTCATCATGATCGAACAATATGGGGAAATGATGCAAATGAGTTCAACCCCGCTCGATTTCCATCGGGTCTGACCCATGCGGCTCGTCATCCTACCGCATTCTTTCCATTTGGACTTGGGACTCGCACTTGCATTGGTCAGAACTTGGCTGTTTTGCAAGCGAAATTAGCCCTTGCGATCATACTTCAACGCTTCTCTTTCTGTTTGGGCCCCACATATCAGCATGCACCAACGGTTTTGATGCTACTTTATCCACAACATGGAGCACCCATTATTTTCCAGAAATTGTCTAATTCTCCCGCACTATGA | 1626 | 41.45 | MEEEYLLEWFKFALLPLILLVSSGLMIIIKKLVYLVWWKPRKIEQHFLRQGIRGPPYRFVVGNGKEVVGMMIKASSQPLPDHSHNILPRVLPFYHHWKKTYGATFLIWFGPTVRLTISDPNLVREIFISKSESYEKIEAHPLVKQLEGDGLLSLKGEKWALHRKIIAPTFHMENLKLLVPMMSSSVVEMVEKWCASMPDSSEIEIEVSKWFQSLTEGLMIRTAFGSSYEDGKDIFRLQAQQMLIAAQAFQKVLFPGYRFVPTRTNLKSWKLDNQIKKLLTNIIDRHKAKSGNGSLNLDKKESAKDLLGQLIQAGGSISTNCSSPSSTTITVHDIVEECKSFLFAGKQTTSNLLTWTTVLLAMHPRWQVEARDEVLKVCGARDLPTKDNVVKLKTLSMILNESLRLYPPTIATIRRAKADVELGGMKIPSGTEILIPILAIHHDRTIWGNDANEFNPARFPSGLTHAARHPTAFFPFGLGTRTCIGQNLAVLQAKLALAIILQRFSFCLGPTYQHAPTVLMLLYPQHGAPIIFQKLSNSPAL | 541 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 4 | 3488720 | 3491528 | - | Conep04aG0072200.1 | Cone4ag0693 | 435671 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cone4ag0693 | 541 | Gene3D | Cytochrome P450 | 36 | 537 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone4ag0693 | 541 | PANTHER | CYTOCHROME P450 FAMILY MEMBER | 28 | 527 | IPR050665 | GO:0004497(PANTHER)|GO:0010268(PANTHER)|GO:0016131(PANTHER) | |
| Cone4ag0693 | 541 | PRINTS | E-class P450 group I signature | 98 | 117 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone4ag0693 | 541 | PRINTS | E-class P450 group I signature | 473 | 483 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone4ag0693 | 541 | PRINTS | E-class P450 group I signature | 483 | 506 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone4ag0693 | 541 | PRINTS | E-class P450 group I signature | 353 | 379 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone4ag0693 | 541 | PRINTS | E-class P450 group I signature | 333 | 350 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone4ag0693 | 541 | SUPERFAMILY | Cytochrome P450 | 79 | 533 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone4ag0693 | 541 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 476 | 485 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Cone4ag0693 | 541 | FunFam | Cytochrome P450 734A1 | 37 | 536 | - | - | |
| Cone4ag0693 | 541 | PRINTS | P450 superfamily signature | 483 | 494 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone4ag0693 | 541 | PRINTS | P450 superfamily signature | 474 | 483 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone4ag0693 | 541 | PRINTS | P450 superfamily signature | 397 | 408 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone4ag0693 | 541 | PRINTS | P450 superfamily signature | 344 | 361 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone4ag0693 | 541 | Pfam | Cytochrome P450 | 94 | 510 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cone20ag0146 | Cone-Chr20:655864 | Cone4ag0693 | Cone-Chr4:3488720 | 1.98E-23 | dispersed | |
| Cone4ag0693 | Cone-Chr4:3488720 | Cone9ag0265 | Cone-Chr9:1109986 | 2.19E-138 | dispersed | |
| Cone16ag0777 | Cone-Chr16:8671043 | Cone4ag0693 | Cone-Chr4:3488720 | 6.54E-263 | wgd | |
| Cone2ag0264 | Cone-Chr2:1356998 | Cone4ag0693 | Cone-Chr4:3488720 | 2.35E-262 | wgd | |
| Cone4ag0693 | Cone-Chr4:3488720 | Cone7ag0654 | Cone-Chr7:3350799 | 0 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cone4ag0693 | K15639 | - | rcu:8269549 | 738.028 |