Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cone4ag0693 ATGGAGGAAGAATATCTCTTAGAATGGTTCAAGTTTGCTTTACTTCCATTGATTTTGTTAGTATCATCTGGTCTTATGATTATAATAAAGAAGTTAGTGTACTTGGTTTGGTGGAAACCCAGAAAGATAGAACAACATTTCTTAAGACAAGGAATAAGAGGGCCTCCTTATCGTTTCGTTGTTGGAAATGGCAAAGAAGTAGTTGGAATGATGATCAAGGCTTCCTCTCAGCCTCTGCCTGATCACTCTCACAACATTCTTCCTCGTGTTCTTCCCTTTTATCATCACTGGAAGAAAACCTATGGTGCAACATTTCTTATTTGGTTTGGACCCACAGTCCGACTCACCATCTCGGATCCAAACCTAGTTCGTGAAATTTTCATTTCGAAATCTGAATCATACGAAAAAATCGAAGCGCACCCGCTTGTTAAACAGCTTGAAGGAGATGGTCTTCTTAGTCTCAAAGGTGAAAAATGGGCCCTCCACAGAAAAATCATCGCCCCTACTTTCCATATGGAAAATCTCAAACTGTTGGTACCTATGATGTCAAGTAGTGTAGTAGAAATGGTGGAGAAATGGTGTGCTTCAATGCCAGATTCCAGCGAGATTGAGATCGAAGTTTCGAAGTGGTTTCAAAGCCTAACGGAAGGTTTAATGATAAGAACAGCATTTGGGAGTAGCTATGAAGATGGAAAAGACATTTTCAGACTCCAAGCTCAACAAATGTTGATTGCTGCTCAGGCTTTTCAAAAGGTTCTTTTTCCTGGTTATAGATTTGTACCAACAAGAACAAACTTGAAATCATGGAAATTGGATAATCAAATCAAGAAACTATTAACTAATATAATCGACCGACACAAAGCAAAGTCGGGAAACGGATCATTAAACCTTGATAAAAAAGAATCGGCTAAGGATTTATTAGGGCAATTGATTCAAGCTGGAGGCTCCATTAGTACTAATTGTTCTTCTCCATCATCAACAACTATCACTGTCCATGATATTGTTGAAGAGTGCAAGAGCTTTTTGTTTGCTGGCAAACAAACCACATCCAATTTGTTGACATGGACAACCGTTCTGCTAGCAATGCACCCAAGATGGCAAGTTGAGGCACGTGATGAGGTTCTTAAGGTTTGCGGAGCACGTGACTTACCCACCAAAGATAATGTTGTTAAGCTTAAAACGCTGAGTATGATATTAAACGAGTCCCTACGTTTGTACCCACCAACAATCGCGACAATCCGCCGGGCAAAAGCTGATGTGGAGTTAGGAGGCATGAAGATTCCAAGCGGGACTGAGATTCTAATACCAATCTTGGCGATTCATCATGATCGAACAATATGGGGAAATGATGCAAATGAGTTCAACCCCGCTCGATTTCCATCGGGTCTGACCCATGCGGCTCGTCATCCTACCGCATTCTTTCCATTTGGACTTGGGACTCGCACTTGCATTGGTCAGAACTTGGCTGTTTTGCAAGCGAAATTAGCCCTTGCGATCATACTTCAACGCTTCTCTTTCTGTTTGGGCCCCACATATCAGCATGCACCAACGGTTTTGATGCTACTTTATCCACAACATGGAGCACCCATTATTTTCCAGAAATTGTCTAATTCTCCCGCACTATGA 1626 41.45 MEEEYLLEWFKFALLPLILLVSSGLMIIIKKLVYLVWWKPRKIEQHFLRQGIRGPPYRFVVGNGKEVVGMMIKASSQPLPDHSHNILPRVLPFYHHWKKTYGATFLIWFGPTVRLTISDPNLVREIFISKSESYEKIEAHPLVKQLEGDGLLSLKGEKWALHRKIIAPTFHMENLKLLVPMMSSSVVEMVEKWCASMPDSSEIEIEVSKWFQSLTEGLMIRTAFGSSYEDGKDIFRLQAQQMLIAAQAFQKVLFPGYRFVPTRTNLKSWKLDNQIKKLLTNIIDRHKAKSGNGSLNLDKKESAKDLLGQLIQAGGSISTNCSSPSSTTITVHDIVEECKSFLFAGKQTTSNLLTWTTVLLAMHPRWQVEARDEVLKVCGARDLPTKDNVVKLKTLSMILNESLRLYPPTIATIRRAKADVELGGMKIPSGTEILIPILAIHHDRTIWGNDANEFNPARFPSGLTHAARHPTAFFPFGLGTRTCIGQNLAVLQAKLALAIILQRFSFCLGPTYQHAPTVLMLLYPQHGAPIIFQKLSNSPAL 541
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
4 3488720 3491528 - Conep04aG0072200.1 Cone4ag0693 435671
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cone4ag0693 541 Gene3D Cytochrome P450 36 537 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone4ag0693 541 PANTHER CYTOCHROME P450 FAMILY MEMBER 28 527 IPR050665 GO:0004497(PANTHER)|GO:0010268(PANTHER)|GO:0016131(PANTHER)
Cone4ag0693 541 PRINTS E-class P450 group I signature 98 117 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone4ag0693 541 PRINTS E-class P450 group I signature 473 483 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone4ag0693 541 PRINTS E-class P450 group I signature 483 506 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone4ag0693 541 PRINTS E-class P450 group I signature 353 379 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone4ag0693 541 PRINTS E-class P450 group I signature 333 350 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone4ag0693 541 SUPERFAMILY Cytochrome P450 79 533 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone4ag0693 541 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 476 485 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Cone4ag0693 541 FunFam Cytochrome P450 734A1 37 536 - -
Cone4ag0693 541 PRINTS P450 superfamily signature 483 494 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone4ag0693 541 PRINTS P450 superfamily signature 474 483 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone4ag0693 541 PRINTS P450 superfamily signature 397 408 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone4ag0693 541 PRINTS P450 superfamily signature 344 361 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone4ag0693 541 Pfam Cytochrome P450 94 510 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone20ag0146 Cone-Chr20:655864 Cone4ag0693 Cone-Chr4:3488720 1.98E-23 dispersed
Cone4ag0693 Cone-Chr4:3488720 Cone9ag0265 Cone-Chr9:1109986 2.19E-138 dispersed
Cone16ag0777 Cone-Chr16:8671043 Cone4ag0693 Cone-Chr4:3488720 6.54E-263 wgd
Cone2ag0264 Cone-Chr2:1356998 Cone4ag0693 Cone-Chr4:3488720 2.35E-262 wgd
Cone4ag0693 Cone-Chr4:3488720 Cone7ag0654 Cone-Chr7:3350799 0 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone4ag0693 K15639 - rcu:8269549 738.028