Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cone4ag0695 | ATGCCGCTTGAAAAACAGAATGCGTGGGGCTCTATAAATAGAGTGAAGGTTTTTCAAGTGTCAAGAATGGCGGGATTGATCAGAACCAGAGGAAGGCTTAGGGCTTCAGTGTGTGGTCAGGAGGAGATAGAGCAGATATCGAGAGATGGAAGCCAATACAGCCTTTCTACCGGCGTTTTGCCCTCGCTCGGCGCCAGAAGCAATCGCCGAATCAAGCTACGTCGATTCATTATCTCGCCCTACGACCATCGCTACAGGGCATGGGAAACATTTTTGATCATTTTGGTGGCCTATACTGCCTGGGTCTCGCCATTTGAGTTCGGATTTCTTAGAAAACCAGAGGGACCACTTGCCACTACAGACAATGTAGTCAATGGCTTCTTTGCAGTAGATATTATACTTACTTTCTTTATAGCCTATTTGGACAAAGCCACCTATCTCTTAATTGATGAACCAAAACAGATTGCTTGGAAGTATCTAAGGACTTGGTTTGTCTTTGATGTTATATCAACTATCCCTTCCGAACTTGCTCAGAAGATCTCTCCCTCTCCTTTCCGATCCTATGGATTATTCAACATGCTTCGCCTTTGGCGTCTTAGAAGAGTTAGTGCCATGTTTTCTAGATTGGAAAAAGATAAGAACTTTAACTACTTTTGGGTCCGATGTGCAAAACTCATTTGTGTTACCCTTTTTGCGGTTCACTGTGCCGCATGCTTCTATTATCTTATTGCAGCTCGTTATCGGGACCCAGAAAGGACATGGATTGGATCAACCATGGCTAACTTTCTTGAACAGAGCTTGTGGATTAGATATGTAACTTCCATCTATTGGTCTATTACTACTCTATCAACCGTTGGGTATGGTGATTTGCATCCAGTTAATACAAGAGAGATGCTCTTTGATATCTTCTACATGCTCTTTAACCTTGGCTTGACTGCATATTTGATTGGAAACATGACCAACTTGGTCGTTCATGGTACCAGCCGAACCAGAAAATTTAGGGATACTATACAAGCTGCCTCGAGTTTTGCTCAGAGGAATCAACTTCCTCATAGATTGCAAGATCAAATGCTTGCCCATCTGTGTTTAAAGTATAGAACCGATTCAGAAGGATTGCAGCAGCAAGAAACTCTTGATTTCCTTCCGAAAGCAATCCGCTCTAGCATTTCACATTATCTTTTCTATGGCCTTATGGATAAGGTTTACTTGTTTCAAGGCGTATCAAATGACTTGCTTTTTCAATTGGTCTCAGAGATGAAAGCTGAGTACTTTCCTCCAAAAGAGGATGTGATCTTGCAGAATGAAGCACCCACTGACTTCTACATTCTGGTCACGGGCGCTGTGGATCTAGTGGTTCTTAAAAATGGAGTTGAACAGATTGTTGGAGAGGCGAAAAAAGGTGATCTTTGTGGGGAGATTGGGGTTCTCTGTTACAAGCCACAACTATTTACAGTGCGCACCAAGCGATTGAGCCAACTACTCCGTTTGAACCGTACCACCTTCTTGAATATCGTTCAGGCAAATGTTGGAGATGGAACTATAATTATGAATAATCTTCTTCAGCATTTGAAAGACTTGAAAGACCCGATAATGGAGGGAGTTTTGTTGGAAACAGAGAACATGCTGGCTCGTGGAAGAATGGACTTACCTCTCAGTCTATGCTTTGCAGCATCTCGTGGAGATGACTTATTGTTGCATCAGCTTTTAAGGCGGGGCCTTGATCCAAATGAATCTGATAATATGGGAAGGACAGCCCTGCATATAGCAGCATCAAAAGGAAGTGAGAATAGTGTGCTTCTTTTACTTGATTATGGAGCTGAACCGAACAGCATAGATTCAGATGGGAATGTACCATTATGGGAAGCAATGCTAGGTGGGTATGAACCAATAATCAAGCTTCTACTAGACAATGGAGCAAATCTTCGAAAAGGAGACGGTGGTCAATTCTCATGCACAGCTGCAGAACAAAACAGCCTTAACTTGCTCAAACAAATTCTTCGGTTTGGAGGAGACATCACTTCTCCTAAAAGCAGCAATGGAGTTACAGCTCTCCATGTGGCGGTTTGCGAAGAGAATATGGAGATAGTCAAGTTCCTATTGGACCAAGGTGCTGACATAGACAAACCAGACATGGACGGGTGGACCCCACGAGATCTAGCTGACCAACAGGGACACGAAGAAATTAAAGCCCTCTTCATGTCAAGAAAAGAGCTACAGCCTCAATCAGTTATTGAGGCCCCTCCTAGGAAGAGTGAGGTTAAGTTCCTTGGAAGATTTACAAGCGAGCCGAATATAAGACCTTCAGCCCAAGAGGGGTCCTTTAATAACACGGATGTGTCATGGGGTCAGTCAAGACCTAGGCGTAGGACTAATAATTATAATAATTCGTTGATTGGAATAATGTCTGCTGCTCATTCTGGGGAGAAAGACGTGTTATCTTATGTTAATCAGACTGTTAATGAGAGGACTAACCGAGATGATGGTGTGAGAGTGACGGTCAGCTGCCCGGAGAGTGGTCAAGTGGGCGGGAAGCTTGTGCTTCTGCCCGGGAGTTTCAAGGAGTTGCTTGAGATTGGGGCTAAGAAGTTTGGGGTGATGCCGATAAAAGTTGTAAGTAAAGATGGAGCTGAAATTGAAGATATAGATGTAATTAGGGATGGAGATCACTTGACTTTTATTTGCGGTGGTGTAATGCAAGATACTATTAGCCAAAACTGTCAAACTAATGACGTTTTCTAA | 2739 | 43.15 | MPLEKQNAWGSINRVKVFQVSRMAGLIRTRGRLRASVCGQEEIEQISRDGSQYSLSTGVLPSLGARSNRRIKLRRFIISPYDHRYRAWETFLIILVAYTAWVSPFEFGFLRKPEGPLATTDNVVNGFFAVDIILTFFIAYLDKATYLLIDEPKQIAWKYLRTWFVFDVISTIPSELAQKISPSPFRSYGLFNMLRLWRLRRVSAMFSRLEKDKNFNYFWVRCAKLICVTLFAVHCAACFYYLIAARYRDPERTWIGSTMANFLEQSLWIRYVTSIYWSITTLSTVGYGDLHPVNTREMLFDIFYMLFNLGLTAYLIGNMTNLVVHGTSRTRKFRDTIQAASSFAQRNQLPHRLQDQMLAHLCLKYRTDSEGLQQQETLDFLPKAIRSSISHYLFYGLMDKVYLFQGVSNDLLFQLVSEMKAEYFPPKEDVILQNEAPTDFYILVTGAVDLVVLKNGVEQIVGEAKKGDLCGEIGVLCYKPQLFTVRTKRLSQLLRLNRTTFLNIVQANVGDGTIIMNNLLQHLKDLKDPIMEGVLLETENMLARGRMDLPLSLCFAASRGDDLLLHQLLRRGLDPNESDNMGRTALHIAASKGSENSVLLLLDYGAEPNSIDSDGNVPLWEAMLGGYEPIIKLLLDNGANLRKGDGGQFSCTAAEQNSLNLLKQILRFGGDITSPKSSNGVTALHVAVCEENMEIVKFLLDQGADIDKPDMDGWTPRDLADQQGHEEIKALFMSRKELQPQSVIEAPPRKSEVKFLGRFTSEPNIRPSAQEGSFNNTDVSWGQSRPRRRTNNYNNSLIGIMSAAHSGEKDVLSYVNQTVNERTNRDDGVRVTVSCPESGQVGGKLVLLPGSFKELLEIGAKKFGVMPIKVVSKDGAEIEDIDVIRDGDHLTFICGGVMQDTISQNCQTNDVF | 912 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 4 | 3541652 | 3546211 | + | Conep04aG0072400.1 | Cone4ag0695 | 435673 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cone4ag0695 | 912 | ProSiteProfiles | Ankyrin repeat profile. | 679 | 711 | IPR002110 | GO:0005515(InterPro) | |
| Cone4ag0695 | 912 | PRINTS | EAG/ELK/ERG potassium channel family signature | 297 | 308 | IPR003938 | GO:0005249(InterPro)|GO:0006813(InterPro)|GO:0016020(InterPro) | |
| Cone4ag0695 | 912 | PRINTS | EAG/ELK/ERG potassium channel family signature | 271 | 288 | IPR003938 | GO:0005249(InterPro)|GO:0006813(InterPro)|GO:0016020(InterPro) | |
| Cone4ag0695 | 912 | PRINTS | EAG/ELK/ERG potassium channel family signature | 98 | 105 | IPR003938 | GO:0005249(InterPro)|GO:0006813(InterPro)|GO:0016020(InterPro) | |
| Cone4ag0695 | 912 | PRINTS | EAG/ELK/ERG potassium channel family signature | 121 | 131 | IPR003938 | GO:0005249(InterPro)|GO:0006813(InterPro)|GO:0016020(InterPro) | |
| Cone4ag0695 | 912 | PRINTS | EAG/ELK/ERG potassium channel family signature | 315 | 324 | IPR003938 | GO:0005249(InterPro)|GO:0006813(InterPro)|GO:0016020(InterPro) | |
| Cone4ag0695 | 912 | PRINTS | EAG/ELK/ERG potassium channel family signature | 132 | 141 | IPR003938 | GO:0005249(InterPro)|GO:0006813(InterPro)|GO:0016020(InterPro) | |
| Cone4ag0695 | 912 | SUPERFAMILY | cAMP-binding domain-like | 328 | 523 | IPR018490 | - | |
| Cone4ag0695 | 912 | SMART | cnmp_10 | 403 | 520 | IPR000595 | - | |
| Cone4ag0695 | 912 | ProSiteProfiles | Ankyrin repeat profile. | 614 | 646 | IPR002110 | GO:0005515(InterPro) | |
| Cone4ag0695 | 912 | MobiDBLite | consensus disorder prediction | 765 | 788 | - | - | |
| Cone4ag0695 | 912 | Pfam | KHA, dimerisation domain of potassium ion channel | 830 | 891 | IPR021789 | - | |
| Cone4ag0695 | 912 | FunFam | Potassium channel SKOR | 86 | 324 | - | - | |
| Cone4ag0695 | 912 | FunFam | Potassium channel KAT2 | 391 | 527 | - | - | |
| Cone4ag0695 | 912 | PANTHER | POTASSIUM CHANNEL AKT1 | 45 | 891 | IPR045319 | GO:0005249(InterPro)|GO:0006813(InterPro) | |
| Cone4ag0695 | 912 | Gene3D | Jelly Rolls | 367 | 527 | IPR014710 | - | |
| Cone4ag0695 | 912 | ProSiteProfiles | Ankyrin repeat region circular profile. | 614 | 641 | - | - | |
| Cone4ag0695 | 912 | ProSiteProfiles | KHA domain profile. | 830 | 910 | IPR021789 | - | |
| Cone4ag0695 | 912 | PRINTS | Ankyrin repeat signature | 695 | 709 | IPR002110 | GO:0005515(InterPro) | |
| Cone4ag0695 | 912 | PRINTS | Ankyrin repeat signature | 582 | 597 | IPR002110 | GO:0005515(InterPro) | |
| Cone4ag0695 | 912 | SUPERFAMILY | Voltage-gated potassium channels | 80 | 324 | - | - | |
| Cone4ag0695 | 912 | ProSiteProfiles | Ankyrin repeat region circular profile. | 679 | 710 | - | - | |
| Cone4ag0695 | 912 | Gene3D | - | 549 | 734 | IPR036770 | - | |
| Cone4ag0695 | 912 | Pfam | Ion transport protein | 85 | 330 | IPR005821 | GO:0005216(InterPro)|GO:0006811(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
| Cone4ag0695 | 912 | Pfam | Ankyrin repeats (3 copies) | 653 | 731 | IPR002110 | GO:0005515(InterPro) | |
| Cone4ag0695 | 912 | Pfam | Ankyrin repeats (3 copies) | 553 | 643 | IPR002110 | GO:0005515(InterPro) | |
| Cone4ag0695 | 912 | ProSiteProfiles | cAMP/cGMP binding motif profile. | 403 | 505 | IPR000595 | - | |
| Cone4ag0695 | 912 | ProSiteProfiles | Ankyrin repeat profile. | 581 | 613 | IPR002110 | GO:0005515(InterPro) | |
| Cone4ag0695 | 912 | CDD | CAP_ED | 403 | 508 | IPR000595 | - | |
| Cone4ag0695 | 912 | Gene3D | - | 88 | 324 | - | - | |
| Cone4ag0695 | 912 | SUPERFAMILY | Ankyrin repeat | 552 | 734 | IPR036770 | - | |
| Cone4ag0695 | 912 | SMART | ANK_2a | 581 | 610 | IPR002110 | GO:0005515(InterPro) | |
| Cone4ag0695 | 912 | SMART | ANK_2a | 548 | 577 | IPR002110 | GO:0005515(InterPro) | |
| Cone4ag0695 | 912 | SMART | ANK_2a | 645 | 674 | IPR002110 | GO:0005515(InterPro) | |
| Cone4ag0695 | 912 | SMART | ANK_2a | 679 | 708 | IPR002110 | GO:0005515(InterPro) | |
| Cone4ag0695 | 912 | SMART | ANK_2a | 614 | 643 | IPR002110 | GO:0005515(InterPro) | |
| Cone4ag0695 | 912 | ProSiteProfiles | Ankyrin repeat region circular profile. | 581 | 612 | - | - | |
| Cone4ag0695 | 912 | Pfam | Cyclic nucleotide-binding domain | 422 | 508 | IPR000595 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cone4ag0695 | Cone-Chr4:3541652 | Cone6ag0891 | Cone-Chr6:4562253 | 2.02E-214 | dispersed | |
| Cone4ag0695 | Cone-Chr4:3541652 | Cone7ag0655 | Cone-Chr7:3406157 | 0 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cone4ag0695 | K21867 | - | csv:101220784 | 1414.44 |