Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cone4ag0696 ATGAAGGGGGAAGTGCAGTTGGAGCCACCAAGCTCGCAAAACCTTTGTGACTCCGATCCTCTGCTAGGGAATCAGGGTGATTTATCGCCAGCAAGTTCCAGTGAGATTCAGAAGGATGAAGATATTGAAACTAGTTCTGTTCCCTGCTGTCGTATTTGCCTTGAGAGCGATGTTGATGCAGGTGATGAACTGATATCACCATGCATGTGCAAAGGAACCCAACAGTTTGTTCATCGATCATGCCTTGATCATTGGCGGTCTATCAAGGAAGGGTTTGCGTTTTCCCATTGCACAACTTGCAAGGCTCAATTTCATCTTCGAGTTGAATTGTTTGAGGAGAATTATTGGCATACAATAAAGTTCAGAGTATTTGTGGCAAGAGATGTTCTTCTCGTATTTTTTTCTGTACAAACTTTAATTGCTGCAATGGGTGGCTTTGCATATCTCATGGACAAAGATGGTACCTTCAGGAATTCGTTTAGCGATGGATGGGATCGCATTCTATCCAAACATCCTATACCATTCTATTACTGCATAGGGGTGCTAGCATTCTTTGTTCTACTTGGATTTTTCGGGCTCATACTACATTGCTCCTCCCTTACCAACGATCCAAGACTAGCAGGCTGCCACAACTGTTGTTATGGATGTGGTATTTTGGATTGCTTTCCTGCATCCATGGAGGCTTGCTTTGCTCTGGTCATTGTTTTCATTGTTATATTTGCCATTCTTGGTATAGCTTATGGTTTTCTTGCTGCAACAATGGCCATTCAGAGGATCTGGCAGAGACATTACCACATTCTCACCAAGAGGGAACTCACTAAGGAGTATATAGTGGAGGATCTTCAGGGTTCTTATACCCCTCCAGAATTGGATTCCATACACGAAGAACGGCTGAAAGCGCTTAAACTATTGTAG 915 43.17 MKGEVQLEPPSSQNLCDSDPLLGNQGDLSPASSSEIQKDEDIETSSVPCCRICLESDVDAGDELISPCMCKGTQQFVHRSCLDHWRSIKEGFAFSHCTTCKAQFHLRVELFEENYWHTIKFRVFVARDVLLVFFSVQTLIAAMGGFAYLMDKDGTFRNSFSDGWDRILSKHPIPFYYCIGVLAFFVLLGFFGLILHCSSLTNDPRLAGCHNCCYGCGILDCFPASMEACFALVIVFIVIFAILGIAYGFLAATMAIQRIWQRHYHILTKRELTKEYIVEDLQGSYTPPELDSIHEERLKALKLL 304
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
4 3554211 3557365 - Conep04aG0072500.1 Cone4ag0696 435674
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cone4ag0696 304 ProSiteProfiles Zinc finger RING-CH-type profile. 42 107 IPR011016 GO:0008270(InterPro)
Cone4ag0696 304 SMART ringv_2 49 101 IPR011016 GO:0008270(InterPro)
Cone4ag0696 304 SUPERFAMILY RING/U-box 45 105 - -
Cone4ag0696 304 CDD RING_CH-C4HC3_MARCH 50 101 - -
Cone4ag0696 304 MobiDBLite consensus disorder prediction 7 33 - -
Cone4ag0696 304 PANTHER RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN 12 303 - -
Cone4ag0696 304 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 33 113 IPR013083 -
Cone4ag0696 304 MobiDBLite consensus disorder prediction 1 40 - -
Cone4ag0696 304 Pfam RING-variant domain 50 100 IPR011016 GO:0008270(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone4ag0696 Cone-Chr4:3554211 Cone6ag1592 Cone-Chr6:12370439 1.37E-62 dispersed
Cone4ag0696 Cone-Chr4:3554211 Cone7ag0656 Cone-Chr7:3420822 8.27E-217 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone4ag0696 - - - 0.0