Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone4ag0696 | ATGAAGGGGGAAGTGCAGTTGGAGCCACCAAGCTCGCAAAACCTTTGTGACTCCGATCCTCTGCTAGGGAATCAGGGTGATTTATCGCCAGCAAGTTCCAGTGAGATTCAGAAGGATGAAGATATTGAAACTAGTTCTGTTCCCTGCTGTCGTATTTGCCTTGAGAGCGATGTTGATGCAGGTGATGAACTGATATCACCATGCATGTGCAAAGGAACCCAACAGTTTGTTCATCGATCATGCCTTGATCATTGGCGGTCTATCAAGGAAGGGTTTGCGTTTTCCCATTGCACAACTTGCAAGGCTCAATTTCATCTTCGAGTTGAATTGTTTGAGGAGAATTATTGGCATACAATAAAGTTCAGAGTATTTGTGGCAAGAGATGTTCTTCTCGTATTTTTTTCTGTACAAACTTTAATTGCTGCAATGGGTGGCTTTGCATATCTCATGGACAAAGATGGTACCTTCAGGAATTCGTTTAGCGATGGATGGGATCGCATTCTATCCAAACATCCTATACCATTCTATTACTGCATAGGGGTGCTAGCATTCTTTGTTCTACTTGGATTTTTCGGGCTCATACTACATTGCTCCTCCCTTACCAACGATCCAAGACTAGCAGGCTGCCACAACTGTTGTTATGGATGTGGTATTTTGGATTGCTTTCCTGCATCCATGGAGGCTTGCTTTGCTCTGGTCATTGTTTTCATTGTTATATTTGCCATTCTTGGTATAGCTTATGGTTTTCTTGCTGCAACAATGGCCATTCAGAGGATCTGGCAGAGACATTACCACATTCTCACCAAGAGGGAACTCACTAAGGAGTATATAGTGGAGGATCTTCAGGGTTCTTATACCCCTCCAGAATTGGATTCCATACACGAAGAACGGCTGAAAGCGCTTAAACTATTGTAG | 915 | 43.17 | MKGEVQLEPPSSQNLCDSDPLLGNQGDLSPASSSEIQKDEDIETSSVPCCRICLESDVDAGDELISPCMCKGTQQFVHRSCLDHWRSIKEGFAFSHCTTCKAQFHLRVELFEENYWHTIKFRVFVARDVLLVFFSVQTLIAAMGGFAYLMDKDGTFRNSFSDGWDRILSKHPIPFYYCIGVLAFFVLLGFFGLILHCSSLTNDPRLAGCHNCCYGCGILDCFPASMEACFALVIVFIVIFAILGIAYGFLAATMAIQRIWQRHYHILTKRELTKEYIVEDLQGSYTPPELDSIHEERLKALKLL | 304 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 3554211 | 3557365 | - | Conep04aG0072500.1 | Cone4ag0696 | 435674 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone4ag0696 | 304 | ProSiteProfiles | Zinc finger RING-CH-type profile. | 42 | 107 | IPR011016 | GO:0008270(InterPro) | |
Cone4ag0696 | 304 | SMART | ringv_2 | 49 | 101 | IPR011016 | GO:0008270(InterPro) | |
Cone4ag0696 | 304 | SUPERFAMILY | RING/U-box | 45 | 105 | - | - | |
Cone4ag0696 | 304 | CDD | RING_CH-C4HC3_MARCH | 50 | 101 | - | - | |
Cone4ag0696 | 304 | MobiDBLite | consensus disorder prediction | 7 | 33 | - | - | |
Cone4ag0696 | 304 | PANTHER | RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN | 12 | 303 | - | - | |
Cone4ag0696 | 304 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 33 | 113 | IPR013083 | - | |
Cone4ag0696 | 304 | MobiDBLite | consensus disorder prediction | 1 | 40 | - | - | |
Cone4ag0696 | 304 | Pfam | RING-variant domain | 50 | 100 | IPR011016 | GO:0008270(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone4ag0696 | Cone-Chr4:3554211 | Cone6ag1592 | Cone-Chr6:12370439 | 1.37E-62 | dispersed | |
Cone4ag0696 | Cone-Chr4:3554211 | Cone7ag0656 | Cone-Chr7:3420822 | 8.27E-217 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone4ag0696 | - | - | - | 0.0 |