Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone4ag0703 ATGGCTGTGATTCTTACCTCTAGTCGGGGGGACGGTAACGTTATCATCTCACTCGTATCATTTCTTCTACTGCTACTGAGTCGCCGTCTCAATTCGGAGCCAACTCAGGACAAGCAACCTCTCCTTGCTTTTCTAACTCAGACCCCGCACGAGAACAGGGTTCAATGGAACGCCTCCGACTCGGTCTGCAACTGGGTCGGTGTCGTCTGCGACGCCAACCAATCCTACGTGTCGGAGCTCCGTTTACCCGGAGTGGGCCTCCTGGGCCCGATTCGGCCCAACACTATCGGCCTGCTGAGTCAGCTCCGAGTCTTGAGTCTCCGCTCTAACCGCCTCTCCGGCACAATCCCCTCCGATTTCTCGAACTTGACTCTCCTTCGCAATCTCTACCTTCAAGACAACGAGCTCTCCGGAGAGTTCCCGCCCACACTGACTCGCTTGACTCGGTTGAATCGTCTCGACCTCTCATCTAACAACTTCACCGGCTCAATCCCGTTCTCCATCAACAACCTCACTCAATTGACCGGACTTTTCTTACAAAGCAATAACTTCTCAGGCAAGCTTCCGAGCATTGCAACCGGATTAAAAAGCTTCAACGTGTCGAACAACAATCTCAACGGTTCGATCCCGAAAACTTTATCTCACTTCACTAAGTCATCATTCTCCGGCAACTTAGATCTCTGCGGCGGACCATTACCTCCGTGCAGCCCATTCTTTCCGTCCCCAGCTCCTTCACCGACGGAACCAGAAACTCCACCAAAAACAGCCGCTAAAAAGTCCAAAAAGAAGCTCTCAAAAGGCGCCATTATTGGAATCATAATCGCCGCCGTATTCCTCGCGCTCATAGTACTCCTTCTACTCCTCTTCCTCTGCCTACGGAACCGTCGACGACAACCAGCTAAACCCCCCGCACCCGCATCCACCACCACCGTGGCTCGTTCTGTCCCGGCGGTGGAGGCAGGAACATCCTCGTCGAAGGACGACATTACAGGAGGATCGTCAATGGAAGCGGGAGAGAGAAATAAGCTAGTGTTTTTCGGAGGAGGGGGGTACAGTTTTGATCTGGAGGATCTGTTGAGAGCGTCGGCGGAGGTGTTGGGGAAGGGGAGTGTAGGAACGTCGTATAAGGCGGTGCTGGAGGAAGGGACGACGGTGGTGGTGAAGAGGTTGAAGGACGTGGTGGCGACGAAGAAGGAGTTCGAATCGGTAATGGAGGATTTAGGGAAGGTGATGAAGCATGAGAATGTGGTTCCTCTTCGTGCCTATTACTATTCCAAGGATGAGAAATTGCTCGTCTCTGATTTCATGCCGGCTGGTAGCCTGTCTGCTTCACTTCACGGTAGTCGGGGCTCAGGCCGGACCCCGCTCGACTGGGACCGAAGGATGAGAATAGCACTAAACTCAGCCAAAGGGCTGGCTCACCTACACCACTCCAACATAGTCCACGGCAACATAAAATCCTCCAACGTCCTCCTCCGCCGAGACGAGGCTTCTGTCTCCGACTTTGGGCTCAGCCCGCTATTTGGGACATCAACCCCACCCAACCGCGTTGCGGGTTACCGGGCCCCGGAAGTAATTGAGACTCGAAAGCCCACATTCAAGTCCGACATTTACAGTTTGGGCGTATTGCTGTTAGAACTCTTAACAGGAAAAGCACCCAATCAGGCGTCATTGAGCGAGGAGGGGATCGATCTTCCAAGGTGGGTCCAGTCGGTCGTTAGGGAAGAATGGACTGCCGAGGTTTTTGACGTGGAGTTGATCAGGTACCATCATGATATTGAAGAGGAGATGGTTCAGTTGTTGCAAATAGCAATGTCGTGCGTGTCCACTGTGCCTGATCAGAGGCCTACCGTACAGGATGTGGTCCGTATGATTGAGGAGATTAATAGAGGTGGAGGAGGAGGGGATCAGACCACTGATGATGGGTTACGACAGTCGTCTGATGAGCCATCTAAAGGATCTGGTGGTCAAACCCCGGCTGAATCGAGGACCCCACCTAGTGTCGTCACACCTTAA 2016 53.12 MAVILTSSRGDGNVIISLVSFLLLLLSRRLNSEPTQDKQPLLAFLTQTPHENRVQWNASDSVCNWVGVVCDANQSYVSELRLPGVGLLGPIRPNTIGLLSQLRVLSLRSNRLSGTIPSDFSNLTLLRNLYLQDNELSGEFPPTLTRLTRLNRLDLSSNNFTGSIPFSINNLTQLTGLFLQSNNFSGKLPSIATGLKSFNVSNNNLNGSIPKTLSHFTKSSFSGNLDLCGGPLPPCSPFFPSPAPSPTEPETPPKTAAKKSKKKLSKGAIIGIIIAAVFLALIVLLLLLFLCLRNRRRQPAKPPAPASTTTVARSVPAVEAGTSSSKDDITGGSSMEAGERNKLVFFGGGGYSFDLEDLLRASAEVLGKGSVGTSYKAVLEEGTTVVVKRLKDVVATKKEFESVMEDLGKVMKHENVVPLRAYYYSKDEKLLVSDFMPAGSLSASLHGSRGSGRTPLDWDRRMRIALNSAKGLAHLHHSNIVHGNIKSSNVLLRRDEASVSDFGLSPLFGTSTPPNRVAGYRAPEVIETRKPTFKSDIYSLGVLLLELLTGKAPNQASLSEEGIDLPRWVQSVVREEWTAEVFDVELIRYHHDIEEEMVQLLQIAMSCVSTVPDQRPTVQDVVRMIEEINRGGGGGDQTTDDGLRQSSDEPSKGSGGQTPAESRTPPSVVTP 671
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 3675336 3678526 - Conep04aG0073200.1 Cone4ag0703 435681
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone4ag0703 671 Pfam Leucine rich repeat N-terminal domain 36 71 IPR013210 -
Cone4ag0703 671 PANTHER OS05G0588300 PROTEIN 18 635 IPR050994 -
Cone4ag0703 671 SUPERFAMILY L domain-like 59 228 - -
Cone4ag0703 671 MobiDBLite consensus disorder prediction 238 260 - -
Cone4ag0703 671 FunFam Probable inactive receptor kinase RLK902 34 192 - -
Cone4ag0703 671 Pfam Leucine Rich Repeat 150 171 IPR001611 GO:0005515(InterPro)
Cone4ag0703 671 Pfam Leucine Rich Repeat 195 215 IPR001611 GO:0005515(InterPro)
Cone4ag0703 671 Gene3D Phosphorylase Kinase; domain 1 332 435 - -
Cone4ag0703 671 MobiDBLite consensus disorder prediction 648 671 - -
Cone4ag0703 671 Gene3D Ribonuclease Inhibitor 194 236 IPR032675 -
Cone4ag0703 671 SUPERFAMILY Protein kinase-like (PK-like) 364 627 IPR011009 -
Cone4ag0703 671 FunFam pollen receptor-like kinase 1 330 435 - -
Cone4ag0703 671 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 436 634 - -
Cone4ag0703 671 MobiDBLite consensus disorder prediction 303 331 - -
Cone4ag0703 671 Pfam Leucine rich repeat 88 136 IPR001611 GO:0005515(InterPro)
Cone4ag0703 671 Gene3D Ribonuclease Inhibitor 35 192 IPR032675 -
Cone4ag0703 671 Pfam Protein kinase domain 364 623 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone4ag0703 671 Gene3D Transferase(Phosphotransferase) domain 1 436 640 - -
Cone4ag0703 671 MobiDBLite consensus disorder prediction 298 334 - -
Cone4ag0703 671 ProSiteProfiles Protein kinase domain profile. 360 628 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone4ag0703 671 MobiDBLite consensus disorder prediction 628 671 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone4ag0703 Cone-Chr4:3675336 Cone7ag0668 Cone-Chr7:3576910 0 dispersed
Cone16ag0765 Cone-Chr16:8626927 Cone4ag0703 Cone-Chr4:3675336 3.12E-230 wgd
Cone2ag0274 Cone-Chr2:1410258 Cone4ag0703 Cone-Chr4:3675336 9.68E-234 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
82750 PF04770 ZF-HD_dimer 2.70E-28 No_clan Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone4ag0703 - - - 0.0