Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone4ag0716 | ATGAAGAAGACTCACTGCGACATCAGCTTTGGCCTCTCGCTACTTCTCATTGCTTTCTTCTTCACAGCTCTACTTCATGCTTCTGCTTCTGAGAAGCTTTTCTCTCTGTCGAACAATGGCGGCGGCCTCACTGACACTGAAGCTTTCTACATCAAGCAACGCCAGCTTCTCTACTACAGAGACGAGTTCGGTGACAGAGGTGAGAACGTCACCGTCGATCCTTCTTTAATCTTCGAAAACGGAAGGATTCGAAATGCTTACATCGCTTTACAAGCTTGGAAACAAGCTATTCTTTCTGATCCACTAAACTTCACTGTCGACTGGACCGGATCTGATGTCTGTAACTACACTGGAGTTTTCTGTGCTCCGGCGCCGGATAATCACCGGATCCGAACCGTCGCCGGCATTGATCTAAACCACGGTGACATTGCCGGTTACTTACCGGAAGAGCTAGGTTTACTTGTAGATCTTGCTCTGTTTCACATTAACTCGAACAGGTTCTGTGGCACAGTGCCTCATAAGTTCAGGAATATGAAGCGGCTTTTCGAACTGGATCTGAGCAACAATCGATTCGCCGGAAAGTTTCCTGAAGTTGTTCTTAAGCTTCCGTCGCTTAAATTCTTGGATCTGAGATTTAACGAGTTTGAAGGCGCTGTTCCGAAGCAGCTCTTCGACAAGGATCTGGACGCCATTTTCATAAACCACAATCGATTCAGGTTCGAGCTGCCGGAAAATTTCGGTAACTCTCCGGTCTCCGTGATAGTGCTGGCGGACAACAAGTTTCATGGCTGCGTGCCGGCGAGCTTAGGCAACATGACGAGGCTGAACGAGATTATACTGATGAACAATGGCTTCCGCTCATGCTTACCGCCTGAGATAGGGTTTCTGAAAAACTTAACGGTGTTCGATGTGAGCTATAACGAACTCCTCGGTCCACTGCCAGACACGATCGGAGGAATGGTGAGCTTAGAGCAACTGAACGTAGCGCATAATTTGCTCTCGGGGAATATTCCGGCGAGCATTTGTCAGTTGCCGAATCTACAGAACTTCACGTTTTCGTACAATTTCTTCACGGGCGAACCGCCGGTTTGTTTGAGATTAGCAGATTTTGATGACCGGAGAAACTGCTTGCCTGGAAGGTCGTTACAGAGATCTAGTGCGCAATGTAATTCCTTCTTGTCTAAGCCTGTGGATTGTAACTCGTTTGGATGTGCTTCTTTTGGACCTTCTCCGCCTGTTCATCCCACTCCCCATTCGCCGCCACATTCAACACCTGGTGGGGCGCACTCGCCCGCCTTTCCTCCGCAGGTTTCTTCGCCTTCACCTGTTCACCAATCTCCCCATTTGCCGCCACATTCAACACCTGGTGTGGCGCACTCGCCCACCCTCTCTCCTCCAGTTTCTCCGCCTTCTCCTCCTGTTCATCGCTCTCCCCAGTCGCCGCCACATTCATCATCTGGTGGGGCACACTCGCCCTCCCATTCGCCCCAATCACAACCCACGCCCGGTTCGCCCCCTCTTACATCACCACTGTCTCCACCTTCACCCTCCCCATCAACACCACCAATCTACTCTCCTGCCCCTTCGACATCTTCTGCACCTCCAGTTTACTCTCCTCCCGCCCCACATCTGCCATCAATTTCACCAACCCCTTCATATCCGCAAAAACCGCCAATAAGTTCTCCAGGACCATCATCTCCAACCCCATCTCCATCTCCATCTCCATCTCCATCTCCAGGCCTACCTCCACCGTATTCTTCGCCACCACTGCCATCAACCTCGCCACAACCATCATCTCCATCACCATCTCCGCCCCCATCCCCGTCCCTACCTCCATTATATTCTTCACCACCAACGCCATCGATTTCTCCACAGCCATCATCATCTCCATATTGTTCACCACTATTGCCTCCACTATATTCTCCGCCGCCATTACCCACTCCCCCACATTTACCTCCACCGCTAGTTTATCCCTATCCACCACCACCACCATCTCCTCCATCAGCTTCACAGCCACCTCCATCTCCACCTCCATCACCATCGTCTTCACCTCCTCCACCCATTCACTATGTATCTCCCGCTTCACCATCACCTCCTTCACCCCATCCCTATACATATTACTCACCACCCCCACCATCTCCATCACCTCCTCCACCCACTCATTATCTACCTCCCGCTTCACCATCACCTCCTTCACCTCCTCCCTCTACATATTACTCACCTCCCCAACCATCTCCATCACCTCCTCCCTATACATATTATTCACATCCACCTCCACCTCCGCCTCCATCACCATCACCTCCACCACCCTATGTGTATCACTCACCTCCTCCACCACCTCCAATACAATACCATTCACATCCTCCACCAACTCTCTCACCACCATTGCCTTCTCCTCCTCATCCATATAATTCCCCACCACCACCGCCAATTCAGTACCATTCTCCTCCCCCTCCATCACCCCCTCCAGTCTCACATGAGTGTCCTCCGCCCTCTGCACCACCACCACCACCACCAATTGTTATCTACCAAAGCCCCCCACCTCCTATGCCCGTGTATGAGGGGCCTTTGCCGCCAATCCATGGAGTTTCGTATGCTTCCCCCCCTCCACCACCCTTCTATTGA | 2625 | 51.66 | MKKTHCDISFGLSLLLIAFFFTALLHASASEKLFSLSNNGGGLTDTEAFYIKQRQLLYYRDEFGDRGENVTVDPSLIFENGRIRNAYIALQAWKQAILSDPLNFTVDWTGSDVCNYTGVFCAPAPDNHRIRTVAGIDLNHGDIAGYLPEELGLLVDLALFHINSNRFCGTVPHKFRNMKRLFELDLSNNRFAGKFPEVVLKLPSLKFLDLRFNEFEGAVPKQLFDKDLDAIFINHNRFRFELPENFGNSPVSVIVLADNKFHGCVPASLGNMTRLNEIILMNNGFRSCLPPEIGFLKNLTVFDVSYNELLGPLPDTIGGMVSLEQLNVAHNLLSGNIPASICQLPNLQNFTFSYNFFTGEPPVCLRLADFDDRRNCLPGRSLQRSSAQCNSFLSKPVDCNSFGCASFGPSPPVHPTPHSPPHSTPGGAHSPAFPPQVSSPSPVHQSPHLPPHSTPGVAHSPTLSPPVSPPSPPVHRSPQSPPHSSSGGAHSPSHSPQSQPTPGSPPLTSPLSPPSPSPSTPPIYSPAPSTSSAPPVYSPPAPHLPSISPTPSYPQKPPISSPGPSSPTPSPSPSPSPSPGLPPPYSSPPLPSTSPQPSSPSPSPPPSPSLPPLYSSPPTPSISPQPSSSPYCSPLLPPLYSPPPLPTPPHLPPPLVYPYPPPPPSPPSASQPPPSPPPSPSSSPPPPIHYVSPASPSPPSPHPYTYYSPPPPSPSPPPPTHYLPPASPSPPSPPPSTYYSPPQPSPSPPPYTYYSHPPPPPPPSPSPPPPYVYHSPPPPPPIQYHSHPPPTLSPPLPSPPHPYNSPPPPPIQYHSPPPPSPPPVSHECPPPSAPPPPPPIVIYQSPPPPMPVYEGPLPPIHGVSYASPPPPPFY | 874 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 3857442 | 3860731 | - | Conep04aG0074500.1 | Cone4ag0716 | 435694 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone4ag0716 | 874 | MobiDBLite | consensus disorder prediction | 462 | 479 | - | - | |
Cone4ag0716 | 874 | MobiDBLite | consensus disorder prediction | 480 | 497 | - | - | |
Cone4ag0716 | 874 | FunFam | Leucine-rich repeat extensin-like protein 5 | 249 | 388 | - | - | |
Cone4ag0716 | 874 | PRINTS | Proline rich extensin signature | 493 | 510 | - | - | |
Cone4ag0716 | 874 | PRINTS | Proline rich extensin signature | 409 | 421 | - | - | |
Cone4ag0716 | 874 | PRINTS | Proline rich extensin signature | 466 | 482 | - | - | |
Cone4ag0716 | 874 | PRINTS | Proline rich extensin signature | 431 | 452 | - | - | |
Cone4ag0716 | 874 | PRINTS | Proline rich extensin signature | 514 | 539 | - | - | |
Cone4ag0716 | 874 | MobiDBLite | consensus disorder prediction | 413 | 428 | - | - | |
Cone4ag0716 | 874 | FunFam | Leucine-rich repeat extensin-like protein 1 | 87 | 248 | - | - | |
Cone4ag0716 | 874 | Pfam | Leucine rich repeat | 159 | 214 | IPR001611 | GO:0005515(InterPro) | |
Cone4ag0716 | 874 | Pfam | Leucine rich repeat N-terminal domain | 89 | 121 | IPR013210 | - | |
Cone4ag0716 | 874 | Gene3D | Ribonuclease Inhibitor | 86 | 375 | IPR032675 | - | |
Cone4ag0716 | 874 | PANTHER | LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED | 29 | 537 | IPR051582 | - | |
Cone4ag0716 | 874 | MobiDBLite | consensus disorder prediction | 435 | 449 | - | - | |
Cone4ag0716 | 874 | MobiDBLite | consensus disorder prediction | 413 | 842 | - | - | |
Cone4ag0716 | 874 | MobiDBLite | consensus disorder prediction | 498 | 842 | - | - | |
Cone4ag0716 | 874 | Pfam | Leucine Rich Repeat | 298 | 320 | IPR001611 | GO:0005515(InterPro) | |
Cone4ag0716 | 874 | Pfam | Leucine Rich Repeat | 322 | 344 | IPR001611 | GO:0005515(InterPro) | |
Cone4ag0716 | 874 | SUPERFAMILY | L domain-like | 87 | 365 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone4ag0716 | Cone-Chr4:3857442 | Cone5ag1503 | Cone-Chr5:10171994 | 7.68E-40 | dispersed | |
Cone16ag0754 | Cone-Chr16:8541821 | Cone4ag0716 | Cone-Chr4:3857442 | 1.33E-88 | wgd | |
Cone2ag0284 | Cone-Chr2:1476204 | Cone4ag0716 | Cone-Chr4:3857442 | 8.87E-86 | wgd | |
Cone4ag0716 | Cone-Chr4:3857442 | Cone4ag1835 | Cone-Chr4:13239822 | 3.24E-62 | wgd | |
Cone4ag0716 | Cone-Chr4:3857442 | Cone7ag0673 | Cone-Chr7:3656919 | 6.13E-154 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone4ag0716 | - | - | - | 0.0 |