Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cone4ag0719 | ATGGAAAATCACAAAAATGGCAGCTCTGATGAGTCTCTTTCCAAGACCCCCACCATCAAGTTTACCAAGCTTTTCATCAATGGAGAGTTTGTTGACTCTCTTTCAGGAAAAACATTTGAGACGGTAGATCCAAGAACAGAGGAGGTGACAGCAAGGATAGCTGAAGGAGACAAAGAAGATGTTGATTTAGCCGTCAAAGCTGCTCGTCATGCCTTCGATCATGGTCCTTGGCCTCGTCTTCCTGGTTTTGAGAGAGGAAGGATCATGATGAAATTTGCAGACTTGATAGACGAACATGCAGAAGAATTAGCAGCACTAGACACCATTGATGCCGGAAAGCTATTTAGTGGAGGGAAATCAGTGGACATTCCGCAAGCTGCAAACACGCTACGATACTACGCTGGTGCAGCAGATAAAATCCACGGGGAGGTGTTGAAACTATCACGTGACCTGCATGGGTATACATTGCTAGAGCCGATCGGTGTTGTGGGCCACATCATCCCCTGGAACTTCCCGTCCACCATGTTCCTTGCCAAGATTAGCCCGGCCTTAGCTGCGGGTTGCACCATGATTGTCAAGCCGGCAGAGCAGACCCCTCTTTCAGCTCTCTTTAATGCCCATCTTGCCAAGTTGGCTGGAATTCCTGATGGAGTTGTCAACGTCATAACTGGATTTGGATCAACAGCTGGAGCTGCCATTAGCTCTCATATGGACGTTGACAAGGTGAGTTTCACAGGATCTACGGAAGTTGGACGTGAAATAATGCATGCTGCAGGAAATAGCAATTTGAAGGCAATCTCCCTAGAATTAGGAGGCAAATCTCCACTCCTTATCTTTGATGATGCTGATGTAGATAAAGCTGCTCAACTTGCTCTTATCGGCGTTCTTTATAACAAGGGAGAAATTTGTGTGGCAAGTTCTAGGGTACTTGTGCAAGAAGGAATTTATGATGAATTTGTAGCAAAAATAGTGAAATTGGCAAAGGGTTGGCCTGTTGGGGACCCATTTGACCCTAAAGTTCAGCAAGGACCCCAAGTGGACAAGAAGCAGTTCGAGAAAATCCTTTTATATATAGAAATTGGAAAGAAGGAGGGAGCTACTCTCTTAACAGGAGGCAAGCCTATTGGCAATAAGGGATACTACATTGAGCCCACAATATTTACTGATGTTAAGGAAGACATGGTGATAGCACAAGATGAAATCTTCGGACCCGTCATGTCACTCATGAAATTCAAGAGTATTGAGGACGGAATAAAGAAAGCAAACAATACAAGATATGGATTAGCAGCAGGCATTGTGACCAAGAACATAGACACTGCAAACACGGTCTCAAGGTCAATCAGAGCTGGAATAATTTGGATCAACTGCTATTTTGCTTTCGATAGAGGGTGCCCTTATGGAGGGTATAAGATGAGTGGGTTCGGAAGAGACTTTGGAATGGAAGCACTCCACAAGTATCTCCAAGTTAAATCTGTTGTCACCCCTTTATACAATTCCCCTTGGCTTTGA | 1509 | 44.6 | MENHKNGSSDESLSKTPTIKFTKLFINGEFVDSLSGKTFETVDPRTEEVTARIAEGDKEDVDLAVKAARHAFDHGPWPRLPGFERGRIMMKFADLIDEHAEELAALDTIDAGKLFSGGKSVDIPQAANTLRYYAGAADKIHGEVLKLSRDLHGYTLLEPIGVVGHIIPWNFPSTMFLAKISPALAAGCTMIVKPAEQTPLSALFNAHLAKLAGIPDGVVNVITGFGSTAGAAISSHMDVDKVSFTGSTEVGREIMHAAGNSNLKAISLELGGKSPLLIFDDADVDKAAQLALIGVLYNKGEICVASSRVLVQEGIYDEFVAKIVKLAKGWPVGDPFDPKVQQGPQVDKKQFEKILLYIEIGKKEGATLLTGGKPIGNKGYYIEPTIFTDVKEDMVIAQDEIFGPVMSLMKFKSIEDGIKKANNTRYGLAAGIVTKNIDTANTVSRSIRAGIIWINCYFAFDRGCPYGGYKMSGFGRDFGMEALHKYLQVKSVVTPLYNSPWL | 502 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 4 | 3888724 | 3891599 | - | Conep04aG0074800.1 | Cone4ag0719 | 435697 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cone4ag0719 | 502 | FunFam | Aldehyde dehydrogenase3 | 272 | 461 | - | - | |
| Cone4ag0719 | 502 | PANTHER | ALDEHYDE DEHYDROGENASE-RELATED | 14 | 494 | - | GO:0004029(PANTHER) | |
| Cone4ag0719 | 502 | Gene3D | Aldehyde Dehydrogenase; Chain A, domain 2 | 272 | 461 | IPR016163 | GO:0016620(InterPro) | |
| Cone4ag0719 | 502 | Pfam | Aldehyde dehydrogenase family | 31 | 492 | IPR015590 | GO:0016491(InterPro) | |
| Cone4ag0719 | 502 | Gene3D | Aldehyde Dehydrogenase; Chain A, domain 1 | 26 | 490 | IPR016162 | GO:0016491(InterPro) | |
| Cone4ag0719 | 502 | ProSitePatterns | Aldehyde dehydrogenases cysteine active site. | 296 | 307 | IPR016160 | GO:0016491(InterPro) | |
| Cone4ag0719 | 502 | FunFam | Aldehyde dehydrogenase, putative | 464 | 490 | - | - | |
| Cone4ag0719 | 502 | SUPERFAMILY | ALDH-like | 17 | 498 | IPR016161 | GO:0016491(InterPro) | |
| Cone4ag0719 | 502 | FunFam | ALD5p Mitochondrial aldehyde dehydrogenase | 26 | 289 | - | - | |
| Cone4ag0719 | 502 | ProSitePatterns | Aldehyde dehydrogenases glutamic acid active site. | 268 | 275 | IPR029510 | GO:0016491(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cone20ag1340 | Cone-Chr20:8635729 | Cone4ag0719 | Cone-Chr4:3888724 | 2.51E-51 | dispersed | |
| Cone4ag0719 | Cone-Chr4:3888724 | Cone8ag0655 | Cone-Chr8:6514282 | 2.64E-201 | dispersed | |
| Cone16ag0751 | Cone-Chr16:8521129 | Cone4ag0719 | Cone-Chr4:3888724 | 5.34E-300 | wgd | |
| Cone4ag0719 | Cone-Chr4:3888724 | Cone7ag0693 | Cone-Chr7:3928633 | 0 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cone4ag0719 | K12355 | - | mdm:103400588 | 840.491 |