Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone4ag0731 | ATGTCAACCCCAACTCCCGGAGCCTCTCCGGCTCCGACGTCTCCGCCTGCCACTAATACTACCTCGCCTCCTGCGCCTAATGCACCGCCGCCATCGACTCCCTCTACACCTCCACCTTCTTCGGCACCACCACCTTCTACTCCAGCCACGCCATCTCCACCACCTACTTCAGCTCCGCCGCCTTCTACTCCCTCGTCTCCGCCCCCGCCAGCTTCGACTGGACCACCACCTTCCACCACTCCCTCTCCTCCTCCACCTGTTTCAACAGCCCCTCCGCCAGCTACCACTTCTTCCCCACCGCCTCCGTCAGGAACTACTCCCGCTCCCTCAACATCCTCTACTCCTCCTCCTCCTCCTCCTCCTACTCCTTCAACCTCACCTCCGACGAACTCCTCTGTATCTCCGCCGCCGCCGTCTTCTACCACATCGCCTCCTCCTTCTTCCGCAGTGCTTCTAAGTCCACCTCCCCCGTCAACTTCTGGAACTCCCTCCACTCCGTCGAAAAGTCCTCCGCCACCACCTCCAGCAACTAATTCGTCCTCGTCTTCTTCTTCATCGTCGTCCGGAATATCTTCCGGAGCCGTGATCGGAATGGTGATCGGGGGCGTAGCAGTCTTAGCAGTGTTAGCCATTCTGTTCATTTTGTTCTGCAGAAAGAAGAGAAGAACCGACGACGAAGCCGGTTACTACCCCCCGCCCCCACCTAGAAACCCGAAAGATGATCCTTACGGCGGCGGGCCCCCACAAAACTGGCGGCAAAACGCTCCGCCACCAATAGACCCATTCACCGGAGTAGCTAAGCCCCCTCCACCTCCAGGTTCTGCACTAAGACCTCCATACTCACCCATAAACCCACAATACTTAAGCATGAGTGGAAATTCCGGTTCCAACAACTCCGGGCCCGAAAACCCCCAGACACCGCCACCTGGCATGGGTGGCATGGGCTTTTCAAAGAGCACTTTCACTTACGAGGACCTGGCTCTGGCAACGGATGGTTTCTCGGATGCTAATCTGCTCGGACAAGGCGGGTTTGGGTACGTGCATAGAGGGATTTTAGCAGGGGGGAAAGAGGTAGCAATCAAGCAGTTAAAGGCTGGAAGTGGTCAAGGCGAGAGGGAGTTTCAAGCCGAAGTGGAGATTATTAGCCGGGTCCATCATAAACATCTTGTTTCCTTGGTCGGGTATTGTTCGACTGGCTCCGAGAGGTTGTTGGTGTACGAATTTGTCCCAAACAATACCTTGGAGTTCCATTTACATGGAAAAGGGCGGCCTACCATGGAATGGTCGACTAGATTGAAGATCGCATTAGGATCTGCAAAAGGGCTTGCATACCTTCACGAAGATTGTCAACCAAAAATCATTCATCGGGACATCAAAGCGGCTAATATACTTTTGGATTTCAAGTTTGAAGCAATGGTTGCTGATTTTGGACTGGCTAAGTTTTTTTCTGAGCTTAATACTCATGTATCCACCCGAGTAATGGGAACCTTTGGGTACATGGCTCCAGAATATGCTTCCAGTGGGAAACTCACTGAGAAATCCGATGTTTTCTCTTTTGGGGTCATGCTTTTAGAGTTGATCACAGGACGTAAACCTGTCGATACGACTCAGACTTTCATGGAGGATAGCTTGGTAGACTGGGCGAGGCCTTTACTGAACCGAGCTCTGGATGACGGAAACTTTGATGCTTTGGCTGATCCAAGGCTGCAAAATAATTATAATAAGGATGAAATGGCTCGAGTCATTGCTTGCGCTGCTGCTTGTGTTCGCCATTCTGGTAGGCGCCGGCCAAAGATGAGTCAGGTGGTCCGTACTTTGGAAGGGGATGCATCACTCTCGGATCTAAACGATGGGATCAGACCCGGGCATAGCTCAATTTACAGTGGAAGCTCGGACTATGACGCAAGCCAATACAATGAGGACTTGAAGAAATTCCGGAAGATGGCTTTGGGGAGCCAGGAGTACGGTGCAAGCAGTGAGTATAGTGCACCCACGACCAGTGAGTACGGTTTGAACCCCTCCGGCTCGAGCAGTGAGGTTCAGACCACGCAGGAAATGGAGCTTGGGACGATGCGGAAGAGAGAAAGTAAATAA | 2094 | 52.77 | MSTPTPGASPAPTSPPATNTTSPPAPNAPPPSTPSTPPPSSAPPPSTPATPSPPPTSAPPPSTPSSPPPPASTGPPPSTTPSPPPPVSTAPPPATTSSPPPPSGTTPAPSTSSTPPPPPPPTPSTSPPTNSSVSPPPPSSTTSPPPSSAVLLSPPPPSTSGTPSTPSKSPPPPPPATNSSSSSSSSSSGISSGAVIGMVIGGVAVLAVLAILFILFCRKKRRTDDEAGYYPPPPPRNPKDDPYGGGPPQNWRQNAPPPIDPFTGVAKPPPPPGSALRPPYSPINPQYLSMSGNSGSNNSGPENPQTPPPGMGGMGFSKSTFTYEDLALATDGFSDANLLGQGGFGYVHRGILAGGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYCSTGSERLLVYEFVPNNTLEFHLHGKGRPTMEWSTRLKIALGSAKGLAYLHEDCQPKIIHRDIKAANILLDFKFEAMVADFGLAKFFSELNTHVSTRVMGTFGYMAPEYASSGKLTEKSDVFSFGVMLLELITGRKPVDTTQTFMEDSLVDWARPLLNRALDDGNFDALADPRLQNNYNKDEMARVIACAAACVRHSGRRRPKMSQVVRTLEGDASLSDLNDGIRPGHSSIYSGSSDYDASQYNEDLKKFRKMALGSQEYGASSEYSAPTTSEYGLNPSGSSSEVQTTQEMELGTMRKRESK | 697 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 4028971 | 4032277 | + | Conep04aG0076000.1 | Cone4ag0731 | 435709 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone4ag0731 | 697 | MobiDBLite | consensus disorder prediction | 251 | 279 | - | - | |
Cone4ag0731 | 697 | SUPERFAMILY | Protein kinase-like (PK-like) | 311 | 606 | IPR011009 | - | |
Cone4ag0731 | 697 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 453 | 465 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cone4ag0731 | 697 | CDD | TM_EGFR-like | 194 | 222 | - | - | |
Cone4ag0731 | 697 | SMART | serkin_6 | 333 | 569 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cone4ag0731 | 697 | MobiDBLite | consensus disorder prediction | 1 | 192 | - | - | |
Cone4ag0731 | 697 | ProSitePatterns | Protein kinases ATP-binding region signature. | 339 | 361 | IPR017441 | GO:0005524(InterPro) | |
Cone4ag0731 | 697 | FunFam | proline-rich receptor-like protein kinase PERK1 | 311 | 408 | - | - | |
Cone4ag0731 | 697 | MobiDBLite | consensus disorder prediction | 228 | 242 | - | - | |
Cone4ag0731 | 697 | MobiDBLite | consensus disorder prediction | 612 | 634 | - | - | |
Cone4ag0731 | 697 | Gene3D | Transferase(Phosphotransferase) domain 1 | 409 | 617 | - | - | |
Cone4ag0731 | 697 | MobiDBLite | consensus disorder prediction | 224 | 317 | - | - | |
Cone4ag0731 | 697 | Pfam | Protein tyrosine and serine/threonine kinase | 338 | 606 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cone4ag0731 | 697 | MobiDBLite | consensus disorder prediction | 1 | 178 | - | - | |
Cone4ag0731 | 697 | Gene3D | Phosphorylase Kinase; domain 1 | 313 | 408 | - | - | |
Cone4ag0731 | 697 | MobiDBLite | consensus disorder prediction | 654 | 697 | - | - | |
Cone4ag0731 | 697 | ProSiteProfiles | Protein kinase domain profile. | 333 | 612 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cone4ag0731 | 697 | FunFam | Proline-rich receptor-like protein kinase PERK1 | 409 | 617 | - | - | |
Cone4ag0731 | 697 | MobiDBLite | consensus disorder prediction | 655 | 687 | - | - | |
Cone4ag0731 | 697 | PANTHER | PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 | 162 | 648 | IPR047117 | - | |
Cone4ag0731 | 697 | MobiDBLite | consensus disorder prediction | 284 | 301 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone4ag0731 | Cone-Chr4:4028971 | Cone6ag1615 | Cone-Chr6:12479507 | 3.55E-181 | dispersed | |
Cone16ag0743 | Cone-Chr16:8484471 | Cone4ag0731 | Cone-Chr4:4028971 | 4.47E-218 | wgd | |
Cone17ag0111 | Cone-Chr17:581592 | Cone4ag0731 | Cone-Chr4:4028971 | 3.57E-94 | wgd | |
Cone2ag0294 | Cone-Chr2:1523880 | Cone4ag0731 | Cone-Chr4:4028971 | 1.19E-224 | wgd | |
Cone20ag1276 | Cone-Chr20:8330605 | Cone4ag0731 | Cone-Chr4:4028971 | 6.42E-59 | wgd | |
Cone4ag0731 | Cone-Chr4:4028971 | Cone4ag0940 | Cone-Chr4:7847132 | 1.51E-64 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
82751 | PF00069 | Pkinase | 1.60E-40 | CL0016 | Cone | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone4ag0731 | - | - | - | 0.0 |