Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone4ag0740 ATGGGGGAAGGAGAGGGAGGAGGGGATTTGCCTCCGAAGAATGTTCAATCTGATGGTGCGCCGCCTAGCAACGCTGTGTCGTCGGATATTCCTGCTAAGAGGCTTGCAAGGCAGCTGGATTTTACGGGATTTGGCGGAGGAGAAGTAGTTTCAGGAAGCTCGGTTTTTCCAGAGCATCCTCAGCCTCAATTATCGTCACAGTCTCAGTCGCAACCTGTCAAGGGATCACGGAGTACTTCCTTGCAGTTGCCGTCGCAATCTCAGCCACAGATGGTCGCCATGCCTATGGGCCCCCAGGTGCAACATTCTTCAACTAGGCCCATAAAACCAGAGTCCCCAAAGTCAAGACCAAGATCCAATGTTGAAGCAAAAGAAGGCACTCCAAAAAAGCAGAAGCAGTGCAACTGTAAACATTCACGCTGCTTAAAGTTGTATTGTGAATGTTTTGCATCGGGAATATACTGTGATGGGTGTAATTGCAATAATTGTTATAACAATGTTGAAAATGAAGCTGCTAGACGAGAGGCAGTAGAAGCCACTCTAGAGCGCAATCCGAATGCATTCCGACCAAAAATTGCAAGTAGTCCACATGGAACACAAGATAACCGGGAGGAAGCTGGAGATGTTTTACTATTGGGAAAACACAACAAAGGATGCCATTGTAAGAAATCAGGGTGTCTGAAAAAGTATTGTGAGTGCTTCCAAGCAAACATTCTTTGCTCTGATAATTGTAAATGCATGGATTGTAAAAACTTCGAGGGAAGTGAGGAGAGACTGGCTCTATTCCATGGTGACCACGGAAACAACATTGCATATATTCAGCAGGCAGCCAATGCAGCAATAACCGGAGCTATTGGATCCTCTGGCTATGCATCATCTCCTCCTGTTTCCAAGAAAAGAAAAAGTCACGAGCTCTTCTATGGACCAAATGCAAAGGATCCATCCGTTCATAAGCTTGCACAATATCAACAGGCGAACAATGTTCGGGTGGCCCCGTCTTTGCTTCCTGCTGTCCCAGGTGCTCGTGTTGGTGGTCCTGCGACACTAGGCCCTTCAAAGTTCACATACAGGTCTTTGTTAGCAGACATCATTCAACCTCAAGACTTGAAGGAGCTTTGCTCCATTTTGGTGGTCTTATCAAGTGAAGCAGCTAAGACCCTCGCAGAACAAAAAAATGCCACAGAAAAGCGAGCAGAGGATCAGGCACAAACTTCTGTTGCTTCTTCAACTCAAAATGGGTTGCAGAGCCAGAAGGAACTGGGTGTGAAAGCAGTGGCTGATCGCTCAAGTGCAAACCAAGACAGTAAAGCTGATGCAGATGATTCAAGTTCAGACGGTTCAGATGTGCCTAAAACAAGGCCAATGTCCCCTGGAACCTTAGCTTTGATGTGTGATGAACAAGACACAATGTTCATGGCAGCAGCTTCTCCTACAGGGTTTGTGGGCCATAGCTGCAGTACATCATCACAGTTGCCTTACGGACAAGACATGACAGAAGTCTACGCTGAGCAGGAGCGAATTGTCATGACAAAGTTTCGAGACTGTCTTAACCGGCTCATCACTCTAGGGGAGATTAAAGAAACAAATCGGTCGTCTTTTGCTAGAAATGAAGTAGGGAGCGAGAAAGACCAGCATAGCAATGGCAACGCAAATATGAGAAGCGAAACTGGAAGTCAACCAAGACCGCCCACTAGTAATGGGGTCTTGAAATCTGTTGTTCCTTCTACATCCAAGACATCACAAATAATTACAGAATTGACTTCGGAGCAAGATTCAATTCCGACTTTCCCATCAATGTCCGAAAATGGGAATACCAAGCCATGGATTGAGAAAAAGATGTAG 1842 45.98 MGEGEGGGDLPPKNVQSDGAPPSNAVSSDIPAKRLARQLDFTGFGGGEVVSGSSVFPEHPQPQLSSQSQSQPVKGSRSTSLQLPSQSQPQMVAMPMGPQVQHSSTRPIKPESPKSRPRSNVEAKEGTPKKQKQCNCKHSRCLKLYCECFASGIYCDGCNCNNCYNNVENEAARREAVEATLERNPNAFRPKIASSPHGTQDNREEAGDVLLLGKHNKGCHCKKSGCLKKYCECFQANILCSDNCKCMDCKNFEGSEERLALFHGDHGNNIAYIQQAANAAITGAIGSSGYASSPPVSKKRKSHELFYGPNAKDPSVHKLAQYQQANNVRVAPSLLPAVPGARVGGPATLGPSKFTYRSLLADIIQPQDLKELCSILVVLSSEAAKTLAEQKNATEKRAEDQAQTSVASSTQNGLQSQKELGVKAVADRSSANQDSKADADDSSSDGSDVPKTRPMSPGTLALMCDEQDTMFMAAASPTGFVGHSCSTSSQLPYGQDMTEVYAEQERIVMTKFRDCLNRLITLGEIKETNRSSFARNEVGSEKDQHSNGNANMRSETGSQPRPPTSNGVLKSVVPSTSKTSQIITELTSEQDSIPTFPSMSENGNTKPWIEKKM 613
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 4067839 4073123 - Conep04aG0077200.1 Cone4ag0740 435718
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone4ag0740 613 MobiDBLite consensus disorder prediction 1 129 - -
Cone4ag0740 613 MobiDBLite consensus disorder prediction 433 447 - -
Cone4ag0740 613 ProSiteProfiles CRC domain profile. 130 254 IPR005172 -
Cone4ag0740 613 MobiDBLite consensus disorder prediction 390 459 - -
Cone4ag0740 613 MobiDBLite consensus disorder prediction 56 108 - -
Cone4ag0740 613 PANTHER TESMIN/TSO1-RELATED 59 527 IPR028307 GO:0005634(PANTHER)|GO:0006355(PANTHER)
Cone4ag0740 613 MobiDBLite consensus disorder prediction 399 418 - -
Cone4ag0740 613 SMART CXC_2 214 255 IPR033467 -
Cone4ag0740 613 SMART CXC_2 129 169 IPR033467 -
Cone4ag0740 613 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 217 251 IPR005172 -
Cone4ag0740 613 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 131 166 IPR005172 -
Cone4ag0740 613 MobiDBLite consensus disorder prediction 543 605 - -
Cone4ag0740 613 MobiDBLite consensus disorder prediction 109 129 - -
Cone4ag0740 613 Coils Coil 164 184 - -
Cone4ag0740 613 MobiDBLite consensus disorder prediction 533 613 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone4ag0740 Cone-Chr4:4067839 Cone7ag0270 Cone-Chr7:1123293 1.84E-32 dispersed
Cone16ag0733 Cone-Chr16:8445233 Cone4ag0740 Cone-Chr4:4067839 1.24E-220 wgd
Cone2ag0303 Cone-Chr2:1559684 Cone4ag0740 Cone-Chr4:4067839 7.60E-226 wgd
Cone4ag0740 Cone-Chr4:4067839 Cone7ag0677 Cone-Chr7:3722160 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
45943 PF00069 Pkinase 4.20E-42 CL0016 Cone TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone4ag0740 - - - 0.0