Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone4ag0752 ATGGGTTGTGTTTATTCTCGAGTTTGCATTGGTCAAGTTTCCACTCCAAGAAATTCGAGGCTAACTCAAGCCAGAAATGCTAAAGCCGAGGCTGAAAAGAGGACAGGATTCTCTCCTTCTTCTTCCTTCGGCGAAGAAGATGACGAAAATGAAGACAGATTGAATCAGTTAAACGCAAACAGAGATTCGGAGGTAGGAATTACAAGACTCTCTAGGGTTTCATCTCAGTTCTTACCTGCTGATGGGTCTAGAACCGTCAAAATCCCTTCCGGAAACTATGAGCTTAAGTTCTCTTTTTTATCCCAAAGAGGGTATTATCCAGATGCTCTTGATAAAGCAAATCAAGACAGTTTTTGCTTTCACACCCCATTTGGAACAAACCCGGATGATCATTTCTTTGGAGTTTTTGATGGGCACGGAGAATTTGGAGCCCAATGCTCCCAATTTGTGAAGCGAAAATTATGTGAGAATTTGCTTAGGGATAATAGATTTCATTCAGATCCAGTTGAAGCTTGTCATTCATCATTTTTAGCCACAAATTCTCAGTTACATGCGGATACTTTGGACGATACCATGAGTGGGACAACTGCAATTACAGTCTTAGTTCGTGGAACGACAATTTACGTGGCTAATTCGGGTGATTCGAGGGCGGTTTTGGCTGAGAAGAGAGGGAAAGATATTATTGCTGTGGACCTTTCCATTGATCAAACCCCATTTAGGAGCGATGAGCTTGAACGGGTCAAGCTATGTGGGGCCCGGGTTCTTACATTGGATCAAATCGAAGGGTTGAAGAACCCTGAAGTGCAGTGCTGGGGCACAGAAGAAGGGGATGATGGGGACCCACCTCGGCTTTGGGTTCCCAATCGGATGTACCCTGGAACGGCCTTTACGAGGAGTATAGGGGATTCTATAGCAGAATCCATTGGTGTTGTTGCTACGCCGGAAATTGTGGTGTTGGAGCTTACACCCGATCATCCTTTCCTTGTGCTTGCTAGTGATGGAGTGTTTGAGTTTCTTTCAAGCCAAAATGTGGTTGACATGGTTGCAAAATTTAAAGATCCACGAGATGCCTGTGCTGCAATTGTAGCCGAGTCTTATAGACTTTGGCTCCAGTACGAAACCCGAACTGATGATATTACTGTCATCATCGTGCATATTAATGGGCTCACTAATAGTGTCGTGAGTGAATCAGTTAGCCTTGGTGGTGTTATACGATCACCGATACCTCAAGTTGTTGAGCTGACGGGATCGGAATCCCCTTCAACCTTAGCATGGAATCCAAGAAATTCTCGTGTGAGGCATGATTTGTCAAGAGCTCGTCTCCGTGCTATAGAAAGCTCTCTTGAGAATGGGCAACAGATATGGGTCCCTCCATCTCCGGCTCATAGGAAAACTTGGGAGGAACAAGTGCACATTGAGCAAGCGTTGCATGATCATTTCCTCTTTAAGAAACTCACTGATTCTCAGTGCCATGTTTTATTAGAGAGCATGCAAAGGGTTGAGGTTCAGCCTGGGGAAGTTGTAGTTGAACAGGGTGGTGAAGGTGACTGTTTTTATGTGGTTGGTAGTGGAGAATTTGAGGTCTTCGCAAATCAGGAAGAAAATAACAAAGAGGTTCCCCGAGTTCTACAGCGTTATACAGCTGAGAAATTATCTTCCTTCGGAGAACTTGCACTAATGTATAACAAACCACTCCAAGCATCAGTCCGAGCTGTAACACATGGAACACTTTGGGCTTTGAAAAGAGAAGACTTTCGTGGAATTCTGATGTCAGAATTTACCAATCTGTCCTCCTTGAAGTTGCTTAGATCAGTAGGTCTTCTATCAAGATTGACAATCTTGCAGCTTAGTCGAATTGCAGATGGTCTTTCCTACCTGTCTTTCTCAGATGGCCAACCTATAGTTAATAAGAGCGAACACTTGAATGCATTGTACATAATCCAAAAGGGACATGTGAGGATTACTTTTGACAGAGATTTAAGTAGTGCAAACATTATCAGCCTTAACTTTCAAGACCAGAAAGAGGAAGAGAATCCACAAAGCAGTGAAACTATTTCAGTGGTCAAAACTGAAGGAAGCTATTTCGGAGAATGGACACTTCTTGGAGAAAGTGTTGACTCCTTAAGTGCAGTTTCTGTTGGTGATGTTGTCTGTGCTTTTTTAACAAAGGAAAAATTTGAGTCGGTTGTGGGCCCCATAGCGAAGATTTCTCAAGATGATCAAAAGGTGAAGGATCAATCTTCGGACTTCCCCAAGGAATCTTCCAAGTCTGTCAATATTTCAGGTCTTACTAATGTCGAGCTAACTGACCTGGTATGGAAAACATGTATATACTCCAACGACTTAAGCGAGATCGGGCTTGTACAATTAATGAATTCAAAAAATATGCTTAGTCTAAAAAGGTTTTCAAAGCAGAAGGTGAAAAGACTAGGGAAGGAATCACAAGTGTTGAAGGAGAAGAATCTCTTGAAGAGCTTGAGCATTTCGGCTTTTGTGCCTCAATTTCTTTGCACTTGTTTGGATCAATCACATGCTGGGATATTGCTTAATACATGCCTTGCTTGTCCATTGTCTTCAATACTTCTTACTCCACTGGATGAGTCATCTGTGCGTTTCATTGCAGCCTCTCTTGTTATTGCCTTGGAAGATTTGCACAAGAATGGTATTCTCTACCGAGGAATCTCTCCGGATGGTTTAATGTTGGACCAAACTGGACACATACAGTTGGTGGACTTCATGTTTGGAAAGAAGTTATTGAATGAGCGAACGTTTACAATTTGTGGAATGGCCGACTTTTTAGCTCCAGAGATAGTCCAGGGAAAAGGCCACGGTTTTGCTGCTGACTGGTGGGCCCTTGGAGTGTTAATCTATTTCATGCTGAAAGTGGAATTGCCATTCGGATCATGGAGAGAGAGCGAGGTTGACACATTTGCCAAAATCGCAAAAGGACAGTTAAATCTTCCTCAGATCTTCAGTCCTGAAGTTATCGATCTTCTCACCAAGTTACTTGAAGTCAATGAAAATGCAAGACTCGGCGACGAGGGGTCCGGGACAGGTTTTGGGTCCATACGAAGCCATCTGTGGTTCGATGGTGTTGATTGGAAAGGGATCAAAGACTATACTTTTCCCGTTCCTAATATGATTATTTCTCGGATTTCTCAACATTTGGAAAGTTATTCTGAAGATTGTAGTGTTCCTTTAGTTAACCCTCTTCAAGATGAAGACGAAAGCATTACGGAATGGATAGATGAGTGGTAG 3258 42.82 MGCVYSRVCIGQVSTPRNSRLTQARNAKAEAEKRTGFSPSSSFGEEDDENEDRLNQLNANRDSEVGITRLSRVSSQFLPADGSRTVKIPSGNYELKFSFLSQRGYYPDALDKANQDSFCFHTPFGTNPDDHFFGVFDGHGEFGAQCSQFVKRKLCENLLRDNRFHSDPVEACHSSFLATNSQLHADTLDDTMSGTTAITVLVRGTTIYVANSGDSRAVLAEKRGKDIIAVDLSIDQTPFRSDELERVKLCGARVLTLDQIEGLKNPEVQCWGTEEGDDGDPPRLWVPNRMYPGTAFTRSIGDSIAESIGVVATPEIVVLELTPDHPFLVLASDGVFEFLSSQNVVDMVAKFKDPRDACAAIVAESYRLWLQYETRTDDITVIIVHINGLTNSVVSESVSLGGVIRSPIPQVVELTGSESPSTLAWNPRNSRVRHDLSRARLRAIESSLENGQQIWVPPSPAHRKTWEEQVHIEQALHDHFLFKKLTDSQCHVLLESMQRVEVQPGEVVVEQGGEGDCFYVVGSGEFEVFANQEENNKEVPRVLQRYTAEKLSSFGELALMYNKPLQASVRAVTHGTLWALKREDFRGILMSEFTNLSSLKLLRSVGLLSRLTILQLSRIADGLSYLSFSDGQPIVNKSEHLNALYIIQKGHVRITFDRDLSSANIISLNFQDQKEEENPQSSETISVVKTEGSYFGEWTLLGESVDSLSAVSVGDVVCAFLTKEKFESVVGPIAKISQDDQKVKDQSSDFPKESSKSVNISGLTNVELTDLVWKTCIYSNDLSEIGLVQLMNSKNMLSLKRFSKQKVKRLGKESQVLKEKNLLKSLSISAFVPQFLCTCLDQSHAGILLNTCLACPLSSILLTPLDESSVRFIAASLVIALEDLHKNGILYRGISPDGLMLDQTGHIQLVDFMFGKKLLNERTFTICGMADFLAPEIVQGKGHGFAADWWALGVLIYFMLKVELPFGSWRESEVDTFAKIAKGQLNLPQIFSPEVIDLLTKLLEVNENARLGDEGSGTGFGSIRSHLWFDGVDWKGIKDYTFPVPNMIISRISQHLESYSEDCSVPLVNPLQDEDESITEWIDEW 1085
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 4192648 4200942 + Conep04aG0078400.1 Cone4ag0752 435730
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone4ag0752 1085 PANTHER CYCLIC NUCLEOTIDE-DEPENDENT PROTEIN KINASE 353 1048 - GO:0004691(PANTHER)|GO:0005952(PANTHER)|GO:0007165(PANTHER)|GO:0018105(PANTHER)
Cone4ag0752 1085 CDD PP2Cc 112 386 IPR001932 -
Cone4ag0752 1085 Gene3D Jelly Rolls 456 596 IPR014710 -
Cone4ag0752 1085 FunFam Phosphatase 2C and cyclic nucleotide-binding/kinase domain-containing protein 91 388 - -
Cone4ag0752 1085 Gene3D - 91 387 IPR036457 -
Cone4ag0752 1085 SMART cnmp_10 481 605 IPR000595 -
Cone4ag0752 1085 SMART cnmp_10 607 745 IPR000595 -
Cone4ag0752 1085 Pfam Protein kinase domain 792 1020 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone4ag0752 1085 SUPERFAMILY PP2C-like 86 388 IPR036457 -
Cone4ag0752 1085 ProSiteProfiles cAMP/cGMP binding motif profile. 481 590 IPR000595 -
Cone4ag0752 1085 Gene3D Transferase(Phosphotransferase) domain 1 856 1043 - -
Cone4ag0752 1085 SUPERFAMILY cAMP-binding domain-like 461 591 IPR018490 -
Cone4ag0752 1085 SUPERFAMILY Protein kinase-like (PK-like) 781 1060 IPR011009 -
Cone4ag0752 1085 SUPERFAMILY cAMP-binding domain-like 599 732 IPR018490 -
Cone4ag0752 1085 CDD CAP_ED 607 732 IPR000595 -
Cone4ag0752 1085 PRINTS cAMP-dependent protein kinase signature 726 738 - -
Cone4ag0752 1085 PRINTS cAMP-dependent protein kinase signature 517 531 - -
Cone4ag0752 1085 PRINTS cAMP-dependent protein kinase signature 502 516 - -
Cone4ag0752 1085 PRINTS cAMP-dependent protein kinase signature 552 561 - -
Cone4ag0752 1085 ProSiteProfiles Protein kinase domain profile. 771 1029 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone4ag0752 1085 SMART serkin_6 779 1029 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone4ag0752 1085 ProSitePatterns PPM-type phosphatase domain signature. 132 140 IPR000222 GO:0043169(InterPro)
Cone4ag0752 1085 Pfam Cyclic nucleotide-binding domain 627 729 IPR000595 -
Cone4ag0752 1085 Pfam Cyclic nucleotide-binding domain 500 591 IPR000595 -
Cone4ag0752 1085 ProSiteProfiles PPM-type phosphatase domain profile. 96 386 IPR001932 -
Cone4ag0752 1085 Pfam Protein phosphatase 2C 122 364 IPR001932 -
Cone4ag0752 1085 CDD CAP_ED 481 590 IPR000595 -
Cone4ag0752 1085 SMART PP2C_4 96 384 IPR001932 -
Cone4ag0752 1085 FunFam Protein phosphatase 2C and cyclic nucleotide-binding/kinase domain-containing protein 455 595 - -
Cone4ag0752 1085 Gene3D Phosphorylase Kinase; domain 1 781 855 - -
Cone4ag0752 1085 ProSiteProfiles cAMP/cGMP binding motif profile. 607 732 IPR000595 -
Cone4ag0752 1085 MobiDBLite consensus disorder prediction 19 52 - -
Cone4ag0752 1085 Gene3D Jelly Rolls 597 749 IPR014710 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone14ag0804 Cone-Chr14:4760126 Cone4ag0752 Cone-Chr4:4192648 3.07E-131 dispersed
Cone15ag0805 Cone-Chr15:4938604 Cone4ag0752 Cone-Chr4:4192648 2.40E-132 dispersed
Cone4ag0190 Cone-Chr4:891397 Cone4ag0752 Cone-Chr4:4192648 2.25E-120 dispersed
Cone4ag0752 Cone-Chr4:4192648 Cone4ag1650 Cone-Chr4:12437128 3.56E-31 dispersed
Cone4ag0752 Cone-Chr4:4192648 Cone7ag0702 Cone-Chr7:4021963 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
82752 PF00012 HSP70 2.50E-11 CL0108 Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone4ag0752 - - - 0.0