Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone4ag0762 ATGGGCAGAGCAACAAGGTGGCTGAAGAGCTTATTTGGGATAAGGAAAGACAAGGACCACAGGAAAAATTCAAACTCCAGTGGTCTCTGCCACAACCCGGCGACCATACCGCCTAATATATCAGCAGCCGAAGCTGCCTGGATTAGGTCCTACTACTCAGAAACAGAGAAGGAACAGAGCAAGCATGCGATAGCAGTAGCTGCAGCCACAGCCGCGGCGGCGGACGCTGCGGTTGCAGCCGCGCAAGCGGCTGTGGAAGTAGTGAGACTCACTAGTCACGGCAGAGGCACGCTGTTCGGTGGTGGCCGTGAAAGATGGGCTGCGGTGAAGATTCAAACTCTGTTCAGAGGTTATCTTGCTAGAAAAGCTCTGAGAGCACTAAAAGGATTAGTGAAAATACAAGCACTTGTTAGAGGGTATTTAGTGAGAAAGCAAGCAACAGCAACTCTTCACAGTATGCAAGCTTTGATTAGAGTTCAAGCAAGTGTTCGTTCTCAACGGGCTCGTAAGATTTTCGAGAACGAAATCAACATTAGAACTGATATCCAAGCCAGAAAATCCATGGAGAGATTTGATGATACAAAAAGTGAACACACAGCTTCTTCATTACACAGCAGAAGACTCTCTGCTTCACTTGACACAATAACCACAACAACCACAGCCGCAACAATTAACCCTTTTGACGAAAGCCCGAAAATCGTGGAAGTTGATACAGGTACTAGGCCTAAATCACGGTCCCGTAGGACAACAAACGCTTCACTTTCTGATTTTAGTGACGATCCATATAGCCAATTTCACCAAGCTATATCGTCTCCACTCCCATGTCGAACCCCATCTCGATTATCAATCCCAAATTTCCGGAATTTCCAAGATTCTGATCGGGGCGTACTTGGAGAAGAATATAGATTCTCTACCGCGCAAAGTACACCTAGATTGGCCCCAGCTATTACTCCTTCAAAGAGCCTCTGCGGGGACAATGTTTTTAGAGGGTACATGAATTTTCCGAACTATATGGCAGATACTCAATCTTTTAAGGCGAAATTGAGATCTCATAGTGCACCTAAACAGCGGCCAGAGCCGGGGATAAAGAAAAGGCTTTCGCTTAATGAATTGATGGAGTCTAGAAGTAGTTTCAGTGGGGTCAGGATGCAAAGGTCTTGTTCACAAGTGCAAGAAACTATTAGTTGCAAGAATGCTGTGATGGGTGAGATTCAGAAACCCTCCGAGTATTTGAGGAACCTAGAGAGGAGAGACAGTTACAGAGGACTTGGATGA 1275 46.04 MGRATRWLKSLFGIRKDKDHRKNSNSSGLCHNPATIPPNISAAEAAWIRSYYSETEKEQSKHAIAVAAATAAAADAAVAAAQAAVEVVRLTSHGRGTLFGGGRERWAAVKIQTLFRGYLARKALRALKGLVKIQALVRGYLVRKQATATLHSMQALIRVQASVRSQRARKIFENEINIRTDIQARKSMERFDDTKSEHTASSLHSRRLSASLDTITTTTTAATINPFDESPKIVEVDTGTRPKSRSRRTTNASLSDFSDDPYSQFHQAISSPLPCRTPSRLSIPNFRNFQDSDRGVLGEEYRFSTAQSTPRLAPAITPSKSLCGDNVFRGYMNFPNYMADTQSFKAKLRSHSAPKQRPEPGIKKRLSLNELMESRSSFSGVRMQRSCSQVQETISCKNAVMGEIQKPSEYLRNLERRDSYRGLG 424
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 4286824 4288795 - Conep04aG0079400.1 Cone4ag0762 435740
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone4ag0762 424 Pfam Protein of unknown function (DUF4005) 306 380 IPR025064 -
Cone4ag0762 424 SMART iq_5 126 147 IPR000048 GO:0005515(InterPro)
Cone4ag0762 424 SMART iq_5 103 125 IPR000048 GO:0005515(InterPro)
Cone4ag0762 424 SMART iq_5 151 173 IPR000048 GO:0005515(InterPro)
Cone4ag0762 424 ProSiteProfiles IQ motif profile. 128 155 - -
Cone4ag0762 424 Pfam IQ calmodulin-binding motif 105 125 IPR000048 GO:0005515(InterPro)
Cone4ag0762 424 Pfam IQ calmodulin-binding motif 131 145 IPR000048 GO:0005515(InterPro)
Cone4ag0762 424 MobiDBLite consensus disorder prediction 232 257 - -
Cone4ag0762 424 ProSiteProfiles IQ motif profile. 152 181 - -
Cone4ag0762 424 Gene3D - 130 179 - -
Cone4ag0762 424 Gene3D - 46 129 - -
Cone4ag0762 424 ProSiteProfiles IQ motif profile. 104 132 - -
Cone4ag0762 424 PANTHER IQ-DOMAIN 5-RELATED 6 385 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone16ag0724 Cone-Chr16:8405448 Cone4ag0762 Cone-Chr4:4286824 1.51E-70 dispersed
Cone2ag0310 Cone-Chr2:1597924 Cone4ag0762 Cone-Chr4:4286824 2.80E-70 dispersed
Cone4ag0762 Cone-Chr4:4286824 Cone6ag0754 Cone-Chr6:3835983 2.90E-21 dispersed
Cone17ag0129 Cone-Chr17:665970 Cone4ag0762 Cone-Chr4:4286824 3.38E-75 wgd
Cone20ag1278 Cone-Chr20:8347404 Cone4ag0762 Cone-Chr4:4286824 1.91E-82 wgd
Cone4ag0762 Cone-Chr4:4286824 Cone7ag0718 Cone-Chr7:4218271 2.12E-235 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone4ag0762 - - - 0.0