Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone4ag0772 | ATGACGGATCCTCTCCTAATCAACTCCGAGACCGAGCCGAGCACCACAACTAACTCCTCCTCCTCCTCCTCCTCCTTACCTTCTTCATCTGGATCATCCTTACTAAACCCAATAGCACTAAAACAAACTCGGCCAACCGGCCCAGCGCAGAAGAAACGCCTCAAGAAGCGAACCCGAGATCATGACATCCCCAGAAACGACGCCACCAAGCACCCAGTTTACCGGGGGATCCGAATGCGGGCGTGGGGCAAATGGGTGTCTGAAATTCGCGAGCCAAGAAAGAAAAATCGGATATGGCTAGGTACTTTCTCAACTGCCGAGATGGCTGCCCGGGCCCACGACGTAGCCGCCTTGAGCATCAAAGGCAACTCAGCCATCCTAAACTTCCCTGAACTCGCCGATTCTCTTCCTAGGCCTGCCTCAAAATCTCCTCGAGACGTTCAAGCTGCCGCTGCTAAAGCCGCTTCGATGGTGGTCACTACTTCCGATATTGTCAAGCATTCAATGGTGTCTACATCCTCTACATCATCATTGTCGCAGGATTCATCAGTAGGGTTGGCGCCGGAGGAGCTGAGTGAGATAGTGGAGCTGCCGAGTTTGGCCGGGGCAAGTTATGACTCGCCTGAGTGGCCTAATGAGTTAGTGTTTACGGACTCAGTAGTGGAGGAATGGCTCTGTCCTCATCCCTGGTATCATCAGTGCAATAGCATTAATGGCGATGAGAGTTATGGCCATTTTAGGGATCACATTACAGCAGGGACATTTGAGGCCTTTTTATGGCAACATTAA | 789 | 51.71 | MTDPLLINSETEPSTTTNSSSSSSSLPSSSGSSLLNPIALKQTRPTGPAQKKRLKKRTRDHDIPRNDATKHPVYRGIRMRAWGKWVSEIREPRKKNRIWLGTFSTAEMAARAHDVAALSIKGNSAILNFPELADSLPRPASKSPRDVQAAAAKAASMVVTTSDIVKHSMVSTSSTSSLSQDSSVGLAPEELSEIVELPSLAGASYDSPEWPNELVFTDSVVEEWLCPHPWYHQCNSINGDESYGHFRDHITAGTFEAFLWQH | 262 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 4457176 | 4457964 | - | Conep04aG0080400.1 | Cone4ag0772 | 435750 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone4ag0772 | 262 | PRINTS | Ethylene responsive element binding protein signature | 96 | 112 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cone4ag0772 | 262 | PRINTS | Ethylene responsive element binding protein signature | 74 | 85 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cone4ag0772 | 262 | SUPERFAMILY | DNA-binding domain | 73 | 131 | IPR016177 | GO:0003677(InterPro) | |
Cone4ag0772 | 262 | Pfam | AP2 domain | 72 | 122 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cone4ag0772 | 262 | ProSiteProfiles | AP2/ERF domain profile. | 73 | 130 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cone4ag0772 | 262 | CDD | AP2 | 74 | 132 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cone4ag0772 | 262 | Gene3D | AP2/ERF domain | 73 | 131 | IPR036955 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cone4ag0772 | 262 | PANTHER | ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED | 30 | 207 | IPR051032 | - | |
Cone4ag0772 | 262 | SMART | rav1_2 | 73 | 136 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cone4ag0772 | 262 | MobiDBLite | consensus disorder prediction | 1 | 40 | - | - | |
Cone4ag0772 | 262 | MobiDBLite | consensus disorder prediction | 1 | 72 | - | - | |
Cone4ag0772 | 262 | FunFam | Ethylene-responsive transcription factor 2 | 72 | 131 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone17ag1123 | Cone-Chr17:8317270 | Cone4ag0772 | Cone-Chr4:4457176 | 4.27E-53 | dispersed | |
Cone4ag0772 | Cone-Chr4:4457176 | Cone7ag0894 | Cone-Chr7:6995942 | 7.48E-43 | dispersed | |
Cone7ag1544 | Cone-Chr7:10651766 | Cone4ag0772 | Cone-Chr4:4457176 | 4.36E-20 | dispersed | |
Cone17ag0153 | Cone-Chr17:766808 | Cone4ag0772 | Cone-Chr4:4457176 | 6.04E-53 | wgd | |
Cone4ag0772 | Cone-Chr4:4457176 | Cone4ag0949 | Cone-Chr4:8070103 | 1.91E-63 | wgd | |
Cone4ag0772 | Cone-Chr4:4457176 | Cone7ag1181 | Cone-Chr7:8804049 | 1.27E-63 | wgd | |
Cone4ag0772 | Cone-Chr4:4457176 | Cone7ag0709 | Cone-Chr7:4093784 | 4.34E-152 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
45945 | PF00443 | UCH | 6.90E-51 | CL0125 | Cone | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone4ag0772 | K09286 | - | csv:101219745 | 224.557 |