Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone4ag0787 ATGAAGGAGGAGGATTTTAAGGAGAAGAAGGGTGATTCAGAATGTGGGGGTAAAATGGTGATAGTTGTAGTCAAGGCTTCATCAAGAGGAGTACCAAGAAGTGCTCTGGTTTGGGCTTTGAATCATATTGTTCAACCTGGTGATTGCATTAAGCTCTTGGTTCTTATTCCTTCTCACCCTTCTTCAAGTACATGGATTAAGGGATTTACTGTTTTTACCCGAGATTGCACCCCCACTCACCCAAGCACTCTATCTGGGACCTTGGCTGATCAGAAGGATGATATCGAACATACATCCTCTCAAATGGTGCTTCAACTCCATGACCTTTATGATCCTCAAAAGGTAAAAGTTAGAATTAAAGTCGTTCCACGCTCACAACAGGGCGTTGTGGCTTCTGAAGTCAAGAAAGCTCAATCAAACTGGGTGATTTTCGACAAAGATTTGAAACACGAAAGGAAACACTGCATGGCAGAGCTTCAATGCAATGTAGTGGTCATGAAAAGATCTCAGGCAAAGGTTCTCCGTCTAAATCTGGTCAATAATAATAATGATAATCAACTGAAAAAAATGGGAACTCAAGTGGGTTCATTGTTATCGACTTCAGAATCAGAAAAGGCTTTTCCGAAGTGCCTTAGAACGTACTTTGAGGAATCAACAATTATTGCTAAAGGTCCAGTTGTTACTCCAGCAAGTAGTCCAGACCAAGAGTCTCCTCTTACCGTAACTGATCTCGGAGCATCATCAATATCAAGCTCTGACATGGGGACTTCCTCTTTGGTTTCCGGATCATTCCCCGGTCGGAAAGAAGATTTTGGAACCCAGAATTCCCCCGAATCTGATTCTGATAGAGTTAGTGATAAAAAACCTTGTCCATCTACCAAAACATCGTATTTCCTTAAATGGATGGCAGATAGTATTAGTAGCTCTAGAGTTGACTTGTCGAAAAATCTGTATAGACCTTCAAAACTAGGTCTAGAACCTCAAAATGTTGATTTGGGCTTAAGCCGAAAGGTTAGGGAGACAATTTCATTGTCCCAAAAAGCACCTCTCGGGCCTCCTCCATTGTGTTCGATTTGTCAGCATAAAGCCCCCGTATTTGGAAATCCTCCAAGATGGTTCACTTACTCCGAACTAGAACTGGCTACAGGTGGATTTTCGGGAGCAAATTTCTTGGCTGAAGGCGGGTTCGGTTCTGTACACCGAGGAGTTTTACTGAACGGTCAAGTTGTTGCCGTCAAGCAGTATAAGCTTGCTAGCTCCCAGGGCGATCGGGAATTTTGCTCAGAAGTCGAGGTGTTAAGCTGTGCACAGCATCGTAACGTGGTGATGTTGATTGGTTTTTGCGTGGAGGCCGGAAAAAGGTTGTTGGTTTATGAATATATTTGCAATGGGTCCCTCCATTCTCATCTTTATGGGAAAAATAATGGTGATGCGTTGGAATGGACGGCTCGGCAGAAGATTGCAGTTGGAGCGACACGAGGGTTGAGGTATCTTCATGAAGAATGTAGAGTGGGGTGTATTGTTCACCGTGATATGCGGCCTAACAATATTCTTCTTACCCATGATTTCGAACCATTAGTTGGAGATTTTGGGCTGGCAAGGTGGCAGCCGGATGGAGACATGGGAGTGGAAACCCGAATTCTTGGAACATTCGGGTACTTGGCTCCAGAATATGCTCAGAGCGGCCAAATCACAGAAAAGGCCGATGTATATTCATTTGGTGTAGTATTGCTCGAACTTGTAACCGGACGAAAAGCTATAGACATAAATCGTCCCAAAGGTCAACAATGCCTTACTGAATGGGCAAGGACTTTGCTTAGAAAAGGTTCAATTGCGGAATTGGTCGATCCACGGTTAGGAAACTGCTATTCGGTTGAAGAGGTTCATCGGATGCTACGTTGTGCGTCCTTGTGCATCAAGCAAGACCCTTATTCCAGGCCTCGTATGTCTCAGGTGCTTCGGATATTGGAGGGAGACATTGCCATGTAA 1989 44.09 MKEEDFKEKKGDSECGGKMVIVVVKASSRGVPRSALVWALNHIVQPGDCIKLLVLIPSHPSSSTWIKGFTVFTRDCTPTHPSTLSGTLADQKDDIEHTSSQMVLQLHDLYDPQKVKVRIKVVPRSQQGVVASEVKKAQSNWVIFDKDLKHERKHCMAELQCNVVVMKRSQAKVLRLNLVNNNNDNQLKKMGTQVGSLLSTSESEKAFPKCLRTYFEESTIIAKGPVVTPASSPDQESPLTVTDLGASSISSSDMGTSSLVSGSFPGRKEDFGTQNSPESDSDRVSDKKPCPSTKTSYFLKWMADSISSSRVDLSKNLYRPSKLGLEPQNVDLGLSRKVRETISLSQKAPLGPPPLCSICQHKAPVFGNPPRWFTYSELELATGGFSGANFLAEGGFGSVHRGVLLNGQVVAVKQYKLASSQGDREFCSEVEVLSCAQHRNVVMLIGFCVEAGKRLLVYEYICNGSLHSHLYGKNNGDALEWTARQKIAVGATRGLRYLHEECRVGCIVHRDMRPNNILLTHDFEPLVGDFGLARWQPDGDMGVETRILGTFGYLAPEYAQSGQITEKADVYSFGVVLLELVTGRKAIDINRPKGQQCLTEWARTLLRKGSIAELVDPRLGNCYSVEEVHRMLRCASLCIKQDPYSRPRMSQVLRILEGDIAM 662
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 4700713 4704609 + Conep04aG0081900.1 Cone4ag0787 435765
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone4ag0787 662 MobiDBLite consensus disorder prediction 230 272 - -
Cone4ag0787 662 Pfam Protein kinase domain 391 653 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone4ag0787 662 MobiDBLite consensus disorder prediction 273 289 - -
Cone4ag0787 662 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 461 662 - -
Cone4ag0787 662 Gene3D Transferase(Phosphotransferase) domain 1 461 661 - -
Cone4ag0787 662 MobiDBLite consensus disorder prediction 226 290 - -
Cone4ag0787 662 ProSiteProfiles Protein kinase domain profile. 385 662 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone4ag0787 662 ProSitePatterns Tyrosine protein kinases specific active-site signature. 507 519 IPR008266 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone4ag0787 662 CDD STKc_IRAK 391 658 - -
Cone4ag0787 662 PANTHER OS01G0750732 PROTEIN 150 659 IPR050885 -
Cone4ag0787 662 Gene3D Phosphorylase Kinase; domain 1 357 460 - -
Cone4ag0787 662 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 357 460 - -
Cone4ag0787 662 SUPERFAMILY Protein kinase-like (PK-like) 365 656 IPR011009 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone17ag0111 Cone-Chr17:581592 Cone4ag0787 Cone-Chr4:4700713 5.12E-267 dispersed
Cone4ag0787 Cone-Chr4:4700713 Cone4ag1878 Cone-Chr4:13429540 2.84E-153 dispersed
Cone16ag0743 Cone-Chr16:8484471 Cone4ag0787 Cone-Chr4:4700713 7.34E-92 wgd
Cone20ag1297 Cone-Chr20:8447839 Cone4ag0787 Cone-Chr4:4700713 3.66E-267 wgd
Cone4ag0787 Cone-Chr4:4700713 Cone4ag0931 Cone-Chr4:7749425 7.18E-246 wgd
Cone4ag0787 Cone-Chr4:4700713 Cone7ag0733 Cone-Chr7:4436877 0 wgd
Cone4ag0787 Cone-Chr4:4700713 Cone7ag1209 Cone-Chr7:8992308 5.39E-252 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
82754 PF00704 Glyco_hydro_18 6.70E-50 CL0058 Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone4ag0787 - - - 0.0