Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cone4ag0805 | ATGGCTGCACCAGTAAACATCGTTGTTGGTTCTCATGTCTGGGTTGAAGATCCAGTGCTTGCATGGATTGATGGAGAAGTCTCCCGGATTAATGGGGAAGAAATTCATGTTCATGCCACAAATGGAAAAACAGTTGTTACAAAGATCTCAAATGTGTTTCCCAAGGATACTGAAGCACCTCCTGGAGGTGAAGATGACATGACAAAGCTATCATATTTGCATGAACCGGGAGTTCTCCATAACTTGGCAACAAGATATGAACTCAATGAAATCTATACTTATACCGGTAATATATTGATTGCGATAAATCCATTTCAAAGATTACCTCACCTGTATGATACTCATATGATGGAGCAATACAAAGGAGCTGGATTAGGAGAGTTAAGCCCTCATGTTTTTGCAGTTGCCGATGTTGCATACAGGGCAATGATCAATGAGGGAAAGAGCAATTCGATTCTAGTAAGTGGAGAGAGTGGTGCTGGTAAGACCGAGACCACAAAAATGCTTATGCGATATCTTGCTTACCTTGGAGGTCGATCAGGAGTAGAAGGACGGACAGTTGAACAGCAAGTTCTAGAATCCAATCCAGTTCTTGAAGCATTCGGCAATGCAAAAACTGTTAGGAATAATAATTCGAGTCGCTTTGGTAAATTTGTTGAGATCCAATTTGACAAGAATGGAAGGATATCCGGTGCTGCTATTCGAACTTATTTGCTTGAGAGATCACGAGTTTGTCAAATTTCGAGTCCTGAAAGAAATTACCATTGCTTCTACCTTCTTTGTGCTGCTCCACCAGAGGAAAGAGAGAAGTATAAGTTGGGAGACCCTAAGTCATTCCATTACTTAAATCAATCCAACTGCTATGAGCTGGATGGAGTAAACGATGCCCATGAATATCTTGCTACCAAAAGGGCTATGGATATAGTCGGAATCAGTGAGGAAGAGCAGGAGGCAATTTTTAGGGTTGTAGCTGCCATTTTGCATCTTGGAAATATTGAATTTGCAAAAGGAAAGGAGATTGACTCTTCTGTCATTAAGGATGAGAAGTCTAGATTCCATCTTAATATGACAGCTGAGCTGCTCAAGTGCGATGCAAAGAGCTTGGAAGATGCATTGATTAAACGTGTCATGGTAACTCCAGAAGAAATTATTACTAGAACCCTGGATCCTGAGGCTGCATTGGGTAGCAGGGATGCCTTGGCTAAAACTGTTTATTCTCGGTTGTTTGATTGGCTTGTAGATAAAATTAACAATTCAATTGGACAAGACCCCAATTCAAAATCATTAATTGGAGTTCTTGATATTTATGGTTTTGAGAGTTTTAAGCTGAACAGTTTTGAGCAGTTTTGTATCAATTTTACGAATGAAAAACTGCAACAACATTTTAATCAGCACGTCTTCAAAATGGAACAAGAGGAATATACAAAAGAAGAAATCAATTGGAGCTACATAGAGTTTGTTGACAACCAGGACGTATTGGATCTGATTGAAAAGAAACCTGGAGGAATTATTGCACTCTTGGATGAGGCATGTATGTTTCCCAAGTCCACACATGAGACATTTGCTCAAAAGCTATACCAGACATTCAAAAACAACAAGCGTTTTATCAAACCTAAATTGTCTAGAACAACTTTTACCATATCTCATTATGCTGGAGAGGTAACTTATCTGGCCGATTTGTTTCTTGATAAAAACAAAGACTATGTGGTTGCAGAACATCAGAGTCTGATGACAGCCTCAAGCTGTCCCTTTATGGCTGCTTTATTTCCTGTTCTACCTGAGGAAACATCAAAGTCGTCCAAATTTTCCTCCATTGGTTCACGTTTTAAGACGCAACTTCAGTCACTGATGGAAACCTTAAACTCAACAGAACCTCACTACATCAGATGCGTGAAGCCAAATAATGTGCTCAAGCCTGCTATTTTTGAGAACTTGAACATAATCCAACAGTTACGCTGTGGAGGTGTTCTTGAAGCAATTAGGATCAGCTGTGCTGGATATCCTACCCGACGTACATTTTATGAGTTCCTTCTCCGCTTCGGAGTTCTTGCTCCAGAAATTTTGGATGGGAACTATGATGACAAGGTGGCATGCCAGAAGATCCTGGATAAAATGGGACTGAAAGGTTATCAGATAGGCAAGACAAAGGTCTTTCTCAGGGCTGGTCAAATGGCATCACTGGATGCAAAAAGAACAGAGGTGCTTGGGAATGCTGCTAGAACCATTCAATGGAAAGTTCGTACATATGTTGCACGAAAGGAGTTCGTGGCATTACGTCAAGCTGCTATACAACTGCAATCTTTTTCCAGAGGCATCTTGGCTCGTAAGCGTTTTGAGGAGTTGCGTCGGGAAGCGTCAGCTTTGAGGATCCAAAAAATGTTCAGACAACATACTGCCAGGAAATCTTACTTGTCTTTACTGTCATCAGCAATCACTTTGCAAAGAGGGTTGAGAGCAATGACTGCACGGAATGAATTCAGATTCAAAAAGCATACGAAAGCTGCGATTCTTATACAGGCTCATTTGCGTGGGCACATAACATATTCTTATTACAAGAGGCTCCAGAAGGCTGCATTAATCACACAATGCAGTTGGAGAGGAAGAGTGGCTCGCAGAGAGCTTAGACAGCTTAAAATGGCTGCGAGGGAAACAGGGGCCCTTAAAGAAGCAAAAGACAAGTTAGAAAAGCGTGTGGAAGAACTTACTTGGCGCTTACAACTTGAGAAAAGAATGAGGACTGATCTGGAAGAGGAAAAATCCCAAGAAATCGCTAAGTTACAGGACGCTTTGCATGCGATGCATGTTCAAGTTGAAGAAGCAAATGCTCAGGTAATAAAAGAACGAGAGGTAGCTCGAAAAGCTATTGAAGAGGCACCTCCAGTTGTCAAGGAAACTCCTGTTATAGTTGAGGACACAGAAAAGATCAATTCCTTAGTGGCTGCGGTAGATAATTTAAAGGCTTTGCTGTTATCAGAAAAAACAGCAGCAGAAGAAGCCAGAAAGGCATGTACAGATGCTGAGGGTAGAATCGCAGAGTTGGCTGGAAAACTTGAATCGGCAGAACAAAAAGCAGACCAGCTTCAGGAATCTGTGCAGAGGCTAGAAGAGAAGCTTTCAAATTCAGAGTCGGAAAATCAAGTACTTCGCCAGCAAGCACTGAGCATATCACCAACTGCGAAGACATTATCTGCAAGACCAAAGTCAATGATTATTCAGAGGACACCAGAGAATGGAAACATTCTACCTGGAGAGGCTAAGATTTCATCAGACACAACTCTTGCGCTATCAAATCCACGTGAACCTGAATCAGAGGAAAAACCACAGAAATCTCTTAATGAGAAGCAGCAGGAGAACCAGGACCTTCTTGTCAAGTGCGTATCGCAAGATCTAGGATTCACTAGGGGCAGACCTATCGCTGCTTGTGTCATATATAAATGTCTTCTTCACTGGCGGTCCTTTGAGGTTGAAAGAACTAGTGTTTTTGACCGGATCATTCAAACAATAGCTTCGGCAATAGAGGCCCCAGATAACAATGATGTGCTGGCTTATTGGTTGTCTAATACATCTACTTTGCTCTTACTGCTCCAACACACCCTCAAAGCAAGTGGAGCTGCTAGCTTGACCCCACAAAGACGTAGGACAACATCAGCTTCTCTTTTCGGAAGAATGTCTCAGGGATTAAGGGTATCTCCTCAGAGTGCTGGACTCCCATTTCTTAATAGCCGAGGAATTGGAAGACTTGATGATTTCCGGCAGGTCGAGGCCAAGTATCCAGCTCTCCTGTTTAAGCAACAGCTCACTGCTTTTCTAGAGAAAATATATGGAATGATAAGAGACAATTTGAAGAAAGAGATCTCACCATTGCTAGGATTATGTATCCAGGCACCCAGGACATCACGGGCAAATTTAGTGAAAGGGCGTGCCCAAGCTAATGCTGTTGCTCAGCAAGCTCTTATTGCTCATTGGCAAAGCATTGTCAAAAGCTTGAACAATTACTTGAAAATGATGAAAGCAAACTTTGTGCCACCATTCTTAGTCCGTAAAGTGTTCACTCAAATATTCTCCTTCATCAATGTCCAGTTATTCAACAGCCTTCTTTTGCGACGTGAATGTTGTTCATTTAGTAACGGAGAATACGTGAAAGCAGGTTTGGCTGAATTAGAACAGTGGTGCATTGAGGTGACAGAGGAATATGCAGGAGTTGCCTGGGATGAATTGAAACATATCAGACAGGCTGTTGGATTCCTAGTCATACATCAGAAACCGAAAAAGAACTTGCATGAAATAACAAAAGAACTTTGCCCTGTGCTTAGCATACAGCAATTGTATAGAATCAGTACGATGTACTGGGACGACAAATATGGCACACACAGTGTATCTTCGGAAGTCATATCAAGCATGAGAGTTATGATGACTGAAGACTCGAACAATGCTGTTAGCAGTTCTTTCCTACTAGACGATGATTCCAGCATTCCCTTTTCTGTGGATGACATTTCCAAGTCAATGCAACAAGTAGATATGGCTGATATTGATCCGCCACCTCTTATTCGGGAAAATTCAGGTTTTGGGTTCTTACTTCAGCGCTCGGAATGA | 4593 | 41.74 | MAAPVNIVVGSHVWVEDPVLAWIDGEVSRINGEEIHVHATNGKTVVTKISNVFPKDTEAPPGGEDDMTKLSYLHEPGVLHNLATRYELNEIYTYTGNILIAINPFQRLPHLYDTHMMEQYKGAGLGELSPHVFAVADVAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGVEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKNGRISGAAIRTYLLERSRVCQISSPERNYHCFYLLCAAPPEEREKYKLGDPKSFHYLNQSNCYELDGVNDAHEYLATKRAMDIVGISEEEQEAIFRVVAAILHLGNIEFAKGKEIDSSVIKDEKSRFHLNMTAELLKCDAKSLEDALIKRVMVTPEEIITRTLDPEAALGSRDALAKTVYSRLFDWLVDKINNSIGQDPNSKSLIGVLDIYGFESFKLNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTKEEINWSYIEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFAQKLYQTFKNNKRFIKPKLSRTTFTISHYAGEVTYLADLFLDKNKDYVVAEHQSLMTASSCPFMAALFPVLPEETSKSSKFSSIGSRFKTQLQSLMETLNSTEPHYIRCVKPNNVLKPAIFENLNIIQQLRCGGVLEAIRISCAGYPTRRTFYEFLLRFGVLAPEILDGNYDDKVACQKILDKMGLKGYQIGKTKVFLRAGQMASLDAKRTEVLGNAARTIQWKVRTYVARKEFVALRQAAIQLQSFSRGILARKRFEELRREASALRIQKMFRQHTARKSYLSLLSSAITLQRGLRAMTARNEFRFKKHTKAAILIQAHLRGHITYSYYKRLQKAALITQCSWRGRVARRELRQLKMAARETGALKEAKDKLEKRVEELTWRLQLEKRMRTDLEEEKSQEIAKLQDALHAMHVQVEEANAQVIKEREVARKAIEEAPPVVKETPVIVEDTEKINSLVAAVDNLKALLLSEKTAAEEARKACTDAEGRIAELAGKLESAEQKADQLQESVQRLEEKLSNSESENQVLRQQALSISPTAKTLSARPKSMIIQRTPENGNILPGEAKISSDTTLALSNPREPESEEKPQKSLNEKQQENQDLLVKCVSQDLGFTRGRPIAACVIYKCLLHWRSFEVERTSVFDRIIQTIASAIEAPDNNDVLAYWLSNTSTLLLLLQHTLKASGAASLTPQRRRTTSASLFGRMSQGLRVSPQSAGLPFLNSRGIGRLDDFRQVEAKYPALLFKQQLTAFLEKIYGMIRDNLKKEISPLLGLCIQAPRTSRANLVKGRAQANAVAQQALIAHWQSIVKSLNNYLKMMKANFVPPFLVRKVFTQIFSFINVQLFNSLLLRRECCSFSNGEYVKAGLAELEQWCIEVTEEYAGVAWDELKHIRQAVGFLVIHQKPKKNLHEITKELCPVLSIQQLYRISTMYWDDKYGTHSVSSEVISSMRVMMTEDSNNAVSSSFLLDDDSSIPFSVDDISKSMQQVDMADIDPPPLIRENSGFGFLLQRSE | 1530 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 4 | 5072247 | 5086500 | + | Conep04aG0083800.1 | Cone4ag0805 | 435783 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cone4ag0805 | 1530 | ProSiteProfiles | IQ motif profile. | 831 | 857 | - | - | |
| Cone4ag0805 | 1530 | Pfam | IQ calmodulin-binding motif | 737 | 755 | IPR000048 | GO:0005515(InterPro) | |
| Cone4ag0805 | 1530 | Pfam | IQ calmodulin-binding motif | 785 | 803 | IPR000048 | GO:0005515(InterPro) | |
| Cone4ag0805 | 1530 | Pfam | IQ calmodulin-binding motif | 759 | 778 | IPR000048 | GO:0005515(InterPro) | |
| Cone4ag0805 | 1530 | Pfam | IQ calmodulin-binding motif | 856 | 875 | IPR000048 | GO:0005515(InterPro) | |
| Cone4ag0805 | 1530 | Pfam | IQ calmodulin-binding motif | 832 | 852 | IPR000048 | GO:0005515(InterPro) | |
| Cone4ag0805 | 1530 | Pfam | IQ calmodulin-binding motif | 808 | 827 | IPR000048 | GO:0005515(InterPro) | |
| Cone4ag0805 | 1530 | MobiDBLite | consensus disorder prediction | 1058 | 1075 | - | - | |
| Cone4ag0805 | 1530 | Coils | Coil | 877 | 918 | - | - | |
| Cone4ag0805 | 1530 | PRINTS | Myosin heavy chain signature | 92 | 111 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Cone4ag0805 | 1530 | PRINTS | Myosin heavy chain signature | 482 | 510 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Cone4ag0805 | 1530 | PRINTS | Myosin heavy chain signature | 149 | 174 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Cone4ag0805 | 1530 | PRINTS | Myosin heavy chain signature | 196 | 223 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Cone4ag0805 | 1530 | PRINTS | Myosin heavy chain signature | 429 | 457 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Cone4ag0805 | 1530 | FunFam | Myosin XI D | 735 | 784 | - | - | |
| Cone4ag0805 | 1530 | Gene3D | - | 439 | 623 | - | - | |
| Cone4ag0805 | 1530 | ProSiteProfiles | IQ motif profile. | 737 | 764 | - | - | |
| Cone4ag0805 | 1530 | FunFam | Myosin XI D | 667 | 730 | - | - | |
| Cone4ag0805 | 1530 | MobiDBLite | consensus disorder prediction | 1058 | 1115 | - | - | |
| Cone4ag0805 | 1530 | MobiDBLite | consensus disorder prediction | 1084 | 1098 | - | - | |
| Cone4ag0805 | 1530 | FunFam | Myosin heavy chain | 252 | 307 | - | - | |
| Cone4ag0805 | 1530 | Pfam | DIL domain | 1348 | 1452 | IPR002710 | - | |
| Cone4ag0805 | 1530 | MobiDBLite | consensus disorder prediction | 1099 | 1113 | - | - | |
| Cone4ag0805 | 1530 | Coils | Coil | 923 | 957 | - | - | |
| Cone4ag0805 | 1530 | PANTHER | MYOSIN | 12 | 1472 | - | GO:0000146(PANTHER)|GO:0005737(PANTHER)|GO:0007015(PANTHER)|GO:0015629(PANTHER)|GO:0030050(PANTHER)|GO:0031982(PANTHER)|GO:0051015(PANTHER) | |
| Cone4ag0805 | 1530 | ProSiteProfiles | IQ motif profile. | 806 | 835 | - | - | |
| Cone4ag0805 | 1530 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 786 | 883 | IPR027417 | - | |
| Cone4ag0805 | 1530 | ProSiteProfiles | IQ motif profile. | 854 | 883 | - | - | |
| Cone4ag0805 | 1530 | Gene3D | - | 252 | 310 | - | - | |
| Cone4ag0805 | 1530 | FunFam | Class V myosin | 439 | 587 | - | - | |
| Cone4ag0805 | 1530 | ProSiteProfiles | IQ motif profile. | 758 | 787 | - | - | |
| Cone4ag0805 | 1530 | CDD | MYSc_Myo11 | 76 | 720 | IPR036018 | - | |
| Cone4ag0805 | 1530 | FunFam | Myosin 2 | 312 | 426 | - | - | |
| Cone4ag0805 | 1530 | Pfam | Myosin N-terminal SH3-like domain | 9 | 52 | IPR004009 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Cone4ag0805 | 1530 | Coils | Coil | 996 | 1051 | - | - | |
| Cone4ag0805 | 1530 | SMART | DIL_2 | 1348 | 1455 | IPR002710 | - | |
| Cone4ag0805 | 1530 | Gene3D | Myosin VI head, motor domain, U50 subdomain | 312 | 601 | - | - | |
| Cone4ag0805 | 1530 | Gene3D | - | 667 | 733 | - | - | |
| Cone4ag0805 | 1530 | ProSiteProfiles | Myosin motor domain profile. | 62 | 732 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Cone4ag0805 | 1530 | ProSiteProfiles | Dilute domain profile. | 1162 | 1473 | IPR002710 | - | |
| Cone4ag0805 | 1530 | SMART | iq_5 | 782 | 804 | IPR000048 | GO:0005515(InterPro) | |
| Cone4ag0805 | 1530 | SMART | iq_5 | 757 | 779 | IPR000048 | GO:0005515(InterPro) | |
| Cone4ag0805 | 1530 | SMART | iq_5 | 853 | 875 | IPR000048 | GO:0005515(InterPro) | |
| Cone4ag0805 | 1530 | SMART | iq_5 | 830 | 852 | IPR000048 | GO:0005515(InterPro) | |
| Cone4ag0805 | 1530 | SMART | iq_5 | 805 | 827 | IPR000048 | GO:0005515(InterPro) | |
| Cone4ag0805 | 1530 | SMART | iq_5 | 734 | 756 | IPR000048 | GO:0005515(InterPro) | |
| Cone4ag0805 | 1530 | CDD | MyosinXI_CBD | 1113 | 1496 | IPR037975 | GO:0007015(InterPro) | |
| Cone4ag0805 | 1530 | ProSiteProfiles | IQ motif profile. | 783 | 812 | - | - | |
| Cone4ag0805 | 1530 | Pfam | Myosin head (motor domain) | 65 | 720 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Cone4ag0805 | 1530 | Gene3D | Kinesin motor domain | 65 | 662 | IPR036961 | - | |
| Cone4ag0805 | 1530 | ProSiteProfiles | Myosin N-terminal SH3-like domain profile. | 8 | 57 | IPR004009 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Cone4ag0805 | 1530 | FunFam | unconventional myosin-Va | 833 | 881 | - | - | |
| Cone4ag0805 | 1530 | SMART | MYSc_2a | 56 | 733 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Cone4ag0805 | 1530 | Gene3D | - | 735 | 784 | - | - | |
| Cone4ag0805 | 1530 | Gene3D | - | 785 | 832 | - | - | |
| Cone4ag0805 | 1530 | Gene3D | - | 833 | 882 | - | - | |
| Cone4ag0805 | 1530 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 35 | 785 | IPR027417 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cone10ag0655 | Cone-Chr10:3164573 | Cone4ag0805 | Cone-Chr4:5072247 | 0 | dispersed | |
| Cone17ag0291 | Cone-Chr17:1396636 | Cone4ag0805 | Cone-Chr4:5072247 | 0 | dispersed | |
| Cone17ag0604 | Cone-Chr17:3262558 | Cone4ag0805 | Cone-Chr4:5072247 | 0 | dispersed | |
| Cone17ag0949 | Cone-Chr17:7414370 | Cone4ag0805 | Cone-Chr4:5072247 | 0 | dispersed | |
| Cone20ag0292 | Cone-Chr20:1301520 | Cone4ag0805 | Cone-Chr4:5072247 | 0 | dispersed | |
| Cone20ag0845 | Cone-Chr20:6138631 | Cone4ag0805 | Cone-Chr4:5072247 | 0 | dispersed | |
| Cone3ag0684 | Cone-Chr3:3484010 | Cone4ag0805 | Cone-Chr4:5072247 | 0 | dispersed | |
| Cone4ag0376 | Cone-Chr4:1705561 | Cone4ag0805 | Cone-Chr4:5072247 | 0 | dispersed | |
| Cone4ag0805 | Cone-Chr4:5072247 | Cone5ag1023 | Cone-Chr5:4441363 | 1.58E-190 | dispersed | |
| Cone4ag0805 | Cone-Chr4:5072247 | Cone7ag0751 | Cone-Chr7:4601707 | 0 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cone4ag0805 | K10357 | - | csv:101204300 | 2688.29 |