Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone4ag0812 ATGCAGCCTCTCTTCTTCTACTACTTTCTCTTCTTAATTTTCTCATCAAGCAAAAGCATCAAGGTCACTGCAACTCTCACTCACAGCCGTCGGATCCTCCACAAGCCATTCTTTCCATTCGAATCTCTCCCTCCATCTCCACCCCCTTCTTCTTCACCTCCTCCTACTCCTAAATATCCATTTTCCTCAGATTCCCCTTCTACCCCTGACCCATCTCCGTTTTTCCCATCTTACCCCGCTCCTCCTCCTCCGCCCTCTTCCCCCGCCTCCTTCGCCTCCTTTCCGGCCAACATCTCCTCCCTCATTCTCCCTCACTCCTCTAAATCCTCGTCCACATCTAAGAAGCTCGTCCCCTTAGCCATTGCCGCCGTTCTCTCCGCCATCGTAGTTGTCGCCGTCGCTTCCTTCCTTTACTTCCGCCGGAGAAGACATAATCGGAACTTGGCCGACGATAAGACGTCCAGATCTGACCGCAGCAGCAGGTTATTCCACTCTTCCAATGTTGAATCTGCAAGCAATGGGAATGGAGAAATACCTCCTATTCCTAAGCTCAGAAATCCATCTGCATCTAGCTCTGAATTTCTCTACATAGGAACGTTGGTTAGTTCTAGAGGAACCGATGATCGCTCCGGTTCACGTCGAAATGGCGGCGGTGGTGGTCGGAGTAGTAGTTCTGTTAGCAGGAAAATGGACTCGCCGGAGCTCCACCCGCTGCCGCCGCTGCTAGGTAATCAGAGTGTGAAACAGAAGCCAGGAAATGGAGGAGATATGAGTATGAGTTCGACCGCAGAAGATGAAGACGAGGAGGAGTTTTACTCGCCAAAAGGCTCCCTGAGCGGAACTGGATCGGGATCTAGGAGAGTTTTCGCGGCCGTGGCAACAATGGCGGCAGCTGAGTATGATAATAAGAGCAGTAGCGAGTTGAGCAGTTGCTCTTCGTATTCAACTTCGAGCTGCTCTGCTTCTTCTCCGGCTAGGTCAGGTAGCTTGAGTCCTACTACAAGAACAAGATCTAAATCCAAATCACCTGATCAAGAAAACGATACTAGTGTGAAAGAAGAACCAGCAGATTTTAATATCGAAGAGCTATGTTCTTCTTCTTCTTGTTCAGATAATCATCATCTTCCTTCTTCTTCGCCCACTAGAATATCTAACTTTTCAGATCCACCTATTCCAGACCAACTGGACGTCATCCAAGAACATCCAGTTCAACTTCCGCCACCGCCACCGCCACCGCCACCACCACCAACAAGGCCCTGGGAAACCTCTTTTCCGGCCTTCAAGCCAATATCAAGGCTGTCTGGCCTTAGACCTCTTTTGAGTCCAACGCCAGTTGCTCTTGAAAATGAGATGAAAGTATCTTCTTCCATGGATGACTTGCCATCATGCAGTACTCCTTCTTCTAACCCTCTTGAGAATTCAGAGGATACTCCTAAGCCCAAGTTGAAGACCTTACACTGGGACAAGGTTAGAGCCAGCTCAGATCGGGAAATGGTGTGGGATCAACTCCGATCAAGCTCATTCAAATTGAATGAGGAAATGATTGAAACCTTATTCGTTGTAAACACCTCCAATTCGAAACCAAAGGACACAACTCCTCGATCAGTCCTTCTTCCATTACCAACCCAAGAGGGTAGAATTTTAGATCCCAAAAAGTCTCAAAATATTGCAATCTCTCTAAGGGCACTCAATGTAACCGTAGAGGAAGTAAGAGAAGCCCTTTTAGAAGGCAATGCGGATGTACTTGGCACAGAGCTACTTGAGAGTCTTTTGAAGATGGCTCCAAGCAAAGAAGAAGAAGGCAAGTTGAAGGAATATTCGGAAAATAATTCACCATTGAAGCTTAGTTCGGCCGAGAAATTTCTCAAGACAGTGCTGGAAGTACCTTTTGCATTTAAAAGGCTGGAAGTGATGCTCTACATGGGGAATTTCGAGTCAGAGGTTGAGTACCTCAAAAAGTCTTTCGACACTTTAGAGGCTGCATGTGAGGAATTGAGGAACAGCAGAATGTTCTTGAAGCTTCTAGAAGCTGTGCTCAAAACCGGAAACCGAATGAATGTCGGGACAAATCGTGGAGATGCCCATGCCTTCAAGCTCGACACTCTTCTCAAGCTAGTTGACGTCAGGGGCGCAGATGGAAAAACCACGCTCCTACATTTTGTCGTACAAGAAATCATAAGAACCGAAGGGGCCCGCCCATCTTCTACTTCAAACCAAATTACACCAAACCCCACCTTGAGTGAAGAAGTCAGGTGTAGGAAACTTGGCCTACAAGTAATATCCGGTATAAGTTCTGAGCTCACCAATGTGAAGAAAGCGGCTGCAATGGATTCAGATGTCCTTGCCAAAGATGTGTCCATGCTTTCTCAAGGAATAGAGGAGATGAGGAAAGTTGTGGAGTTAAATGGGGTGGAGGGATTGAATGGAGGAAGTGATGATGAATTTTTTGCATCTGTTAAAAGGTTTATGGAAATGGCCGAGGTGGAATTGATAAAAACTCAAGCTCATGAGAGTGTTGCTCTGTCTCTAGTGAAGGAGATAACAGAGTACTTTCATGGGAATTCGGCTAAAGAAGAGGCTCACCCTTTGCGAATATTCATGGTGGTGAGGGATTTTCTTGCCATTCTTGATGGGGTTTGTAAGGAAGTAGGGATGATTAATGAGAGAACTGTTGTTAGCTCTGCTTATAAATTTCCAGTTCCGGTCAATCCCACATTGCAGCATTTTAACGGGTTTCAGGCCAGGCAGAACAGCAGTTTTTCTGAAGATGAGAGTGAGTAA 2781 46.57 MQPLFFYYFLFLIFSSSKSIKVTATLTHSRRILHKPFFPFESLPPSPPPSSSPPPTPKYPFSSDSPSTPDPSPFFPSYPAPPPPPSSPASFASFPANISSLILPHSSKSSSTSKKLVPLAIAAVLSAIVVVAVASFLYFRRRRHNRNLADDKTSRSDRSSRLFHSSNVESASNGNGEIPPIPKLRNPSASSSEFLYIGTLVSSRGTDDRSGSRRNGGGGGRSSSSVSRKMDSPELHPLPPLLGNQSVKQKPGNGGDMSMSSTAEDEDEEEFYSPKGSLSGTGSGSRRVFAAVATMAAAEYDNKSSSELSSCSSYSTSSCSASSPARSGSLSPTTRTRSKSKSPDQENDTSVKEEPADFNIEELCSSSSCSDNHHLPSSSPTRISNFSDPPIPDQLDVIQEHPVQLPPPPPPPPPPPTRPWETSFPAFKPISRLSGLRPLLSPTPVALENEMKVSSSMDDLPSCSTPSSNPLENSEDTPKPKLKTLHWDKVRASSDREMVWDQLRSSSFKLNEEMIETLFVVNTSNSKPKDTTPRSVLLPLPTQEGRILDPKKSQNIAISLRALNVTVEEVREALLEGNADVLGTELLESLLKMAPSKEEEGKLKEYSENNSPLKLSSAEKFLKTVLEVPFAFKRLEVMLYMGNFESEVEYLKKSFDTLEAACEELRNSRMFLKLLEAVLKTGNRMNVGTNRGDAHAFKLDTLLKLVDVRGADGKTTLLHFVVQEIIRTEGARPSSTSNQITPNPTLSEEVRCRKLGLQVISGISSELTNVKKAAAMDSDVLAKDVSMLSQGIEEMRKVVELNGVEGLNGGSDDEFFASVKRFMEMAEVELIKTQAHESVALSLVKEITEYFHGNSAKEEAHPLRIFMVVRDFLAILDGVCKEVGMINERTVVSSAYKFPVPVNPTLQHFNGFQARQNSSFSEDESE 926
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 5157281 5161147 - Conep04aG0084500.1 Cone4ag0812 435790
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone4ag0812 926 MobiDBLite consensus disorder prediction 339 359 - -
Cone4ag0812 926 MobiDBLite consensus disorder prediction 160 174 - -
Cone4ag0812 926 MobiDBLite consensus disorder prediction 455 475 - -
Cone4ag0812 926 MobiDBLite consensus disorder prediction 216 230 - -
Cone4ag0812 926 Pfam Formin Homology 2 Domain 474 876 IPR015425 -
Cone4ag0812 926 Coils Coil 648 668 - -
Cone4ag0812 926 MobiDBLite consensus disorder prediction 361 388 - -
Cone4ag0812 926 SMART it6_source 472 891 IPR015425 -
Cone4ag0812 926 ProSiteProfiles Formin homology-2 (FH2) domain profile. 472 902 IPR015425 -
Cone4ag0812 926 PANTHER FORMIN-RELATED 13 923 IPR027643 GO:0003779(InterPro)|GO:0030036(InterPro)|GO:0045010(InterPro)|GO:0051015(InterPro)
Cone4ag0812 926 SUPERFAMILY Formin homology 2 domain (FH2 domain) 406 887 - -
Cone4ag0812 926 MobiDBLite consensus disorder prediction 299 421 - -
Cone4ag0812 926 MobiDBLite consensus disorder prediction 246 260 - -
Cone4ag0812 926 Gene3D Formin, FH2 domain 471 885 IPR042201 -
Cone4ag0812 926 MobiDBLite consensus disorder prediction 149 186 - -
Cone4ag0812 926 MobiDBLite consensus disorder prediction 299 338 - -
Cone4ag0812 926 MobiDBLite consensus disorder prediction 453 481 - -
Cone4ag0812 926 MobiDBLite consensus disorder prediction 43 86 - -
Cone4ag0812 926 MobiDBLite consensus disorder prediction 402 421 - -
Cone4ag0812 926 MobiDBLite consensus disorder prediction 204 285 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone13ag0382 Cone-Chr13:3487304 Cone4ag0812 Cone-Chr4:5157281 2.20E-84 dispersed
Cone4ag0812 Cone-Chr4:5157281 Cone6ag1454 Cone-Chr6:11632679 8.06E-156 dispersed
Cone4ag0812 Cone-Chr4:5157281 Cone7ag0764 Cone-Chr7:4752804 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone4ag0812 K28090 - sly:101254726 696.812