Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone4ag0862 ATGGCGGTGAAAGTGTATGGTATGGCGACGGCAGCCTGCCCACAGCGGGTGCTAGCTTGCCTCATTGAAAAGGGAGTTGATTTTGAGCTTGTACACGTTGACCTTCCGACCGGAGAGCAAAAGCGCTCCGACCACCTACATCTACAGCCTTTTGGACAAGTTCCAGTCATAAAAGATGGGGATCTGACCCTTTACGAATCTCGAGCAATCATGAGGTACTACGCAACCAAGTACGCTGACAGAGGACCGAACCTCCTAGGCACTACTTTGGAAGAGAAAGCTCTAGTGGACCAATGGGTCGAAGTGGAAGCGCATAATTTCAATGACCTGGCTTTCTCTATAACATTTCAGCTTGTCATCTTGCCCAAGATGGGTAAACGTGCTGACATGGAAATTGTGCACAGAAGTGAGCAAAAACTAGAAGAGGTATTGGACGTCTACAATCGACGTTTGTCAAAAGTCAACTATCTTGCGGGAGATGTATTCACACTTGCTGATCTTACCCACCTTCCTGGAATGAGATATCTCGTAGAGGATGCTAGAATGGACCACTTGATCACCCAGAGAAAGAATGTGAATGCTTGGTGGGAGAAGATTTCAAACCGTCCCGCTTGGAAGAAACTAATGAAGATTGCATCTGATTCTTAG 648 46.76 MAVKVYGMATAACPQRVLACLIEKGVDFELVHVDLPTGEQKRSDHLHLQPFGQVPVIKDGDLTLYESRAIMRYYATKYADRGPNLLGTTLEEKALVDQWVEVEAHNFNDLAFSITFQLVILPKMGKRADMEIVHRSEQKLEEVLDVYNRRLSKVNYLAGDVFTLADLTHLPGMRYLVEDARMDHLITQRKNVNAWWEKISNRPAWKKLMKIASDS 215
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 5891592 5894012 + Conep04aG0089500.1 Cone4ag0862 435840
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone4ag0862 215 SUPERFAMILY GST C-terminal domain-like 81 210 IPR036282 -
Cone4ag0862 215 SFLD Main (cytGST) 4 202 - -
Cone4ag0862 215 SFLD Glutathione Transferase (cytosolic) 4 202 IPR040079 -
Cone4ag0862 215 CDD GST_N_Phi 2 77 - -
Cone4ag0862 215 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 1 82 IPR004045 -
Cone4ag0862 215 SUPERFAMILY Thioredoxin-like 2 82 IPR036249 -
Cone4ag0862 215 CDD GST_C_Phi 91 209 IPR034347 -
Cone4ag0862 215 Pfam Glutathione S-transferase, C-terminal domain 116 203 IPR004046 -
Cone4ag0862 215 FunFam Glutathione S-transferase F2 87 209 - -
Cone4ag0862 215 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 89 215 IPR010987 -
Cone4ag0862 215 Pfam Glutathione S-transferase, N-terminal domain 1 74 IPR004045 -
Cone4ag0862 215 Gene3D Glutaredoxin 1 86 - -
Cone4ag0862 215 FunFam Glutathione S-transferase F2 2 86 - -
Cone4ag0862 215 Gene3D - 87 209 - -
Cone4ag0862 215 PANTHER GLUTATHIONE S-TRANSFERASE RHO 1 210 - GO:0004364(PANTHER)|GO:0005737(PANTHER)|GO:0006749(PANTHER)|GO:0043295(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone20ag0933 Cone-Chr20:6695594 Cone4ag0862 Cone-Chr4:5891592 4.84E-57 dispersed
Cone20ag0934 Cone-Chr20:6704638 Cone4ag0862 Cone-Chr4:5891592 1.97E-53 dispersed
Cone20ag0939 Cone-Chr20:6738860 Cone4ag0862 Cone-Chr4:5891592 8.65E-14 dispersed
Cone20ag0053 Cone-Chr20:254347 Cone4ag0862 Cone-Chr4:5891592 1.63E-63 transposed
Cone4ag0862 Cone-Chr4:5891592 Cone7ag0797 Cone-Chr7:5682528 2.69E-88 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone4ag0862 K00799 - mtr:11411339 327.405