Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone4ag0862 ATGGCGGTGAAAGTGTATGGTATGGCGACGGCAGCCTGCCCACAGCGGGTGCTAGCTTGCCTCATTGAAAAGGGAGTTGATTTTGAGCTTGTACACGTTGACCTTCCGACCGGAGAGCAAAAGCGCTCCGACCACCTACATCTACAGCCTTTTGGACAAGTTCCAGTCATAAAAGATGGGGATCTGACCCTTTACGAATCTCGAGCAATCATGAGGTACTACGCAACCAAGTACGCTGACAGAGGACCGAACCTCCTAGGCACTACTTTGGAAGAGAAAGCTCTAGTGGACCAATGGGTCGAAGTGGAAGCGCATAATTTCAATGACCTGGCTTTCTCTATAACATTTCAGCTTGTCATCTTGCCCAAGATGGGTAAACGTGCTGACATGGAAATTGTGCACAGAAGTGAGCAAAAACTAGAAGAGGTATTGGACGTCTACAATCGACGTTTGTCAAAAGTCAACTATCTTGCGGGAGATGTATTCACACTTGCTGATCTTACCCACCTTCCTGGAATGAGATATCTCGTAGAGGATGCTAGAATGGACCACTTGATCACCCAGAGAAAGAATGTGAATGCTTGGTGGGAGAAGATTTCAAACCGTCCCGCTTGGAAGAAACTAATGAAGATTGCATCTGATTCTTAG 648 46.76 MAVKVYGMATAACPQRVLACLIEKGVDFELVHVDLPTGEQKRSDHLHLQPFGQVPVIKDGDLTLYESRAIMRYYATKYADRGPNLLGTTLEEKALVDQWVEVEAHNFNDLAFSITFQLVILPKMGKRADMEIVHRSEQKLEEVLDVYNRRLSKVNYLAGDVFTLADLTHLPGMRYLVEDARMDHLITQRKNVNAWWEKISNRPAWKKLMKIASDS 215
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 5891592 5894012 + Conep04aG0089500.1 Cone4ag0862 435840

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cone4ag0862 215 SUPERFAMILY GST C-terminal domain-like 81 210 IPR036282 -
Cone4ag0862 215 SFLD Main (cytGST) 4 202 - -
Cone4ag0862 215 SFLD Glutathione Transferase (cytosolic) 4 202 IPR040079 -
Cone4ag0862 215 CDD GST_N_Phi 2 77 - -
Cone4ag0862 215 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 1 82 IPR004045 -
Cone4ag0862 215 SUPERFAMILY Thioredoxin-like 2 82 IPR036249 -
Cone4ag0862 215 CDD GST_C_Phi 91 209 IPR034347 -
Cone4ag0862 215 Pfam Glutathione S-transferase, C-terminal domain 116 203 IPR004046 -
Cone4ag0862 215 FunFam Glutathione S-transferase F2 87 209 - -
Cone4ag0862 215 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 89 215 IPR010987 -
Cone4ag0862 215 Pfam Glutathione S-transferase, N-terminal domain 1 74 IPR004045 -
Cone4ag0862 215 Gene3D Glutaredoxin 1 86 - -
Cone4ag0862 215 FunFam Glutathione S-transferase F2 2 86 - -
Cone4ag0862 215 Gene3D - 87 209 - -
Cone4ag0862 215 PANTHER GLUTATHIONE S-TRANSFERASE RHO 1 210 - GO:0004364(PANTHER)|GO:0005737(PANTHER)|GO:0006749(PANTHER)|GO:0043295(PANTHER)
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone4ag0862 K00799 - - mtr:11411339 327.405
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone20ag0933 Cone-Chr20:6695594 Cone4ag0862 Cone-Chr4:5891592 4.84E-57 dispersed
Cone20ag0934 Cone-Chr20:6704638 Cone4ag0862 Cone-Chr4:5891592 1.97E-53 dispersed
Cone20ag0939 Cone-Chr20:6738860 Cone4ag0862 Cone-Chr4:5891592 8.65E-14 dispersed
Cone20ag0053 Cone-Chr20:254347 Cone4ag0862 Cone-Chr4:5891592 1.63E-63 transposed
Cone4ag0862 Cone-Chr4:5891592 Cone7ag0797 Cone-Chr7:5682528 2.69E-88 wgd
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Cone17ag0504 . 1 209 Glutathione S-transferase Gene Family AT4G02520 59.4 5.0e-65 245.0
Cone17ag0506 . 1 209 Glutathione S-transferase Gene Family AT4G02520 59.0 1.5e-64 243.4
Cone20ag0934 . 1 209 Glutathione S-transferase Gene Family AT4G02520 59.0 5.5e-64 241.5
Cone20ag0932 . 1 205 Glutathione S-transferase Gene Family AT4G02520 56.3 4.4e-61 231.9
Cone20ag0933 . 1 205 Glutathione S-transferase Gene Family AT4G02520 56.7 2.2e-60 229.6
Cone17ag0505 . 1 205 Glutathione S-transferase Gene Family AT4G02520 54.8 1.2e-58 223.8
Cone17ag0504 . 1 210 Glutathione S-transferase Gene Family AT2G02930 59.6 3.1e-67 252.3
Cone17ag0506 . 1 210 Glutathione S-transferase Gene Family AT2G02930 59.2 2.7e-66 249.2
Cone20ag0934 . 1 210 Glutathione S-transferase Gene Family AT2G02930 59.2 1.0e-65 247.3
Cone20ag0933 . 1 208 Glutathione S-transferase Gene Family AT2G02930 58.5 1.4e-62 236.9
Cone20ag0932 . 1 208 Glutathione S-transferase Gene Family AT2G02930 56.4 1.8e-62 236.5
Cone17ag0505 . 1 208 Glutathione S-transferase Gene Family AT2G02930 56.6 7.5e-61 231.1
Cone17ag0506 . 5 203 Glutathione S-transferase Gene Family AT1G02950 57.5 1.3e-62 237.3
Cone20ag0932 . 5 206 Glutathione S-transferase Gene Family AT1G02950 55.7 6.2e-62 235.0
Cone20ag0933 . 5 211 Glutathione S-transferase Gene Family AT1G02950 53.8 8.2e-62 234.6
Cone17ag0504 . 5 205 Glutathione S-transferase Gene Family AT1G02950 55.9 1.8e-61 233.4
Cone17ag0505 . 5 206 Glutathione S-transferase Gene Family AT1G02950 53.7 1.2e-60 230.7
Cone20ag0934 . 5 205 Glutathione S-transferase Gene Family AT1G02950 55.0 7.6e-60 228.0
Cone20ag0933 . 1 205 Glutathione S-transferase Gene Family AT1G02930 59.0 2.4e-64 242.7
Cone17ag0506 . 1 210 Glutathione S-transferase Gene Family AT1G02930 56.2 1.2e-63 240.4
Cone17ag0504 . 1 210 Glutathione S-transferase Gene Family AT1G02930 56.2 1.6e-63 240.0
Cone20ag0932 . 1 205 Glutathione S-transferase Gene Family AT1G02930 57.1 1.6e-63 240.0
Cone17ag0505 . 1 205 Glutathione S-transferase Gene Family AT1G02930 57.6 6.0e-63 238.0
Cone20ag0934 . 1 210 Glutathione S-transferase Gene Family AT1G02930 55.2 2.3e-62 236.1
Cone20ag0933 . 1 205 Glutathione S-transferase Gene Family AT1G02920 59.5 1.1e-64 243.8
Cone17ag0506 . 1 210 Glutathione S-transferase Gene Family AT1G02920 56.2 9.3e-64 240.7
Cone17ag0504 . 1 210 Glutathione S-transferase Gene Family AT1G02920 56.2 1.2e-63 240.4
Cone20ag0932 . 1 205 Glutathione S-transferase Gene Family AT1G02920 57.1 1.2e-63 240.4
Cone17ag0505 . 1 205 Glutathione S-transferase Gene Family AT1G02920 58.0 2.7e-63 239.2
Cone20ag0934 . 1 210 Glutathione S-transferase Gene Family AT1G02920 55.7 1.0e-62 237.3
Cone17ag0504 . 1 213 Glutathione S-transferase Gene Family AT2G47730 55.1 2.2e-62 236.5
Cone17ag0506 . 1 213 Glutathione S-transferase Gene Family AT2G47730 55.1 2.2e-62 236.5
Cone20ag0933 . 1 213 Glutathione S-transferase Gene Family AT2G47730 55.6 1.4e-61 233.8
Cone20ag0934 . 1 213 Glutathione S-transferase Gene Family AT2G47730 53.7 3.2e-61 232.6
Cone20ag0932 . 1 213 Glutathione S-transferase Gene Family AT2G47730 54.2 7.1e-61 231.5
Cone17ag0505 . 1 213 Glutathione S-transferase Gene Family AT2G47730 54.2 3.5e-60 229.2
Cone4ag0862 . 12 208 Glutathione S-transferase Gene Family AT2G30870 51.8 1.3e-55 213.8
Cone4ag0862 . 1 213 Glutathione S-transferase Gene Family AT3G03190 56.3 5.4e-67 251.5
Cone4ag0862 . 1 213 Glutathione S-transferase Gene Family AT5G17220 54.9 2.2e-68 256.1
Cone7ag0797 . 1 140 Glutathione S-transferase Gene Family AT5G17220 55.0 4.8e-39 158.7
Cone20ag0931 . 5 226 Glutathione S-transferase Gene Family AT3G62760 59.5 1.0e-73 273.9
Cone20ag0933 . 5 210 Glutathione S-transferase Gene Family AT3G62760 51.7 1.2e-53 207.2
Cone17ag0505 . 5 210 Glutathione S-transferase Gene Family AT3G62760 51.2 1.0e-52 204.1
Cone20ag0934 . 5 209 Glutathione S-transferase Gene Family AT3G62760 51.0 9.5e-51 197.6
Cone17ag0505 . 4 213 Glutathione S-transferase Gene Family AT1G49860 50.5 4.2e-50 195.7
Cone19ag1361 . 3 218 Glutathione S-transferase Gene Family AT3G09270 58.3 4.6e-69 258.5
Cone13ag0990 . 6 219 Glutathione S-transferase Gene Family AT1G69930 54.7 5.0e-66 248.4
Cone19ag0984 . 6 219 Glutathione S-transferase Gene Family AT1G69930 54.2 1.6e-64 243.4
Cone19ag0984 . 2 218 Glutathione S-transferase Gene Family AT1G69920 50.7 6.0e-57 218.4
Cone13ag0990 . 3 218 Glutathione S-transferase Gene Family AT1G27130 51.4 9.5e-62 234.2
Cone19ag0984 . 1 218 Glutathione S-transferase Gene Family AT1G27130 50.7 4.0e-60 228.8
Cone13ag0990 . 6 218 Glutathione S-transferase Gene Family AT1G27140 50.9 3.6e-59 225.7
Cone13ag0990 . 5 225 Glutathione S-transferase Gene Family AT1G59670 55.2 8.2e-69 257.7
Cone19ag0984 . 5 225 Glutathione S-transferase Gene Family AT1G59670 54.7 2.4e-68 256.1
Cone13ag0990 . 5 226 Glutathione S-transferase Gene Family AT1G59700 57.6 5.5e-73 271.6
Cone19ag0984 . 5 226 Glutathione S-transferase Gene Family AT1G59700 57.1 3.6e-72 268.9
Cone13ag0990 . 1 218 Glutathione S-transferase Gene Family AT1G10370 70.8 7.7e-88 320.9
Cone19ag0984 . 1 226 Glutathione S-transferase Gene Family AT1G10370 69.6 2.9e-87 318.9
Cone13ag0990 . 1 226 Glutathione S-transferase Gene Family AT1G10360 65.6 6.7e-84 307.8
Cone19ag0984 . 1 226 Glutathione S-transferase Gene Family AT1G10360 65.6 2.2e-82 302.8
Cone15ag0988 . 1 215 Glutathione S-transferase Gene Family AT1G78380 73.0 5.3e-94 341.3
Cone14ag0993 . 1 216 Glutathione S-transferase Gene Family AT1G78380 74.1 2.0e-93 339.3
Cone15ag0990 . 1 216 Glutathione S-transferase Gene Family AT1G78380 66.2 1.7e-84 309.7
Cone5ag0275 . 1 219 Glutathione S-transferase Gene Family AT1G78380 58.0 1.1e-75 280.4
Cone11ag0233 . 5 218 Glutathione S-transferase Gene Family AT1G78380 57.9 5.0e-68 255.0
Cone15ag0988 . 1 216 Glutathione S-transferase Gene Family AT1G78370 68.5 9.0e-86 313.9
Cone14ag0993 . 1 214 Glutathione S-transferase Gene Family AT1G78370 68.7 5.8e-85 311.2
Cone15ag0990 . 1 214 Glutathione S-transferase Gene Family AT1G78370 63.1 6.9e-78 287.7
Cone5ag0275 . 6 205 Glutathione S-transferase Gene Family AT1G78370 58.0 1.4e-67 253.4
Cone11ag0233 . 8 218 Glutathione S-transferase Gene Family AT1G78370 55.0 1.1e-62 237.3
Cone14ag0993 . 1 214 Glutathione S-transferase Gene Family AT1G78340 65.9 2.1e-82 302.8
Cone15ag0988 . 1 214 Glutathione S-transferase Gene Family AT1G78340 64.5 4.6e-82 301.6
Cone15ag0990 . 1 214 Glutathione S-transferase Gene Family AT1G78340 60.7 7.9e-74 274.2
Cone5ag0275 . 1 205 Glutathione S-transferase Gene Family AT1G78340 56.6 2.9e-68 255.8
Cone11ag0233 . 5 219 Glutathione S-transferase Gene Family AT1G78340 55.3 1.7e-63 240.0
Cone14ag0993 . 1 214 Glutathione S-transferase Gene Family AT1G78320 57.9 4.6e-65 245.0
Cone15ag0988 . 1 214 Glutathione S-transferase Gene Family AT1G78320 56.1 5.1e-64 241.5
Cone15ag0990 . 1 214 Glutathione S-transferase Gene Family AT1G78320 50.9 3.9e-56 215.3
Cone14ag0993 . 1 219 Glutathione S-transferase Gene Family AT1G17180 70.3 1.5e-91 333.2
Cone15ag0988 . 1 218 Glutathione S-transferase Gene Family AT1G17180 68.3 7.2e-91 330.9
Cone15ag0990 . 1 219 Glutathione S-transferase Gene Family AT1G17180 62.1 5.2e-81 298.1
Cone5ag0275 . 1 219 Glutathione S-transferase Gene Family AT1G17180 56.2 2.0e-72 269.6
Cone11ag0233 . 5 223 Glutathione S-transferase Gene Family AT1G17180 56.6 3.9e-68 255.4
Cone14ag0993 . 3 217 Glutathione S-transferase Gene Family AT1G17190 61.9 2.8e-79 292.4
Cone15ag0988 . 3 217 Glutathione S-transferase Gene Family AT1G17190 60.5 2.4e-78 289.3
Cone15ag0990 . 4 217 Glutathione S-transferase Gene Family AT1G17190 58.9 6.1e-74 274.6
Cone5ag0275 . 1 218 Glutathione S-transferase Gene Family AT1G17190 53.4 6.8e-65 244.6
Cone14ag0993 . 3 214 Glutathione S-transferase Gene Family AT3G43800 59.7 4.5e-72 268.5
Cone15ag0988 . 3 214 Glutathione S-transferase Gene Family AT3G43800 56.9 1.0e-68 257.3
Cone15ag0990 . 3 214 Glutathione S-transferase Gene Family AT3G43800 52.3 7.8e-64 241.1
Cone11ag0233 . 5 219 Glutathione S-transferase Gene Family AT3G43800 50.2 3.8e-63 238.8
Cone15ag0988 . 4 218 Glutathione S-transferase Gene Family AT1G53680 58.5 4.9e-71 265.0
Cone14ag0993 . 4 219 Glutathione S-transferase Gene Family AT1G53680 57.3 6.1e-69 258.1
Cone5ag0275 . 1 219 Glutathione S-transferase Gene Family AT1G53680 55.4 8.2e-66 247.7
Cone15ag0990 . 4 219 Glutathione S-transferase Gene Family AT1G53680 55.0 8.2e-66 247.7
Cone11ag0233 . 3 223 Glutathione S-transferase Gene Family AT1G53680 58.3 1.1e-65 247.3
Cone19ag0698 . 50 217 Glutathione S-transferase Gene Family AT2G02390 63.7 2.2e-59 226.1
Cone13ag0703 . 50 216 Glutathione S-transferase Gene Family AT2G02390 58.9 3.9e-56 215.3
Cone15ag0330 . 59 195 Glutathione S-transferase Gene Family AT2G02390 54.0 2.4e-37 152.9
Cone19ag0698 . 7 217 Glutathione S-transferase Gene Family AT2G02380 63.5 8.1e-74 274.2
Cone13ag0703 . 1 216 Glutathione S-transferase Gene Family AT2G02380 59.5 2.2e-71 266.2
Cone15ag0330 . 17 195 Glutathione S-transferase Gene Family AT2G02380 55.3 1.9e-51 199.9
Cone9ag0776 . 1 244 Glutathione S-transferase Gene Family AT5G41210 65.6 3.3e-92 335.5
Cone9ag0776 . 1 250 Glutathione S-transferase Gene Family AT5G41240 62.4 7.3e-90 328.9
Cone10ag0272 . 15 233 Glutathione S-transferase Gene Family AT5G02780 70.9 7.3e-89 324.3
Cone3ag0299 . 304 530 Glutathione S-transferase Gene Family AT5G02780 64.9 1.7e-85 313.2
Cone13ag1302 . 14 232 Glutathione S-transferase Gene Family AT5G02780 65.0 2.5e-81 299.3
Cone1ag1330 . 80 297 Glutathione S-transferase Gene Family AT5G02780 63.2 1.9e-76 283.1
Cone3ag0300 . 473 658 Glutathione S-transferase Gene Family AT5G02780 57.3 8.6e-66 247.7
Cone1ag1330 . 78 298 Glutathione S-transferase Gene Family AT3G55040 66.7 2.6e-80 296.2
Cone3ag0299 . 292 531 Glutathione S-transferase Gene Family AT3G55040 59.2 9.9e-80 294.3
Cone10ag0272 . 12 236 Glutathione S-transferase Gene Family AT3G55040 60.4 9.9e-80 294.3
Cone13ag1302 . 12 232 Glutathione S-transferase Gene Family AT3G55040 58.4 2.5e-75 279.6
Cone3ag0300 . 471 662 Glutathione S-transferase Gene Family AT3G55040 50.7 5.1e-60 228.8
Cone10ag0272 . 8 233 Glutathione S-transferase Gene Family AT5G02790 71.2 1.4e-95 346.7
Cone3ag0299 . 304 532 Glutathione S-transferase Gene Family AT5G02790 69.9 4.8e-93 338.2
Cone13ag1302 . 6 232 Glutathione S-transferase Gene Family AT5G02790 67.0 3.6e-88 322.0
Cone1ag1330 . 74 299 Glutathione S-transferase Gene Family AT5G02790 63.9 4.2e-81 298.5
Cone3ag0300 . 467 661 Glutathione S-transferase Gene Family AT5G02790 59.2 6.1e-72 268.1
Cone1ag1319 . 1 213 Glutathione S-transferase Gene Family AT1G19570 70.6 1.5e-85 313.2
Cone5ag0301 . 1 205 Glutathione S-transferase Gene Family AT1G19570 66.8 1.4e-78 290.0
Cone16ag0611 . 104 311 Glutathione S-transferase Gene Family AT1G19570 59.8 5.2e-70 261.5
Cone1ag1319 . 1 212 Glutathione S-transferase Gene Family AT1G75270 74.2 2.0e-90 329.3
Cone5ag0301 . 1 204 Glutathione S-transferase Gene Family AT1G75270 70.0 6.6e-81 297.7
Cone16ag0611 . 104 311 Glutathione S-transferase Gene Family AT1G75270 63.2 2.0e-74 276.2
Cone16ag0611 . 95 311 Glutathione S-transferase Gene Family AT5G16710 76.0 6.0e-97 351.3
Cone1ag1319 . 3 211 Glutathione S-transferase Gene Family AT5G16710 62.2 3.2e-74 275.8
Cone5ag0301 . 3 203 Glutathione S-transferase Gene Family AT5G16710 59.3 1.1e-66 250.8
Cone2ag0396 . 12 242 Glutathione S-transferase Gene Family AT5G16710 50.6 7.5e-63 238.0
Cone4ag1434 . 8 217 Glutathione S-transferase Gene Family AT1G77290 65.2 1.7e-73 273.5
Cone7ag1501 . 1 114 Glutathione S-transferase Gene Family AT1G77290 66.7 1.9e-37 153.7
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0005856 2 1 2 2 1 1 1 1 1 1 1 1 1 1 1 1 1 3 1 1 1 1 1 1 0 1 1 1 1 5 38