Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone4ag0869 | ATGCATCTCGACATCGTTCATTTGTGGATTGTGATCGGCTTCCTCATCCTTCCAGTTTATTCAAAAACCAAATCCGACGATGTGTCTGCATTGAATGTCATGTATACAAGTTTGAATTCTCCTTCAGAACTTAGTAATTGGAAATCGAGTGGGGGAGATCCATGTGACGACTCTTGGAAAGGAATCAAATGTTCTGGAAATTCTGTCACTGAAATATATTTATCTGATCTTGGACTCAGTGGATCCATGGGCTACCAGCTCGCAAATCTGAAGTCTGTCAAAGTATTTGACTTAAGCAGGAACAAACTCAAGGGTGACATTCCGTATCAACTTCCTCCAAATCTGGAAACCTTAGATCTTTCCGAGAATGAGTTCACTGGCAGTGTGCCTTATTCAATTTCTCAGATGACTCAAATCCAAAACTTAAATCTTGCTAGAAACAAGCTCAGTAACCAACTAAGTGATGTGTTCGCCAAGCTTACTAAACTCAAAAAGATGGATGTCTCGCACAACTCACTGTCAGGAAATTTGCCGCAGAGTATGGAAAAACTCTCTAGCATCAAGACATTGGATTTGCAGGATAACAAATTGACTGGTTCTATCAATGTTCTTGCTCCACTTCCCCTTGAAAACTTGAACGTCGCAAACAACAGGTTCACCGGCTGGATTTCTCCCGAGGTGCAGAGTATTAATAACTTAGACACTGGAGGAAATTCTTGGTCAACTGGACCGGCTCCGCCTCCTCCACCAGGGACAAAAACTATCCATAAACTCACTAACAAAAGTGGTCCGAGCAAGAAGTCCATTGTTGGCGGAGTAATCATTGCTGCGATCGGTCTCGGTGTGTTGATGCTCATCGCACTCACGTTCATTTTACTTGCAAGACGGAGAAGATCTACGCCTTCTTCACATTTTCTTGATGAAGAAGGGCATAGCCAGAGGAGAACATTTACTCCCCTTGCATCTCAAGAACTAACAACTGATGGGCATCCAAATATCCACAAAGACTTTACCGATCCTAAGATCTTTGATTCACCAACTACAATAGATATCAAGCCGTTGCAAAAATCACCTTCAATTGGGCAGAAGACATCATCTTCTACTCGTGCTCAATCCCTTAGCGATAGTGAATTTGCCAAGCGTCTGAGTGCCAGTAGGAGCACCTCAGTCCGATTCGCAGCTTACACTCTAGCAGATTTGCAGTCTACAACAGCTAATTTTGCTCCAAGCCGACTTATAGGAGAGGGATCCATTGGACGTGTTTACAGGGCTAAATATTCTGATGGAAAGGTTTTAGCAGTGAAAAAGATAGACTCCTCGCTTTTCCAAGGCAGAAGAACAGAAGAATTTACGGAAATAGTTGCAAAAATCTCGAAACTTGACCACCCAAACATTGCAGAGCTTTTCGGTTTCTGTTTGGAACAAGGGCATCACATGTTAGTTTACGAGTACTTTAGAAACGGCTCTCTTCATGAGTTTTTGCATGCAGCTGATGATTACAGCAACCCCCTTACTTGGAATACAAGAGTCCGAATTGCTTTGGGGGCAGCTAGGGGTGTTGAGTACCTCCATGAGATTTGTTCACCATGCTTAATTCACAAGAACATCAAGTCGACAAACATTTTGCTTGATATGGAACTTAATCCTCATATTTCCGACTACGGTTTGGCAACTTTTCATCAGCGTACTAGCCAGAACCTTGGGTTAGGATATAATGCTCCAGAGTGCACAACCCCTTCTGCCTATACGGTTAAGAGCGATGTCTACAGTTTTGGAGTCGTGATGTTGGAACTGCTGACAGGTCGGATGCCTTTTGACAGCACAAAAGCGAAAGCAGAACAATGCCTTGTCCGGTGGGCCTCTCCTCTGCTCCATGACCTAGATGCTCTTGGAAGGATGGTCGACCCGGCATTGCGGGGATTGTACCCTCCCAAGTCGCTCTCCCGGTTTGCGGATATCATTGCTCTCTGCGTGCAATCGGAACCTGAATTTCGGCCCCCATTGTCGGAGGTTGTGCAAGCGTTGGTAAGGTTAGTTCAACGCTCCAGCATGAACGTAAGCAAAGAACTTGGAGCGTCTCGTAGGTCGGATGACTACGATGATTGA | 2106 | 44.49 | MHLDIVHLWIVIGFLILPVYSKTKSDDVSALNVMYTSLNSPSELSNWKSSGGDPCDDSWKGIKCSGNSVTEIYLSDLGLSGSMGYQLANLKSVKVFDLSRNKLKGDIPYQLPPNLETLDLSENEFTGSVPYSISQMTQIQNLNLARNKLSNQLSDVFAKLTKLKKMDVSHNSLSGNLPQSMEKLSSIKTLDLQDNKLTGSINVLAPLPLENLNVANNRFTGWISPEVQSINNLDTGGNSWSTGPAPPPPPGTKTIHKLTNKSGPSKKSIVGGVIIAAIGLGVLMLIALTFILLARRRRSTPSSHFLDEEGHSQRRTFTPLASQELTTDGHPNIHKDFTDPKIFDSPTTIDIKPLQKSPSIGQKTSSSTRAQSLSDSEFAKRLSASRSTSVRFAAYTLADLQSTTANFAPSRLIGEGSIGRVYRAKYSDGKVLAVKKIDSSLFQGRRTEEFTEIVAKISKLDHPNIAELFGFCLEQGHHMLVYEYFRNGSLHEFLHAADDYSNPLTWNTRVRIALGAARGVEYLHEICSPCLIHKNIKSTNILLDMELNPHISDYGLATFHQRTSQNLGLGYNAPECTTPSAYTVKSDVYSFGVVMLELLTGRMPFDSTKAKAEQCLVRWASPLLHDLDALGRMVDPALRGLYPPKSLSRFADIIALCVQSEPEFRPPLSEVVQALVRLVQRSSMNVSKELGASRRSDDYDD | 701 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 6042321 | 6046891 | + | Conep04aG0090200.1 | Cone4ag0869 | 435847 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone4ag0869 | 701 | FunFam | protein STRUBBELIG-RECEPTOR FAMILY 8 | 485 | 689 | - | - | |
Cone4ag0869 | 701 | PANTHER | LEUCINE RICH REPEAT KINASE 2 | 266 | 677 | IPR051420 | - | |
Cone4ag0869 | 701 | FunFam | protein STRUBBELIG-RECEPTOR FAMILY 3 | 24 | 251 | - | - | |
Cone4ag0869 | 701 | Gene3D | Ribonuclease Inhibitor | 24 | 261 | IPR032675 | - | |
Cone4ag0869 | 701 | SUPERFAMILY | L domain-like | 25 | 241 | - | - | |
Cone4ag0869 | 701 | ProSiteProfiles | Protein kinase domain profile. | 407 | 678 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cone4ag0869 | 701 | SUPERFAMILY | Protein kinase-like (PK-like) | 387 | 675 | IPR011009 | - | |
Cone4ag0869 | 701 | MobiDBLite | consensus disorder prediction | 350 | 372 | - | - | |
Cone4ag0869 | 701 | CDD | TM_EGFR-like | 262 | 298 | - | - | |
Cone4ag0869 | 701 | Gene3D | Transferase(Phosphotransferase) domain 1 | 485 | 689 | - | - | |
Cone4ag0869 | 701 | MobiDBLite | consensus disorder prediction | 234 | 254 | - | - | |
Cone4ag0869 | 701 | FunFam | Protein STRUBBELIG-RECEPTOR FAMILY 8 | 372 | 484 | - | - | |
Cone4ag0869 | 701 | ProSiteProfiles | Leucine-rich repeat profile. | 186 | 208 | IPR001611 | GO:0005515(InterPro) | |
Cone4ag0869 | 701 | Gene3D | Phosphorylase Kinase; domain 1 | 365 | 484 | - | - | |
Cone4ag0869 | 701 | Pfam | Protein tyrosine and serine/threonine kinase | 411 | 675 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cone4ag0869 | 701 | Pfam | Leucine Rich Repeat | 162 | 184 | IPR001611 | GO:0005515(InterPro) | |
Cone4ag0869 | 701 | Pfam | Leucine Rich Repeat | 114 | 136 | IPR001611 | GO:0005515(InterPro) | |
Cone4ag0869 | 701 | MobiDBLite | consensus disorder prediction | 322 | 372 | - | - | |
Cone4ag0869 | 701 | Pfam | Leucine rich repeat N-terminal domain | 25 | 65 | IPR013210 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone1ag0021 | Cone-Chr1:152551 | Cone4ag0869 | Cone-Chr4:6042321 | 1.26E-169 | dispersed | |
Cone4ag0869 | Cone-Chr4:6042321 | Cone7ag0827 | Cone-Chr7:6173636 | 2.76E-176 | dispersed | |
Cone20ag1372 | Cone-Chr20:8777652 | Cone4ag0869 | Cone-Chr4:6042321 | 3.68E-47 | wgd | |
Cone4ag0869 | Cone-Chr4:6042321 | Cone7ag0806 | Cone-Chr7:5899040 | 3.79E-48 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
82757 | PF01248 | Ribosomal_L7Ae | 1.20E-26 | CL0101 | Cone | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone4ag0869 | - | - | - | 0.0 |