Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone4ag0921 ATGGGCGGGAATTGGGTTAAAGAGGCGAATCCCAATTTCATCTTATTGTTTTTCCGAATATTAGCAATTTGTCACACTGCAATTCCTGAGCATAATGATGAGACAGGTGAGTTTACTTATGAAGCGGAATCACCAGATGAAGCTGCCTTTCTTGTTGCTGCTAGAGAATTTGATTTTGGGTTTTGTAAAAGGACTCAATCCACTTTGGTCGTCCGGGAAAAATATTCTCCATCAGGAGAAGCAGTTGAGAGGGAATACAAAATTTTGAATCTCTTGGACTTTACTAGCAAAAGAAAGAGAATGTCAGTGATTGTTCGGGATGAAGATGGGCAAATCTTTCTTCTTTGCAAAGGAGCCGACAGCATTATTTTTGATCGGTTGGCAAAGAATGGAAGAATGTACGAAGAAGCCACAACCCGGCACTTGAATGAATATGGAGAGGCTGGTTTAAGGACATTAGCTCTTGCTTATAAGAAGCTTGAGGAATCTGAGTATGCCAGTTGGAATGATGAGTTTCAGAAAGCTAAAACGACAATAGGAGGTGATAGGGAGGGTATGCTTGAAAAAGTATCTGATATGATGGAAAGAGAGTTGATCCTTGTAGGTGCTACTGCTGTGGAGGACAGGTTGCAAAAAGGGGTGCCACAATGCATAGATAAACTTGCTCAAGCTGGTCTCAAGATCTGGGTTTTGACTGGAGATAAGATGGAAACTGCTATCAACATAGGATTTGCATGTAGTCTACTACGACAGGGCATGAATCAGATTTGTATAACATCCAATATAGAGACAATAGCGCAAGATGGAAAATCGGACTTGAAAGAGAATATTTCAAATCAAATAACCAATGCCTCACAAATGATCAAATTAGAGAAGGACCCACATGCTGCATTTGCTTTAATTATTGACGGGAAAACTCTAACCTATGCTCTAGAGGATGATATGAAGCATCAGTTTCTCAGTTTAGCAGTTGATTGTGCTTCTGTTATTTGCTGCCGTGTCTCTCCCAAGCAGAAAGCTCTGGTTACTAGATTAGTAAAAGAAGGAACAGGTAAAACTACTTTGGCAATAGGTGATGGTGCAAATGATGTTGGAATGATTCAAGAGGCTGATATTGGTGTCGGTATTAGTGGGGTTGAAGGCATGCAGGCTGTGATGGCTAGTGATTTCTCTATTGCCCAATTCCGGTTCTTGGAGAGGCTTTTGGTAGTTCATGGACACTGGTGCTATAAGAGGATCGCCCAGATGATTTGTTATTTCTTCTACAAGAACATAGCATTTGGTCTTACCCTCTTTTACTTTGAGGCATTTACGGGGTTCTCTGGACAATCGATTTATGATGACTACTACATGCTTTCATTTAATGTGATTCTTACTTCATTGCCTGTCATTTCGCTTGGTGTTTTCGAGCAAGATGTTTCGTCCGAGGTCTGCTTACAGTTTCCCGCCTTATATCAACAAGGACCGAAAAACTTGTTCTTCGACTGGTACTGGATATTTGGGTGGATGGGGAACGGTCTCTACTCCTCCTTAATTACATTCTTCCTCAACATCATAATCTTCTACAACCAAGCCTTCCGAGCAGGGGGGCAGACTGCTGACATGGCTACCGTTGGGACCACCATGTTCACATGCATTATCTGGGCTGTCAATTGCCAGATCGCCCTCACCATGAGCCACTTCACTTGGATCCAACACCTCTTCGTCTGGGGCAGCATTGCTATGTGGTACCTTTTCATCCTCCTCTACGGCATGATCATCTCTTCTGGAAATGCCTACCACATTCTCATCGAGGCTTTGGGCCCTGCTCCTATTTATTGGGTAACCACCTTGTTGGTTACAGTTGTCTGTAATCTACCATATTTGGCGCACATTTCTTACCAAAGATGTTTCAATCCTATGGACCACCATATTATCCAAGAGATTAAATATTACAGGAAAGATGTGGAGGATCAGCATATGTGGACCCGTGAAAGGTCCAAAGCAAGGCAGAAGACCAAGATTGGGTTCACGGCTAGGGTCGATGCGAAGATCAGACATTTGAGAGGAAGGCTTCAGAAGAAGCATTCTTCCTTTGCTGAGCTTAATGTGGTCCCCTCTTCTTGA 2106 42.69 MGGNWVKEANPNFILLFFRILAICHTAIPEHNDETGEFTYEAESPDEAAFLVAAREFDFGFCKRTQSTLVVREKYSPSGEAVEREYKILNLLDFTSKRKRMSVIVRDEDGQIFLLCKGADSIIFDRLAKNGRMYEEATTRHLNEYGEAGLRTLALAYKKLEESEYASWNDEFQKAKTTIGGDREGMLEKVSDMMERELILVGATAVEDRLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMNQICITSNIETIAQDGKSDLKENISNQITNASQMIKLEKDPHAAFALIIDGKTLTYALEDDMKHQFLSLAVDCASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGVGISGVEGMQAVMASDFSIAQFRFLERLLVVHGHWCYKRIAQMICYFFYKNIAFGLTLFYFEAFTGFSGQSIYDDYYMLSFNVILTSLPVISLGVFEQDVSSEVCLQFPALYQQGPKNLFFDWYWIFGWMGNGLYSSLITFFLNIIIFYNQAFRAGGQTADMATVGTTMFTCIIWAVNCQIALTMSHFTWIQHLFVWGSIAMWYLFILLYGMIISSGNAYHILIEALGPAPIYWVTTLLVTVVCNLPYLAHISYQRCFNPMDHHIIQEIKYYRKDVEDQHMWTRERSKARQKTKIGFTARVDAKIRHLRGRLQKKHSSFAELNVVPSS 701
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 7517226 7520503 - Conep04aG0095500.1 Cone4ag0921 435899
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone4ag0921 701 FunFam Phospholipid-transporting ATPase 68 199 - -
Cone4ag0921 701 Pfam Phospholipid-translocating P-type ATPase C-terminal 385 633 IPR032630 -
Cone4ag0921 701 Pfam Cation transport ATPase (P-type) 23 127 - -
Cone4ag0921 701 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 16 647 - GO:0005886(PANTHER)|GO:0045332(PANTHER)|GO:0140326(PANTHER)
Cone4ag0921 701 FunFam Phospholipid-transporting ATPase 201 397 - -
Cone4ag0921 701 SUPERFAMILY HAD-like 194 405 IPR036412 -
Cone4ag0921 701 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 2 163 IPR023299 GO:0000166(InterPro)
Cone4ag0921 701 NCBIfam phospholipid-translocating P-type ATPase 5 641 IPR006539 GO:0000287(InterPro)|GO:0005524(InterPro)|GO:0015914(InterPro)|GO:0016020(InterPro)|GO:0140326(InterPro)
Cone4ag0921 701 NCBIfam HAD-IC family P-type ATPase 329 438 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Cone4ag0921 701 Gene3D - 202 397 IPR023214 -
Cone4ag0921 701 SUPERFAMILY Calcium ATPase, transmembrane domain M 406 623 IPR023298 -
Cone4ag0921 701 Gene3D - 39 201 IPR023299 GO:0000166(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone4ag0921 Cone-Chr4:7517226 Cone6ag0484 Cone-Chr6:2412016 5.56E-264 dispersed
Cone17ag0092 Cone-Chr17:486617 Cone4ag0921 Cone-Chr4:7517226 0 wgd
Cone4ag0921 Cone-Chr4:7517226 Cone7ag1229 Cone-Chr7:9118286 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone4ag0921 K01530 - csv:101221220 1230.31