Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone4ag0922 | ATGACTAATAGAAGAAGGTCCGGTTTCGGGCCGAGCCGTTTCTACACTTTTTCATGCCTTAGACCACATACCAATGAATCAGAGGCTTCAAATCAAACCCATGGTCCTGGATTTTCCCGAACAGTTCATTGCAACCAACCAAATCTCCATCAGAAGAAGCCATTGAAATACTGCTCGAATTTCATTTCAACCACAAAGTACAATGTACTTACCTTCTTGCCCAAGGCTCTTTTCGAGCAATTCAGGCGAGTTGCTAACTTGTACTTCCTTTTAGCAGCAATTCTCTCTTTCACACCCGTCACACCCTTCTCCCCCATGAGCATGATGGCCCCTTTAGCCTTTGTGGTTGGACTAAGTATGGCCAAAGAAGCCTTAGAGGATTGGCGACGTTTTGTCCAAGATATGAAGGTGAATCTTAGGAAAGCGTATGTTCATAAAGGTGAAGGGATTTTTGGGCATAGACCGTGGCATAAGATTCGGGTTGGAGATGTTGTCAAAGTTGAAAAGGACCAATTCTTTCCGGCTGATTTGCTTCTCTTATCGTCTAGTTATGAAGATGGTATTTGTTATGTAGAGACTATGAATTTAGATGGGGAGACAAACTTGAAAGTGAAGAGATCATTAGAAGTGACATTGTCTTTAGATGATAATGAGTCTTTCAAGGATTTTTCAGGAAAGATCCAATGTGAAGATCCCAACCCAAATCTTTACACCTTTGTGGGTAATCTTGAATATGATTTTCAAGTTTATCCTCTTGACCCTAATCAGATTCTCTTAAGAGATTCAAAGCTTAGGAATACTAGTTATGCTTATGGGGTGGTGATATTTACAGGCCATGATAGCAAAGTGATGCAAAATGCAACCAAATCACCTTCTAAAAGAAGTGGGATAGAAAGAAAAATGGATAAAATCATTTACATCCTTTTCACCCTTCTTGTAATGATCTCATTGATAAGCTCTATTGGTTTTGCCATCAAAACAAAGTACCAAATGCCGGATTGGTGGTACTTAATGCCTGAAAATACCAATAATTTATACGATCCAAAAAGGCCAGCATTATCCGGCCTTTTCCATCTAATTACTGCTCTTATTCTCTACGGATATTTAATACCCATTTCACTCTATGTCTCAATAGAAGTTGTCAAGGTTTTACAAGCCATGTTCATTAACCAAGATATTCACATGTATGATGAAGAGAGTGGAAATACAGCTCAGGCAAGGACCTCAAATTTGAATGAGGAGTTGGGTCAAGTAGATACAATCCTTTCTGATAAAACTGGTACTTTGACTTGCAATCAGATGGATTTTCTCAAGTGTTCAATTTCCGGGATTGCTTATGGTGTTCGCTCTAGTGAAGTAGAACTTGCTGCTGCCAAGCAAATGGCTATTGACCATGAAGAGAATGAGCCAGACTTTTCGAATTATCCAATGCAATCTAAGAAGGGGAAAAGAGGATCTGAAATCGAATTGCAAGAAGTAATCACTTCTGAGGGTGGTAATGGAAAAGATCAGAAAGTTTCCATATAA | 1527 | 39.23 | MTNRRRSGFGPSRFYTFSCLRPHTNESEASNQTHGPGFSRTVHCNQPNLHQKKPLKYCSNFISTTKYNVLTFLPKALFEQFRRVANLYFLLAAILSFTPVTPFSPMSMMAPLAFVVGLSMAKEALEDWRRFVQDMKVNLRKAYVHKGEGIFGHRPWHKIRVGDVVKVEKDQFFPADLLLLSSSYEDGICYVETMNLDGETNLKVKRSLEVTLSLDDNESFKDFSGKIQCEDPNPNLYTFVGNLEYDFQVYPLDPNQILLRDSKLRNTSYAYGVVIFTGHDSKVMQNATKSPSKRSGIERKMDKIIYILFTLLVMISLISSIGFAIKTKYQMPDWWYLMPENTNNLYDPKRPALSGLFHLITALILYGYLIPISLYVSIEVVKVLQAMFINQDIHMYDEESGNTAQARTSNLNEELGQVDTILSDKTGTLTCNQMDFLKCSISGIAYGVRSSEVELAAAKQMAIDHEENEPDFSNYPMQSKKGKRGSEIELQEVITSEGGNGKDQKVSI | 508 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 7520532 | 7522058 | - | Conep04aG0095600.1 | Cone4ag0922 | 435900 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone4ag0922 | 508 | SUPERFAMILY | HAD-like | 410 | 449 | IPR036412 | - | |
Cone4ag0922 | 508 | Gene3D | - | 115 | 289 | - | - | |
Cone4ag0922 | 508 | Pfam | Phospholipid-translocating ATPase N-terminal | 42 | 108 | IPR032631 | - | |
Cone4ag0922 | 508 | SUPERFAMILY | Calcium ATPase, transmembrane domain M | 55 | 416 | IPR023298 | - | |
Cone4ag0922 | 508 | NCBIfam | phospholipid-translocating P-type ATPase | 57 | 468 | IPR006539 | GO:0000287(InterPro)|GO:0005524(InterPro)|GO:0015914(InterPro)|GO:0016020(InterPro)|GO:0140326(InterPro) | |
Cone4ag0922 | 508 | FunFam | Phospholipid-transporting ATPase | 118 | 288 | - | - | |
Cone4ag0922 | 508 | MobiDBLite | consensus disorder prediction | 466 | 486 | - | - | |
Cone4ag0922 | 508 | Gene3D | - | 419 | 431 | IPR023214 | - | |
Cone4ag0922 | 508 | Gene3D | - | 432 | 453 | IPR023299 | GO:0000166(InterPro) | |
Cone4ag0922 | 508 | ProSitePatterns | E1-E2 ATPases phosphorylation site. | 424 | 430 | IPR018303 | - | |
Cone4ag0922 | 508 | PANTHER | PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE | 27 | 465 | - | GO:0005886(PANTHER)|GO:0045332(PANTHER)|GO:0140326(PANTHER) | |
Cone4ag0922 | 508 | SUPERFAMILY | Calcium ATPase, transduction domain A | 148 | 287 | IPR008250 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone4ag0922 | Cone-Chr4:7520532 | Cone6ag0484 | Cone-Chr6:2412016 | 9.03E-172 | dispersed | |
Cone4ag0922 | Cone-Chr4:7520532 | Cone7ag1229 | Cone-Chr7:9118286 | 0 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone4ag0922 | K01530 | - | vvi:100249823 | 789.645 |