Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone4ag0958 ATGATAGTTGTAGTGGTTCTTATTTTGGGGATTTTATTGGGAGGTCTTCTTTTGCTCCCTAGAAACCGCAAATCAGGGGATGCAAATGAGGTTCAGTCAAATCCTAACATAAAGACATCTCCGTCATCTAAATCCTACACGAAAGCTGAAGTGTCTCTGCATAATAAGAGAACCGATTGTTGGGTTATTATCAAGGACAAGGTGTATGATGTTACCTCATATGTGGAAGAACATCCGGGAGGAGATGCCATTCTAACACATGCTGGTGGCGATTCAACAGAAGGCTTTTTCGGGCCACAGCATGGTACTCGAGTATTCGATATAATCGATGATTTCTACATTGGAGATTTGAAGATTTATTAA 363 40.5 MIVVVVLILGILLGGLLLLPRNRKSGDANEVQSNPNIKTSPSSKSYTKAEVSLHNKRTDCWVIIKDKVYDVTSYVEEHPGGDAILTHAGGDSTEGFFGPQHGTRVFDIIDDFYIGDLKIY 120
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 8200659 8202455 + Conep04aG0099300.1 Cone4ag0958 435936

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cone4ag0958 120 MobiDBLite consensus disorder prediction 26 49 - -
Cone4ag0958 120 FunFam Sulfite oxidase, mitochondrial 41 119 - -
Cone4ag0958 120 MobiDBLite consensus disorder prediction 26 50 - -
Cone4ag0958 120 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 74 81 IPR018506 GO:0020037(InterPro)
Cone4ag0958 120 Pfam Cytochrome b5-like Heme/Steroid binding domain 47 118 IPR001199 -
Cone4ag0958 120 PANTHER CYTOCHROME B5 35 117 IPR050668 GO:0016020(PANTHER)|GO:0020037(PANTHER)|GO:0043231(PANTHER)
Cone4ag0958 120 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 43 118 IPR001199 -
Cone4ag0958 120 Gene3D - 37 119 IPR036400 -
Cone4ag0958 120 SMART Cyt_b5_2 46 118 IPR001199 -
Cone4ag0958 120 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 40 118 IPR036400 -
Cone4ag0958 120 PRINTS Cytochrome B5 signature 68 78 IPR001199 -
Cone4ag0958 120 PRINTS Cytochrome B5 signature 78 92 IPR001199 -
Cone4ag0958 120 PRINTS Cytochrome B5 signature 105 117 IPR001199 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone4ag0958 - - - - 0.0
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone4ag0958 Cone-Chr4:8200659 Cone7ag0386 Cone-Chr7:1704037 6.11E-19 dispersed
Cone4ag0958 Cone-Chr4:8200659 Cone4ag0397 Cone-Chr4:1806930 4.32E-19 transposed
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Cone1ag1008 . 1 134 NADPH P450 reductases AT5G53560 73.1 1.1e-54 209.9
Cone5ag0716 . 1 168 NADPH P450 reductases AT5G53560 58.3 2.4e-49 192.2
Cone7ag0386 . 1 133 NADPH P450 reductases AT5G53560 64.7 1.1e-46 183.3
Cone4ag0397 . 1 133 NADPH P450 reductases AT5G53560 64.7 1.9e-46 182.6
Cone14ag0449 . 1 133 NADPH P450 reductases AT5G53560 56.7 1.4e-41 166.4
Cone15ag0479 . 1 133 NADPH P450 reductases AT5G53560 52.2 1.6e-37 152.9
Cone4ag0397 . 1 133 NADPH P450 reductases AT5G48810 65.2 7.4e-49 190.7
Cone7ag0386 . 1 133 NADPH P450 reductases AT5G48810 65.2 1.3e-48 189.9
Cone1ag1008 . 1 135 NADPH P450 reductases AT5G48810 62.0 5.0e-45 177.9
Cone18ag0994 . 1 135 NADPH P450 reductases AT5G48810 55.9 6.3e-40 161.0
Cone14ag0449 . 1 133 NADPH P450 reductases AT5G48810 53.7 2.4e-39 159.1
Cone7ag0386 . 22 133 NADPH P450 reductases AT2G32720 80.4 1.6e-48 189.5
Cone4ag0397 . 22 133 NADPH P450 reductases AT2G32720 79.5 4.6e-48 188.0
Cone1ag1008 . 22 133 NADPH P450 reductases AT2G32720 63.4 2.8e-37 152.1
Cone4ag0958 . 1 117 NADPH P450 reductases AT1G60660 60.0 4.3e-37 151.4
Cone9ag0531 . 1 130 NADPH P450 reductases AT1G26340 59.7 5.5e-41 164.5
Cone3ag0519 . 2 281 NADPH P450 reductases AT5G17770 80.4 9.1e-131 463.8
Cone10ag0494 . 3 281 NADPH P450 reductases AT5G17770 81.0 2.2e-129 459.1
Cone5ag1478 . 8 278 NADPH P450 reductases AT5G17770 76.4 8.2e-124 440.7
Cone1ag0382 . 8 278 NADPH P450 reductases AT5G17770 77.1 5.3e-123 438.0
Cone1ag1008 . 1 134 NADPH P450 reductases AT5G53560 73.1 1.1e-54 209.9
Cone5ag0716 . 1 168 NADPH P450 reductases AT5G53560 58.3 2.4e-49 192.2
Cone7ag0386 . 1 133 NADPH P450 reductases AT5G53560 64.7 1.1e-46 183.3
Cone4ag0397 . 1 133 NADPH P450 reductases AT5G53560 64.7 1.9e-46 182.6
Cone14ag0449 . 1 133 NADPH P450 reductases AT5G53560 56.7 1.4e-41 166.4
Cone15ag0479 . 1 133 NADPH P450 reductases AT5G53560 52.2 1.6e-37 152.9
Cone4ag0397 . 1 133 NADPH P450 reductases AT5G48810 65.2 7.4e-49 190.7
Cone7ag0386 . 1 133 NADPH P450 reductases AT5G48810 65.2 1.3e-48 189.9
Cone1ag1008 . 1 135 NADPH P450 reductases AT5G48810 62.0 5.0e-45 177.9
Cone18ag0994 . 1 135 NADPH P450 reductases AT5G48810 55.9 6.3e-40 161.0
Cone14ag0449 . 1 133 NADPH P450 reductases AT5G48810 53.7 2.4e-39 159.1
Cone7ag0386 . 22 133 NADPH P450 reductases AT2G32720 80.4 1.6e-48 189.5
Cone4ag0397 . 22 133 NADPH P450 reductases AT2G32720 79.5 4.6e-48 188.0
Cone1ag1008 . 22 133 NADPH P450 reductases AT2G32720 63.4 2.8e-37 152.1
Cone4ag0958 . 1 117 NADPH P450 reductases AT1G60660 60.0 4.3e-37 151.4
Cone9ag0531 . 1 130 NADPH P450 reductases AT1G26340 59.7 5.5e-41 164.5
Cone3ag0519 . 2 281 NADPH P450 reductases AT5G17770 80.4 9.1e-131 463.8
Cone10ag0494 . 3 281 NADPH P450 reductases AT5G17770 81.0 2.2e-129 459.1
Cone5ag1478 . 8 278 NADPH P450 reductases AT5G17770 76.4 8.2e-124 440.7
Cone1ag0382 . 8 278 NADPH P450 reductases AT5G17770 77.1 5.3e-123 438.0
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0013319 0 3 0 0 0 1 1 1 1 1 1 1 1 1 0 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 27